Literature DB >> 23476323

Poly[(μ6-4-amino-3,5,6-trichloro-pyridine-2-carboxyl-ato)aqua-caesium].

Graham Smith1.   

Abstract

In the structure of the title complex, [Cs(C6H2Cl3N2O2)(H2O)] n , the caesium salt of the commercial herbicide picloram, the Cs(+) cation lies on a crystallographic mirror plane, which also contains the coordinating water mol-ecule and all non-H atoms of the 4-amino-3,5,6-trichloro-picolinate anion except the carboxyl-ate O-atom donors. The irregular CsCl4O5 coordination polyhedron comprises chlorine donors from the ortho-related ring substituents of the picloramate ligand in a bidentate chelate mode, with a third chlorine bridging [Cs-Cl range 3.6052 (11)-3.7151 (11) Å] as well as a bidentate chelate carboxyl-ate group giving sheets extending parallel to (010). A three-dimensional coordination polymer structure is generated through the carboxyl-ate group, which also bridges the sheets down [010]. Within the structure, there are intra-unit water O-H⋯Ocarboxyl-ate and amine N-H⋯Npyridine hydrogen-bonding inter-actions.

Entities:  

Year:  2012        PMID: 23476323      PMCID: PMC3588279          DOI: 10.1107/S1600536812049562

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on picloram, see: Mullinson (1985 ▶); O’Neil (2001 ▶). For examples of structures of metal complexes with picloram, see: Smith et al. (1981a ▶,b ▶); O’Reilly et al. (1983 ▶). For another structure with caesium cations involving coordinating carbon-bound Cl, see: Levitskaia et al. (2000 ▶). For a caesium complex with dipicolinic acid, see: Santra et al. (2011 ▶).

Experimental

Crystal data

[Cs(C6H2Cl3N2O2)(H2O)] M = 391.37 Monoclinic, a = 7.0816 (3) Å b = 6.6863 (2) Å c = 11.7382 (5) Å β = 101.005 (4)° V = 545.58 (4) Å3 Z = 2 Mo Kα radiation μ = 4.11 mm−1 T = 200 K 0.25 × 0.20 × 0.08 mm

Data collection

Oxford Diffraction Gemini-S CCD detector diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.67, T max = 0.98 3773 measured reflections 1164 independent reflections 1118 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.053 S = 0.98 1164 reflections 89 parameters H-atom parameters constrained Δρmax = 0.55 e Å−3 Δρmin = −0.56 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 2012 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812049562/wm2705sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812049562/wm2705Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cs(C6H2Cl3N2O2)(H2O)]F(000) = 368
Mr = 391.37Dx = 2.382 Mg m3
Monoclinic, P21/mMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybCell parameters from 3047 reflections
a = 7.0816 (3) Åθ = 3.5–28.7°
b = 6.6863 (2) ŵ = 4.11 mm1
c = 11.7382 (5) ÅT = 200 K
β = 101.005 (4)°Plate, colourless
V = 545.58 (4) Å30.25 × 0.20 × 0.08 mm
Z = 2
Oxford Diffraction Gemini-S CCD detector diffractometer1164 independent reflections
Radiation source: Enhance Mo X-ray source1118 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.5°
ω scansh = −8→7
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −8→8
Tmin = 0.67, Tmax = 0.98l = −11→14
3773 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.021H-atom parameters constrained
wR(F2) = 0.053w = 1/[σ2(Fo2) + (0.0338P)2 + 0.1378P] where P = (Fo2 + 2Fc2)/3
S = 0.98(Δ/σ)max = 0.001
1164 reflectionsΔρmax = 0.55 e Å3
89 parametersΔρmin = −0.56 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008) within WinGX (Farrugia, 2012), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0132 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cs10.29271 (3)0.25000.885412 (19)0.02831 (13)
Cl3−0.06235 (13)0.25000.12344 (9)0.0326 (2)
Cl5−0.01008 (14)0.25000.58974 (9)0.0291 (2)
Cl60.44747 (14)0.25000.61009 (9)0.0335 (2)
O1W−0.1573 (4)0.25000.8385 (3)0.0433 (8)
H11W−0.23870.14250.83350.065*
O210.4110 (3)0.0836 (3)0.14016 (17)0.0369 (5)
N10.3823 (4)0.25000.3865 (3)0.0223 (6)
N4−0.2153 (5)0.25000.3441 (3)0.0380 (8)
H41−0.28700.25000.29080.046*
H42−0.27000.25000.39680.046*
C20.2692 (5)0.25000.2807 (3)0.0211 (7)
C30.0719 (5)0.25000.2649 (3)0.0230 (7)
C4−0.0239 (5)0.25000.3586 (3)0.0241 (8)
C50.0961 (5)0.25000.4690 (3)0.0224 (7)
C60.2937 (5)0.25000.4763 (3)0.0221 (7)
C210.3725 (5)0.25000.1780 (3)0.0253 (8)
U11U22U33U12U13U23
Cs10.02573 (17)0.03285 (17)0.02648 (18)0.0000.00536 (11)0.000
Cl30.0204 (5)0.0427 (5)0.0316 (5)0.000−0.0029 (4)0.000
Cl50.0277 (5)0.0283 (5)0.0359 (5)0.0000.0172 (4)0.000
Cl60.0263 (5)0.0492 (6)0.0243 (5)0.0000.0034 (4)0.000
O1W0.0298 (16)0.0423 (17)0.056 (2)0.0000.0042 (15)0.000
O210.0456 (12)0.0340 (11)0.0352 (12)0.0137 (9)0.0178 (10)0.0035 (9)
N10.0173 (15)0.0238 (15)0.0266 (17)0.0000.0061 (12)0.000
N40.0158 (16)0.058 (2)0.041 (2)0.0000.0076 (14)0.000
C20.0187 (17)0.0181 (16)0.027 (2)0.0000.0048 (14)0.000
C30.0169 (17)0.0240 (17)0.027 (2)0.0000.0008 (15)0.000
C40.0164 (17)0.0187 (16)0.037 (2)0.0000.0052 (15)0.000
C50.0198 (17)0.0196 (16)0.030 (2)0.0000.0116 (15)0.000
C60.0194 (17)0.0216 (16)0.0243 (19)0.0000.0020 (14)0.000
C210.0149 (16)0.036 (2)0.0238 (19)0.0000.0002 (14)0.000
Cs1—Cl53.7151 (11)O1W—H11W0.9200
Cs1—Cl63.6052 (11)O1W—H11Wvii0.9200
Cs1—O1W3.129 (3)N1—C21.343 (5)
Cs1—O21i3.116 (2)N1—C61.326 (5)
Cs1—O21ii3.116 (2)N4—C41.333 (5)
Cs1—O21iii3.150 (2)N4—H420.7900
Cs1—O21iv3.150 (2)N4—H410.7300
Cs1—Cl3v3.7127 (4)C2—C31.374 (5)
Cs1—Cl3vi3.7127 (4)C2—C211.525 (5)
Cl5—C51.727 (4)C3—C41.398 (5)
Cl6—C61.732 (4)C3—Cl31.749 (4)
C21—O211.247 (3)C4—C51.408 (5)
C21—O21vii1.247 (3)C5—C61.386 (5)
Cl5—Cs1—Cl651.87 (2)Cl3vi—Cs1—O21iii75.19 (4)
Cl5—Cs1—O1W56.55 (7)O21i—Cs1—O21ii91.43 (5)
Cl5—Cs1—O21iv152.65 (4)O21i—Cs1—O21iii77.10 (5)
Cl3v—Cs1—Cl578.56 (2)O21ii—Cs1—O21iii106.40 (5)
Cl3vi—Cs1—Cl578.56 (2)Cs1v—Cl3—C3100.54 (5)
Cl5—Cs1—O21i100.91 (4)Cs1vi—Cl3—C3100.54 (5)
Cl5—Cs1—O21ii100.91 (4)Cs1v—Cl3—Cs1vi128.44 (3)
Cl5—Cs1—O21iii152.65 (4)Cs1—Cl5—C5120.18 (13)
Cl6—Cs1—O1W108.42 (7)Cs1—Cl6—C6124.53 (13)
Cl6—Cs1—O21iv141.22 (4)Cs1viii—O21—Cs1ix102.90 (6)
Cl3v—Cs1—Cl6100.49 (2)Cs1—O1W—H11W128.00
Cl3vi—Cs1—Cl6100.49 (2)Cs1—O1W—H11Wvii128.00
Cl6—Cs1—O21i65.68 (4)H11W—O1W—H11Wvii103.00
Cl6—Cs1—O21ii65.68 (4)C2—N1—C6116.5 (3)
Cl6—Cs1—O21iii141.22 (4)C4—N4—H41130.00
O1W—Cs1—O21iv104.15 (7)H41—N4—H42108.00
Cl3v—Cs1—O1W64.39 (1)C4—N4—H42123.00
Cl3vi—Cs1—O1W64.39 (1)N1—C2—C21116.1 (3)
O1W—Cs1—O21i131.69 (4)N1—C2—C3122.4 (3)
O1W—Cs1—O21ii131.69 (4)C3—C2—C21121.5 (3)
O1W—Cs1—O21iii104.15 (7)C2—C3—C4121.8 (3)
Cl3v—Cs1—O21iv75.19 (4)Cl3—C3—C2118.9 (3)
Cl3vi—Cs1—O21iv112.36 (4)Cl3—C3—C4119.3 (3)
O21iv—Cs1—O21i106.40 (5)N4—C4—C5122.5 (3)
O21iv—Cs1—O21ii77.10 (5)C3—C4—C5115.2 (3)
O21iv—Cs1—O21iii41.36 (5)N4—C4—C3122.3 (3)
Cl3v—Cs1—Cl3vi128.44 (2)C4—C5—C6118.8 (3)
Cl3v—Cs1—O21i160.44 (4)Cl5—C5—C4118.4 (3)
Cl3v—Cs1—O21ii69.70 (4)Cl5—C5—C6122.8 (3)
Cl3v—Cs1—O21iii112.36 (4)Cl6—C6—C5120.6 (3)
Cl3vi—Cs1—O21i69.70 (4)Cl6—C6—N1114.2 (3)
Cl3vi—Cs1—O21ii160.44 (4)N1—C6—C5125.2 (3)
Cl6—Cs1—Cl5—C50.00 (1)C21—C2—C3—C4180.00 (1)
O1W—Cs1—Cl5—C5180.00 (1)N1—C2—C21—O2189.9 (3)
Cl5—Cs1—Cl6—C60.00 (1)C3—C2—C21—O21−90.1 (3)
O1W—Cs1—Cl6—C60.00 (1)Cl3—C3—C4—N40.00 (1)
Cs1—Cl5—C5—C4180.00 (1)Cl3—C3—C4—C5180.00 (1)
Cs1—Cl5—C5—C60.00 (1)C2—C3—C4—N4180.00 (1)
Cs1—Cl6—C6—N1180.00 (1)C2—C3—C4—C50.00 (1)
Cs1—Cl6—C6—C50.00 (1)N4—C4—C5—Cl50.00 (1)
C6—N1—C2—C30.00 (1)N4—C4—C5—C6180.00 (1)
C6—N1—C2—C21180.00 (1)C3—C4—C5—Cl5180.00 (1)
C2—N1—C6—Cl6180.00 (1)C3—C4—C5—C60.00 (1)
C2—N1—C6—C50.00 (1)Cl5—C5—C6—Cl60.00 (1)
N1—C2—C3—Cl3180.00 (1)Cl5—C5—C6—N1180.00 (1)
N1—C2—C3—C40.00 (1)C4—C5—C6—Cl6180.00 (1)
C21—C2—C3—Cl30.00 (1)C4—C5—C6—N10.00 (1)
D—H···AD—HH···AD···AD—H···A
O1W—H11W···O21x0.922.002.905 (3)168
N4—H42···N1xi0.792.442.985 (5)127
N4—H42···Cl50.792.632.971 (4)108
N4—H41···Cl30.732.752.992 (4)102
Table 1

Selected bond lengths (Å)

Cs1—Cl53.7151 (11)
Cs1—Cl63.6052 (11)
Cs1—O1W 3.129 (3)
Cs1—O21i 3.116 (2)
Cs1—O21ii 3.116 (2)
Cs1—O21iii 3.150 (2)
Cs1—O21iv 3.150 (2)
Cs1—Cl3v 3.7127 (4)
Cs1—Cl3vi 3.7127 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H11W⋯O21vii 0.922.002.905 (3)168
N4—H42⋯N1viii 0.792.442.985 (5)127

Symmetry codes: (vii) ; (viii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  2 in total

1.  Crystal structure of poly[[di-μ2-aqua-aqua-sodium] 4-amino-3,5,6-tri-chloro-pyridine-2-carboxyl-ate trihydrate], the sodium salt of the herbicide picloram.

Authors:  Graham Smith
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-07-15

2.  Poly[μ-aqua-μ5-[2-(2,3,6-tri-chloro-phenyl)acetato]-caesium].

Authors:  Graham Smith
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-06
  2 in total

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