| Literature DB >> 23476259 |
Kaliyaperumal Thanigaimani1, Nuridayanti Che Khalib, Suhana Arshad, Ibrahim Abdul Razak.
Abstract
In the 4-meth-oxy-quinoline-2-carboxyl-ate anion of the title salt, C5H8N3(+)·C11H8NO3(-), the dihedral angle between the quinoline ring system and the carboxyl-ate group is 16.54 (15)°. In the crystal, the cations and anions are linked via N-H⋯O and N-H⋯N hydrogen bonds, forming a centrosymmetric 2 + 2 aggregate with R2(2)(9) and R4(2)(8) ring motifs. These units are further connected via N-H⋯O hydrogen bonds into a layer parallel to the bc plane. The crystal structure is also stabilized by weak C-H⋯O hydrogen bonds and π-π inter-actions between pyridine rings [centroid-centroid distance = 3.5886 (8) Å] and between pyridine and benzene rings [centroid-centroid distance = 3.6328 (8) Å].Entities:
Year: 2012 PMID: 23476259 PMCID: PMC3589023 DOI: 10.1107/S1600536812047642
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H8N3+·C11H8NO3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4575 reflections |
| θ = 2.7–31.3° | |
| µ = 0.10 mm−1 | |
| β = 128.806 (4)° | Block, brown |
| 0.24 × 0.21 × 0.11 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 4820 independent reflections |
| Radiation source: fine-focus sealed tube | 3806 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 31.4°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 17919 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4820 reflections | (Δ/σ)max < 0.001 |
| 229 parameters | Δρmax = 0.54 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.05026 (9) | 0.82361 (12) | 0.41897 (6) | 0.02018 (19) | |
| O2 | 0.57301 (9) | 0.98701 (12) | 0.31851 (6) | 0.02111 (19) | |
| O3 | 0.59315 (10) | 0.93999 (14) | 0.43875 (7) | 0.0273 (2) | |
| N1 | 0.82921 (10) | 0.75610 (13) | 0.51232 (6) | 0.0165 (2) | |
| C1 | 0.96096 (11) | 0.69323 (14) | 0.55691 (7) | 0.0157 (2) | |
| C2 | 1.02304 (12) | 0.60542 (16) | 0.63772 (8) | 0.0195 (2) | |
| H2A | 0.9720 | 0.5869 | 0.6583 | 0.023* | |
| C3 | 1.15663 (13) | 0.54699 (16) | 0.68650 (8) | 0.0214 (2) | |
| H3A | 1.1969 | 0.4874 | 0.7403 | 0.026* | |
| C4 | 1.23432 (12) | 0.57458 (16) | 0.65750 (8) | 0.0222 (2) | |
| H4A | 1.3269 | 0.5347 | 0.6921 | 0.027* | |
| C5 | 1.17713 (12) | 0.65876 (16) | 0.57956 (8) | 0.0193 (2) | |
| H5A | 1.2303 | 0.6772 | 0.5605 | 0.023* | |
| C6 | 1.03897 (11) | 0.71840 (15) | 0.52728 (7) | 0.0159 (2) | |
| C7 | 0.97352 (11) | 0.80680 (15) | 0.44581 (8) | 0.0156 (2) | |
| C8 | 0.84151 (11) | 0.87022 (15) | 0.40172 (7) | 0.0156 (2) | |
| H8A | 0.7961 | 0.9300 | 0.3474 | 0.019* | |
| C9 | 0.77543 (11) | 0.84423 (15) | 0.43910 (7) | 0.0151 (2) | |
| C10 | 0.63500 (12) | 0.92902 (15) | 0.39471 (8) | 0.0167 (2) | |
| C11 | 0.98637 (14) | 0.90182 (19) | 0.33460 (9) | 0.0239 (3) | |
| H11A | 1.0535 | 0.9092 | 0.3239 | 0.036* | |
| H11B | 0.9545 | 1.0180 | 0.3339 | 0.036* | |
| H11C | 0.9075 | 0.8316 | 0.2884 | 0.036* | |
| N2 | 0.69022 (11) | 0.60036 (14) | 0.56941 (7) | 0.0186 (2) | |
| N3 | 0.61802 (11) | 0.86007 (14) | 0.58672 (7) | 0.0187 (2) | |
| N4 | 0.53416 (12) | 0.68143 (16) | 0.67353 (8) | 0.0242 (2) | |
| C12 | 0.63244 (11) | 0.68819 (15) | 0.59866 (7) | 0.0156 (2) | |
| C13 | 0.59474 (11) | 0.59571 (16) | 0.64456 (7) | 0.0169 (2) | |
| C14 | 0.62055 (13) | 0.41992 (16) | 0.65640 (8) | 0.0205 (2) | |
| H14A | 0.5978 | 0.3557 | 0.6873 | 0.025* | |
| C15 | 0.67973 (13) | 0.33474 (17) | 0.62363 (9) | 0.0230 (3) | |
| H15A | 0.6954 | 0.2138 | 0.6316 | 0.028* | |
| C16 | 0.71448 (13) | 0.42631 (16) | 0.58045 (8) | 0.0222 (2) | |
| H16A | 0.7550 | 0.3702 | 0.5583 | 0.027* | |
| H1 | 0.5578 (18) | 0.916 (2) | 0.5893 (11) | 0.026 (4)* | |
| H2 | 0.6256 (18) | 0.899 (2) | 0.5461 (11) | 0.025 (4)* | |
| H3 | 0.7185 (18) | 0.663 (2) | 0.5421 (12) | 0.032 (5)* | |
| H4 | 0.5352 (19) | 0.630 (2) | 0.7151 (12) | 0.032 (5)* | |
| H5 | 0.525 (2) | 0.795 (3) | 0.6708 (13) | 0.041 (5)* |
| O1 | 0.0191 (4) | 0.0250 (4) | 0.0228 (4) | 0.0005 (3) | 0.0162 (4) | 0.0014 (3) |
| O2 | 0.0206 (4) | 0.0255 (5) | 0.0171 (4) | 0.0057 (3) | 0.0118 (3) | 0.0008 (3) |
| O3 | 0.0298 (5) | 0.0345 (5) | 0.0303 (5) | 0.0146 (4) | 0.0251 (4) | 0.0128 (4) |
| N1 | 0.0184 (4) | 0.0158 (4) | 0.0181 (4) | 0.0026 (3) | 0.0128 (4) | 0.0007 (3) |
| C1 | 0.0179 (5) | 0.0139 (5) | 0.0172 (5) | 0.0012 (4) | 0.0119 (4) | −0.0007 (4) |
| C2 | 0.0222 (5) | 0.0188 (5) | 0.0184 (5) | 0.0021 (4) | 0.0132 (5) | 0.0010 (4) |
| C3 | 0.0217 (5) | 0.0193 (6) | 0.0169 (5) | 0.0013 (4) | 0.0090 (4) | 0.0009 (4) |
| C4 | 0.0161 (5) | 0.0196 (6) | 0.0229 (6) | 0.0010 (4) | 0.0083 (5) | −0.0010 (4) |
| C5 | 0.0158 (5) | 0.0183 (5) | 0.0226 (6) | −0.0006 (4) | 0.0114 (4) | −0.0026 (4) |
| C6 | 0.0159 (5) | 0.0139 (5) | 0.0180 (5) | −0.0003 (4) | 0.0107 (4) | −0.0024 (4) |
| C7 | 0.0167 (5) | 0.0151 (5) | 0.0189 (5) | −0.0021 (4) | 0.0130 (4) | −0.0028 (4) |
| C8 | 0.0174 (5) | 0.0151 (5) | 0.0165 (5) | 0.0003 (4) | 0.0117 (4) | −0.0007 (4) |
| C9 | 0.0171 (5) | 0.0142 (5) | 0.0165 (5) | 0.0013 (4) | 0.0117 (4) | −0.0009 (4) |
| C10 | 0.0182 (5) | 0.0155 (5) | 0.0197 (5) | 0.0020 (4) | 0.0136 (4) | 0.0005 (4) |
| C11 | 0.0258 (6) | 0.0296 (7) | 0.0236 (6) | 0.0015 (5) | 0.0191 (5) | 0.0027 (5) |
| N2 | 0.0216 (5) | 0.0197 (5) | 0.0207 (5) | 0.0027 (4) | 0.0162 (4) | 0.0017 (4) |
| N3 | 0.0231 (5) | 0.0176 (5) | 0.0226 (5) | 0.0035 (4) | 0.0178 (4) | 0.0037 (4) |
| N4 | 0.0329 (6) | 0.0248 (6) | 0.0300 (6) | 0.0098 (4) | 0.0271 (5) | 0.0095 (4) |
| C12 | 0.0149 (4) | 0.0183 (5) | 0.0146 (5) | 0.0021 (4) | 0.0097 (4) | 0.0010 (4) |
| C13 | 0.0158 (5) | 0.0205 (5) | 0.0159 (5) | 0.0015 (4) | 0.0107 (4) | 0.0023 (4) |
| C14 | 0.0218 (5) | 0.0195 (5) | 0.0231 (6) | 0.0013 (4) | 0.0154 (5) | 0.0038 (4) |
| C15 | 0.0254 (6) | 0.0174 (5) | 0.0260 (6) | 0.0029 (4) | 0.0160 (5) | 0.0017 (5) |
| C16 | 0.0263 (6) | 0.0197 (6) | 0.0237 (6) | 0.0049 (4) | 0.0172 (5) | 0.0004 (5) |
| O1—C7 | 1.3509 (13) | C9—C10 | 1.5284 (15) |
| O1—C11 | 1.4351 (15) | C11—H11A | 0.9800 |
| O2—C10 | 1.2501 (14) | C11—H11B | 0.9800 |
| O3—C10 | 1.2537 (14) | C11—H11C | 0.9800 |
| N1—C9 | 1.3227 (15) | N2—C12 | 1.3475 (15) |
| N1—C1 | 1.3755 (14) | N2—C16 | 1.3688 (16) |
| C1—C2 | 1.4179 (16) | N2—H3 | 0.936 (18) |
| C1—C6 | 1.4185 (16) | N3—C12 | 1.3441 (15) |
| C2—C3 | 1.3743 (17) | N3—H1 | 0.893 (18) |
| C2—H2A | 0.9500 | N3—H2 | 0.905 (17) |
| C3—C4 | 1.4073 (19) | N4—C13 | 1.3634 (16) |
| C3—H3A | 0.9500 | N4—H4 | 0.893 (18) |
| C4—C5 | 1.3712 (18) | N4—H5 | 0.88 (2) |
| C4—H4A | 0.9500 | C12—C13 | 1.4337 (16) |
| C5—C6 | 1.4174 (15) | C13—C14 | 1.3848 (17) |
| C5—H5A | 0.9500 | C14—C15 | 1.4041 (18) |
| C6—C7 | 1.4242 (16) | C14—H14A | 0.9500 |
| C7—C8 | 1.3808 (15) | C15—C16 | 1.3606 (19) |
| C8—C9 | 1.4121 (16) | C15—H15A | 0.9500 |
| C8—H8A | 0.9500 | C16—H16A | 0.9500 |
| C7—O1—C11 | 117.67 (9) | O3—C10—C9 | 117.34 (10) |
| C9—N1—C1 | 117.42 (10) | O1—C11—H11A | 109.5 |
| N1—C1—C2 | 118.35 (10) | O1—C11—H11B | 109.5 |
| N1—C1—C6 | 122.84 (10) | H11A—C11—H11B | 109.5 |
| C2—C1—C6 | 118.76 (10) | O1—C11—H11C | 109.5 |
| C3—C2—C1 | 120.42 (11) | H11A—C11—H11C | 109.5 |
| C3—C2—H2A | 119.8 | H11B—C11—H11C | 109.5 |
| C1—C2—H2A | 119.8 | C12—N2—C16 | 123.66 (11) |
| C2—C3—C4 | 120.61 (11) | C12—N2—H3 | 117.9 (11) |
| C2—C3—H3A | 119.7 | C16—N2—H3 | 118.4 (11) |
| C4—C3—H3A | 119.7 | C12—N3—H1 | 119.7 (11) |
| C5—C4—C3 | 120.36 (11) | C12—N3—H2 | 113.9 (11) |
| C5—C4—H4A | 119.8 | H1—N3—H2 | 116.0 (16) |
| C3—C4—H4A | 119.8 | C13—N4—H4 | 117.5 (12) |
| C4—C5—C6 | 120.27 (11) | C13—N4—H5 | 122.8 (13) |
| C4—C5—H5A | 119.9 | H4—N4—H5 | 115.1 (17) |
| C6—C5—H5A | 119.9 | N3—C12—N2 | 118.40 (11) |
| C5—C6—C1 | 119.56 (11) | N3—C12—C13 | 122.85 (11) |
| C5—C6—C7 | 123.07 (11) | N2—C12—C13 | 118.68 (11) |
| C1—C6—C7 | 117.36 (10) | N4—C13—C14 | 122.73 (11) |
| O1—C7—C8 | 125.32 (11) | N4—C13—C12 | 119.69 (11) |
| O1—C7—C6 | 115.32 (10) | C14—C13—C12 | 117.57 (11) |
| C8—C7—C6 | 119.35 (10) | C13—C14—C15 | 121.28 (11) |
| C7—C8—C9 | 118.56 (10) | C13—C14—H14A | 119.4 |
| C7—C8—H8A | 120.7 | C15—C14—H14A | 119.4 |
| C9—C8—H8A | 120.7 | C16—C15—C14 | 119.68 (12) |
| N1—C9—C8 | 124.34 (10) | C16—C15—H15A | 120.2 |
| N1—C9—C10 | 117.26 (10) | C14—C15—H15A | 120.2 |
| C8—C9—C10 | 118.36 (10) | C15—C16—N2 | 119.11 (11) |
| O2—C10—O3 | 125.12 (11) | C15—C16—H16A | 120.4 |
| O2—C10—C9 | 117.50 (10) | N2—C16—H16A | 120.4 |
| C9—N1—C1—C2 | 177.07 (11) | C6—C7—C8—C9 | −0.28 (16) |
| C9—N1—C1—C6 | −0.38 (16) | C1—N1—C9—C8 | 3.32 (17) |
| N1—C1—C2—C3 | −177.15 (11) | C1—N1—C9—C10 | −174.09 (10) |
| C6—C1—C2—C3 | 0.41 (18) | C7—C8—C9—N1 | −3.03 (18) |
| C1—C2—C3—C4 | 0.56 (19) | C7—C8—C9—C10 | 174.35 (10) |
| C2—C3—C4—C5 | −0.68 (19) | N1—C9—C10—O2 | −168.15 (11) |
| C3—C4—C5—C6 | −0.19 (19) | C8—C9—C10—O2 | 14.27 (16) |
| C4—C5—C6—C1 | 1.15 (17) | N1—C9—C10—O3 | 14.14 (16) |
| C4—C5—C6—C7 | 179.93 (11) | C8—C9—C10—O3 | −163.43 (11) |
| N1—C1—C6—C5 | 176.19 (11) | C16—N2—C12—N3 | 177.71 (11) |
| C2—C1—C6—C5 | −1.25 (17) | C16—N2—C12—C13 | 0.46 (17) |
| N1—C1—C6—C7 | −2.65 (16) | N3—C12—C13—N4 | 3.90 (17) |
| C2—C1—C6—C7 | 179.90 (11) | N2—C12—C13—N4 | −178.98 (11) |
| C11—O1—C7—C8 | −5.09 (17) | N3—C12—C13—C14 | −176.96 (11) |
| C11—O1—C7—C6 | 176.10 (10) | N2—C12—C13—C14 | 0.16 (16) |
| C5—C6—C7—O1 | 2.97 (16) | N4—C13—C14—C15 | 178.25 (12) |
| C1—C6—C7—O1 | −178.23 (10) | C12—C13—C14—C15 | −0.86 (18) |
| C5—C6—C7—C8 | −175.92 (11) | C13—C14—C15—C16 | 0.96 (19) |
| C1—C6—C7—C8 | 2.88 (16) | C14—C15—C16—N2 | −0.34 (19) |
| O1—C7—C8—C9 | −179.05 (11) | C12—N2—C16—C15 | −0.37 (19) |
| H··· | ||||
| N3—H2···O3 | 0.91 (2) | 1.890 (19) | 2.7670 (18) | 162.8 (19) |
| N2—H3···N1 | 0.94 (2) | 1.94 (3) | 2.843 (2) | 162.5 (19) |
| N3—H1···O3i | 0.89 (2) | 1.94 (2) | 2.812 (2) | 163.4 (16) |
| N4—H4···O2ii | 0.893 (18) | 1.978 (19) | 2.8617 (15) | 169.8 (17) |
| N4—H5···O2i | 0.88 (2) | 2.17 (3) | 2.9419 (18) | 146 (3) |
| C4—H4 | 0.95 | 2.45 | 3.3529 (15) | 158 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N3—H2⋯O3 | 0.91 (2) | 1.890 (19) | 2.7670 (18) | 162.8 (19) |
| N2—H3⋯N1 | 0.94 (2) | 1.94 (3) | 2.843 (2) | 162.5 (19) |
| N3—H1⋯O3i | 0.89 (2) | 1.94 (2) | 2.812 (2) | 163.4 (16) |
| N4—H4⋯O2ii | 0.893 (18) | 1.978 (19) | 2.8617 (15) | 169.8 (17) |
| N4—H5⋯O2i | 0.88 (2) | 2.17 (3) | 2.9419 (18) | 146 (3) |
| C4—H4 | 0.95 | 2.45 | 3.3529 (15) | 158 |
Symmetry codes: (i) ; (ii) ; (iii) .