| Literature DB >> 23476249 |
Abstract
The asymmetric unit of the title salt, C5H12N3O(+)·C3H5O3(-), contains two carboxamidinium and two ethyl carbonate ions. In the crystal, the C-N bond lengths in the central CN3 units of the cations range between 1.324 (2) and 1.352 (2) Å, indicating partial double-bond character. The central C atoms are bonded to the three N atoms in a nearly ideal trigonal-planar geometry and the positive charges are delocalized in the CN3 planes. The morpholine rings are in chair conformations. The C-O bond lengths in both ethyl carbonate ions are characteristic for delocalized double bonds [1.243 (2)-1.251 (2) Å] and typical single bonds [1.368 (2) and 1.375 (2) Å]. In the crystal, N-H⋯O hydrogen bonds between cations and anions generate a two-dimensional network in the ac plane.Entities:
Year: 2012 PMID: 23476249 PMCID: PMC3589013 DOI: 10.1107/S1600536812046922
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H12N3O+·C3H5O3− | |
| Monoclinic, | Melting point: 413 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 5142 reflections | |
| θ = 0.4–28.3° | |
| µ = 0.11 mm−1 | |
| β = 109.505 (2)° | |
| Block, colourless | |
| 0.30 × 0.25 × 0.15 mm |
| Bruker–Nonius KappaCCD diffractometer | 2981 reflections with |
| Radiation source: sealed tube | |
| Graphite monochromator | θmax = 28.3°, θmin = 2.3° |
| φ scans, and ω scans | |
| 9902 measured reflections | |
| 5199 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5199 reflections | (Δ/σ)max < 0.001 |
| 305 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.14782 (18) | 0.19683 (9) | 0.08078 (17) | 0.0138 (4) | |
| N1 | 0.14407 (18) | 0.21777 (9) | −0.03987 (16) | 0.0186 (4) | |
| H11 | 0.082 (2) | 0.2060 (11) | −0.111 (2) | 0.027 (6)* | |
| H12 | 0.209 (2) | 0.2468 (11) | −0.039 (2) | 0.028 (6)* | |
| N2 | 0.24717 (16) | 0.21987 (9) | 0.18879 (16) | 0.0168 (4) | |
| H21 | 0.2567 (18) | 0.2083 (9) | 0.269 (2) | 0.013 (5)* | |
| H22 | 0.308 (2) | 0.2486 (11) | 0.171 (2) | 0.032 (6)* | |
| N3 | 0.05782 (14) | 0.15198 (8) | 0.09382 (13) | 0.0138 (3) | |
| C2 | 0.04415 (18) | 0.14053 (10) | 0.22786 (16) | 0.0174 (4) | |
| H2A | −0.0106 | 0.1755 | 0.2491 | 0.021* | |
| H2B | 0.1374 | 0.1404 | 0.2982 | 0.021* | |
| C3 | −0.02671 (19) | 0.07728 (10) | 0.22976 (17) | 0.0239 (5) | |
| H3A | 0.0343 | 0.0421 | 0.2203 | 0.029* | |
| H3B | −0.0410 | 0.0721 | 0.3182 | 0.029* | |
| O1 | −0.15763 (13) | 0.07261 (7) | 0.12343 (12) | 0.0227 (3) | |
| C4 | −0.13597 (19) | 0.07748 (10) | −0.00376 (17) | 0.0194 (4) | |
| H4A | −0.2261 | 0.0727 | −0.0777 | 0.023* | |
| H4B | −0.0746 | 0.0422 | −0.0120 | 0.023* | |
| C5 | −0.07145 (18) | 0.14066 (9) | −0.01951 (17) | 0.0168 (4) | |
| H5A | −0.0515 | 0.1408 | −0.1058 | 0.020* | |
| H5B | −0.1379 | 0.1757 | −0.0233 | 0.020* | |
| C6 | 0.61678 (17) | 0.19115 (9) | 0.08546 (16) | 0.0122 (4) | |
| N4 | 0.60204 (17) | 0.21566 (9) | −0.03589 (15) | 0.0161 (4) | |
| H41 | 0.656 (2) | 0.2472 (11) | −0.038 (2) | 0.026 (6)* | |
| H42 | 0.533 (2) | 0.2013 (12) | −0.113 (2) | 0.041 (7)* | |
| N5 | 0.71439 (16) | 0.21538 (8) | 0.19268 (15) | 0.0144 (4) | |
| H51 | 0.773 (2) | 0.2459 (11) | 0.185 (2) | 0.023 (6)* | |
| H52 | 0.745 (2) | 0.1933 (11) | 0.271 (2) | 0.035 (6)* | |
| N6 | 0.53305 (14) | 0.14360 (7) | 0.10007 (13) | 0.0134 (3) | |
| C7 | 0.56842 (19) | 0.11205 (10) | 0.23299 (16) | 0.0176 (4) | |
| H7A | 0.5906 | 0.1449 | 0.3053 | 0.021* | |
| H7B | 0.6517 | 0.0850 | 0.2480 | 0.021* | |
| C8 | 0.4493 (2) | 0.07110 (10) | 0.24096 (17) | 0.0189 (4) | |
| H8A | 0.4791 | 0.0472 | 0.3277 | 0.023* | |
| H8B | 0.3709 | 0.0991 | 0.2401 | 0.023* | |
| O2 | 0.40359 (13) | 0.02701 (6) | 0.13163 (11) | 0.0198 (3) | |
| C9 | 0.35206 (18) | 0.06230 (10) | 0.00799 (17) | 0.0182 (4) | |
| H9A | 0.2758 | 0.0907 | 0.0117 | 0.022* | |
| H9B | 0.3137 | 0.0321 | −0.0684 | 0.022* | |
| C10 | 0.46389 (18) | 0.10203 (9) | −0.01694 (17) | 0.0169 (4) | |
| H10A | 0.5335 | 0.0734 | −0.0341 | 0.020* | |
| H10B | 0.4226 | 0.1288 | −0.0986 | 0.020* | |
| C11 | −0.07231 (18) | 0.16716 (9) | 0.57058 (16) | 0.0133 (4) | |
| O3 | −0.16622 (12) | 0.18499 (7) | 0.46539 (11) | 0.0196 (3) | |
| O4 | −0.04966 (12) | 0.18664 (6) | 0.68830 (11) | 0.0179 (3) | |
| O5 | 0.01060 (12) | 0.11991 (7) | 0.54704 (11) | 0.0181 (3) | |
| C12 | 0.12224 (18) | 0.09664 (10) | 0.66226 (17) | 0.0188 (4) | |
| H12A | 0.0849 | 0.0761 | 0.7281 | 0.023* | |
| H12B | 0.1836 | 0.1324 | 0.7081 | 0.023* | |
| C13 | 0.20159 (19) | 0.04887 (10) | 0.60972 (18) | 0.0224 (5) | |
| H13A | 0.2355 | 0.0695 | 0.5427 | 0.034* | |
| H13B | 0.1405 | 0.0131 | 0.5671 | 0.034* | |
| H13C | 0.2806 | 0.0328 | 0.6851 | 0.034* | |
| C14 | 0.40406 (17) | 0.17608 (9) | 0.57044 (16) | 0.0130 (4) | |
| O6 | 0.31041 (12) | 0.19554 (6) | 0.46676 (11) | 0.0180 (3) | |
| O7 | 0.42103 (13) | 0.19133 (6) | 0.69029 (11) | 0.0183 (3) | |
| O8 | 0.49287 (12) | 0.13310 (6) | 0.54411 (11) | 0.0166 (3) | |
| C15 | 0.60379 (18) | 0.10913 (10) | 0.65905 (17) | 0.0179 (4) | |
| H15A | 0.5655 | 0.0877 | 0.7232 | 0.021* | |
| H15B | 0.6641 | 0.1448 | 0.7070 | 0.021* | |
| C16 | 0.68612 (19) | 0.06219 (10) | 0.60715 (18) | 0.0199 (4) | |
| H16A | 0.6270 | 0.0257 | 0.5651 | 0.030* | |
| H16B | 0.7659 | 0.0470 | 0.6828 | 0.030* | |
| H16C | 0.7190 | 0.0833 | 0.5398 | 0.030* |
| C1 | 0.0137 (9) | 0.0140 (11) | 0.0127 (9) | 0.0045 (8) | 0.0031 (7) | 0.0005 (7) |
| N1 | 0.0180 (9) | 0.0236 (10) | 0.0114 (8) | −0.0068 (8) | 0.0011 (7) | 0.0008 (7) |
| N2 | 0.0189 (9) | 0.0223 (10) | 0.0080 (8) | −0.0050 (7) | 0.0031 (7) | 0.0016 (7) |
| N3 | 0.0118 (7) | 0.0192 (9) | 0.0088 (7) | −0.0017 (7) | 0.0012 (6) | −0.0003 (6) |
| C2 | 0.0178 (9) | 0.0251 (12) | 0.0085 (8) | −0.0042 (8) | 0.0033 (7) | −0.0007 (8) |
| C3 | 0.0261 (11) | 0.0301 (13) | 0.0102 (9) | −0.0091 (9) | −0.0011 (8) | 0.0013 (8) |
| O1 | 0.0251 (7) | 0.0279 (9) | 0.0138 (6) | −0.0121 (6) | 0.0048 (5) | −0.0029 (6) |
| C4 | 0.0217 (10) | 0.0216 (12) | 0.0130 (9) | −0.0007 (9) | 0.0032 (8) | −0.0024 (8) |
| C5 | 0.0148 (9) | 0.0201 (11) | 0.0115 (8) | −0.0027 (8) | −0.0007 (7) | 0.0001 (8) |
| C6 | 0.0143 (9) | 0.0123 (10) | 0.0107 (9) | 0.0040 (8) | 0.0051 (7) | −0.0004 (7) |
| N4 | 0.0166 (8) | 0.0182 (10) | 0.0107 (8) | −0.0043 (8) | 0.0009 (7) | 0.0016 (7) |
| N5 | 0.0164 (8) | 0.0145 (10) | 0.0103 (8) | −0.0029 (7) | 0.0018 (6) | 0.0000 (6) |
| N6 | 0.0158 (8) | 0.0148 (9) | 0.0083 (7) | −0.0017 (7) | 0.0023 (6) | −0.0007 (6) |
| C7 | 0.0218 (10) | 0.0185 (11) | 0.0105 (9) | −0.0053 (8) | 0.0027 (7) | 0.0016 (7) |
| C8 | 0.0268 (10) | 0.0179 (12) | 0.0125 (9) | −0.0045 (9) | 0.0074 (8) | −0.0022 (8) |
| O2 | 0.0281 (7) | 0.0145 (8) | 0.0147 (6) | −0.0057 (6) | 0.0043 (5) | −0.0011 (5) |
| C9 | 0.0187 (10) | 0.0187 (12) | 0.0137 (9) | −0.0021 (8) | 0.0006 (7) | 0.0008 (8) |
| C10 | 0.0200 (10) | 0.0167 (11) | 0.0117 (8) | −0.0022 (8) | 0.0025 (7) | −0.0013 (7) |
| C11 | 0.0130 (9) | 0.0173 (11) | 0.0095 (9) | −0.0009 (8) | 0.0037 (7) | 0.0013 (7) |
| O3 | 0.0191 (7) | 0.0258 (9) | 0.0101 (6) | 0.0043 (6) | −0.0001 (5) | 0.0003 (5) |
| O4 | 0.0183 (7) | 0.0231 (8) | 0.0102 (6) | 0.0030 (6) | 0.0020 (5) | −0.0016 (5) |
| O5 | 0.0175 (7) | 0.0238 (8) | 0.0108 (6) | 0.0056 (6) | 0.0016 (5) | −0.0002 (5) |
| C12 | 0.0167 (10) | 0.0226 (12) | 0.0138 (9) | 0.0045 (8) | 0.0007 (7) | 0.0022 (8) |
| C13 | 0.0234 (10) | 0.0219 (12) | 0.0211 (10) | 0.0027 (9) | 0.0064 (8) | 0.0014 (8) |
| C14 | 0.0131 (9) | 0.0131 (11) | 0.0116 (9) | −0.0027 (8) | 0.0027 (7) | 0.0001 (7) |
| O6 | 0.0179 (7) | 0.0231 (8) | 0.0101 (6) | 0.0050 (6) | 0.0010 (5) | 0.0010 (5) |
| O7 | 0.0208 (7) | 0.0215 (8) | 0.0096 (6) | 0.0050 (6) | 0.0010 (5) | −0.0021 (5) |
| O8 | 0.0163 (7) | 0.0211 (8) | 0.0103 (6) | 0.0056 (6) | 0.0014 (5) | 0.0005 (5) |
| C15 | 0.0177 (9) | 0.0214 (12) | 0.0113 (9) | 0.0057 (8) | 0.0005 (7) | 0.0012 (8) |
| C16 | 0.0171 (10) | 0.0218 (12) | 0.0198 (10) | 0.0037 (8) | 0.0047 (8) | 0.0023 (8) |
| C1—N1 | 1.324 (2) | C7—H7A | 0.9900 |
| C1—N2 | 1.331 (2) | C7—H7B | 0.9900 |
| C1—N3 | 1.351 (2) | C8—O2 | 1.420 (2) |
| N1—H11 | 0.84 (2) | C8—H8A | 0.9900 |
| N1—H12 | 0.89 (2) | C8—H8B | 0.9900 |
| N2—H21 | 0.85 (2) | O2—C9 | 1.428 (2) |
| N2—H22 | 0.92 (2) | C9—C10 | 1.504 (3) |
| N3—C5 | 1.470 (2) | C9—H9A | 0.9900 |
| N3—C2 | 1.474 (2) | C9—H9B | 0.9900 |
| C2—C3 | 1.510 (3) | C10—H10A | 0.9900 |
| C2—H2A | 0.9900 | C10—H10B | 0.9900 |
| C2—H2B | 0.9900 | C11—O4 | 1.243 (2) |
| C3—O1 | 1.429 (2) | C11—O3 | 1.251 (2) |
| C3—H3A | 0.9900 | C11—O5 | 1.375 (2) |
| C3—H3B | 0.9900 | O5—C12 | 1.439 (2) |
| O1—C4 | 1.424 (2) | C12—C13 | 1.501 (3) |
| C4—C5 | 1.508 (3) | C12—H12A | 0.9900 |
| C4—H4A | 0.9900 | C12—H12B | 0.9900 |
| C4—H4B | 0.9900 | C13—H13A | 0.9800 |
| C5—H5A | 0.9900 | C13—H13B | 0.9800 |
| C5—H5B | 0.9900 | C13—H13C | 0.9800 |
| C6—N5 | 1.327 (2) | C14—O7 | 1.248 (2) |
| C6—N4 | 1.330 (2) | C14—O6 | 1.2507 (19) |
| C6—N6 | 1.352 (2) | C14—O8 | 1.368 (2) |
| N4—H41 | 0.86 (2) | O8—C15 | 1.4390 (19) |
| N4—H42 | 0.93 (2) | C15—C16 | 1.506 (3) |
| N5—H51 | 0.90 (2) | C15—H15A | 0.9900 |
| N5—H52 | 0.90 (2) | C15—H15B | 0.9900 |
| N6—C7 | 1.471 (2) | C16—H16A | 0.9800 |
| N6—C10 | 1.474 (2) | C16—H16B | 0.9800 |
| C7—C8 | 1.512 (3) | C16—H16C | 0.9800 |
| N1—C1—N2 | 117.44 (18) | C8—C7—H7B | 109.5 |
| N1—C1—N3 | 121.41 (16) | H7A—C7—H7B | 108.0 |
| N2—C1—N3 | 121.10 (16) | O2—C8—C7 | 112.11 (14) |
| C1—N1—H11 | 121.6 (14) | O2—C8—H8A | 109.2 |
| C1—N1—H12 | 115.2 (13) | C7—C8—H8A | 109.2 |
| H11—N1—H12 | 123.1 (19) | O2—C8—H8B | 109.2 |
| C1—N2—H21 | 122.7 (13) | C7—C8—H8B | 109.2 |
| C1—N2—H22 | 116.0 (13) | H8A—C8—H8B | 107.9 |
| H21—N2—H22 | 121.3 (17) | C8—O2—C9 | 108.51 (14) |
| C1—N3—C5 | 119.25 (14) | O2—C9—C10 | 111.74 (14) |
| C1—N3—C2 | 119.50 (14) | O2—C9—H9A | 109.3 |
| C5—N3—C2 | 113.33 (13) | C10—C9—H9A | 109.3 |
| N3—C2—C3 | 110.65 (14) | O2—C9—H9B | 109.3 |
| N3—C2—H2A | 109.5 | C10—C9—H9B | 109.3 |
| C3—C2—H2A | 109.5 | H9A—C9—H9B | 107.9 |
| N3—C2—H2B | 109.5 | N6—C10—C9 | 111.24 (14) |
| C3—C2—H2B | 109.5 | N6—C10—H10A | 109.4 |
| H2A—C2—H2B | 108.1 | C9—C10—H10A | 109.4 |
| O1—C3—C2 | 112.19 (15) | N6—C10—H10B | 109.4 |
| O1—C3—H3A | 109.2 | C9—C10—H10B | 109.4 |
| C2—C3—H3A | 109.2 | H10A—C10—H10B | 108.0 |
| O1—C3—H3B | 109.2 | O4—C11—O3 | 127.48 (17) |
| C2—C3—H3B | 109.2 | O4—C11—O5 | 119.35 (15) |
| H3A—C3—H3B | 107.9 | O3—C11—O5 | 113.17 (14) |
| C4—O1—C3 | 109.00 (13) | C11—O5—C12 | 117.10 (13) |
| O1—C4—C5 | 112.00 (15) | O5—C12—C13 | 106.96 (14) |
| O1—C4—H4A | 109.2 | O5—C12—H12A | 110.3 |
| C5—C4—H4A | 109.2 | C13—C12—H12A | 110.3 |
| O1—C4—H4B | 109.2 | O5—C12—H12B | 110.3 |
| C5—C4—H4B | 109.2 | C13—C12—H12B | 110.3 |
| H4A—C4—H4B | 107.9 | H12A—C12—H12B | 108.6 |
| N3—C5—C4 | 111.13 (14) | C12—C13—H13A | 109.5 |
| N3—C5—H5A | 109.4 | C12—C13—H13B | 109.5 |
| C4—C5—H5A | 109.4 | H13A—C13—H13B | 109.5 |
| N3—C5—H5B | 109.4 | C12—C13—H13C | 109.5 |
| C4—C5—H5B | 109.4 | H13A—C13—H13C | 109.5 |
| H5A—C5—H5B | 108.0 | H13B—C13—H13C | 109.5 |
| N5—C6—N4 | 118.27 (17) | O7—C14—O6 | 126.70 (17) |
| N5—C6—N6 | 120.64 (15) | O7—C14—O8 | 119.38 (14) |
| N4—C6—N6 | 121.08 (16) | O6—C14—O8 | 113.91 (14) |
| C6—N4—H41 | 116.3 (13) | C14—O8—C15 | 116.75 (12) |
| C6—N4—H42 | 121.0 (14) | O8—C15—C16 | 107.70 (14) |
| H41—N4—H42 | 122.5 (19) | O8—C15—H15A | 110.2 |
| C6—N5—H51 | 121.8 (13) | C16—C15—H15A | 110.2 |
| C6—N5—H52 | 120.7 (14) | O8—C15—H15B | 110.2 |
| H51—N5—H52 | 114.0 (18) | C16—C15—H15B | 110.2 |
| C6—N6—C7 | 118.09 (13) | H15A—C15—H15B | 108.5 |
| C6—N6—C10 | 118.98 (14) | C15—C16—H16A | 109.5 |
| C7—N6—C10 | 114.80 (15) | C15—C16—H16B | 109.5 |
| N6—C7—C8 | 110.93 (14) | H16A—C16—H16B | 109.5 |
| N6—C7—H7A | 109.5 | C15—C16—H16C | 109.5 |
| C8—C7—H7A | 109.5 | H16A—C16—H16C | 109.5 |
| N6—C7—H7B | 109.5 | H16B—C16—H16C | 109.5 |
| N1—C1—N3—C5 | −19.3 (3) | N4—C6—N6—C10 | 23.7 (2) |
| N2—C1—N3—C5 | 163.26 (16) | C6—N6—C7—C8 | 167.46 (16) |
| N1—C1—N3—C2 | −166.30 (17) | C10—N6—C7—C8 | −44.1 (2) |
| N2—C1—N3—C2 | 16.3 (3) | N6—C7—C8—O2 | 53.4 (2) |
| C1—N3—C2—C3 | −163.24 (16) | C7—C8—O2—C9 | −62.83 (19) |
| C5—N3—C2—C3 | 47.9 (2) | C8—O2—C9—C10 | 62.98 (19) |
| N3—C2—C3—O1 | −54.7 (2) | C6—N6—C10—C9 | −167.27 (15) |
| C2—C3—O1—C4 | 61.1 (2) | C7—N6—C10—C9 | 44.6 (2) |
| C3—O1—C4—C5 | −60.9 (2) | O2—C9—C10—N6 | −53.8 (2) |
| C1—N3—C5—C4 | 163.03 (16) | O4—C11—O5—C12 | −1.3 (2) |
| C2—N3—C5—C4 | −48.1 (2) | O3—C11—O5—C12 | 179.62 (15) |
| O1—C4—C5—N3 | 54.7 (2) | C11—O5—C12—C13 | −176.69 (15) |
| N5—C6—N6—C7 | −10.5 (2) | O7—C14—O8—C15 | −1.3 (2) |
| N4—C6—N6—C7 | 170.74 (16) | O6—C14—O8—C15 | 179.56 (15) |
| N5—C6—N6—C10 | −157.57 (16) | C14—O8—C15—C16 | 179.01 (15) |
| H··· | ||||
| N1—H11···O4i | 0.84 (2) | 2.12 (2) | 2.944 (1) | 168 (1) |
| N1—H12···O3ii | 0.89 (2) | 1.91 (2) | 2.795 (1) | 174 (1) |
| N2—H21···O6 | 0.85 (2) | 1.97 (2) | 2.807 (1) | 168 (1) |
| N2—H22···O4ii | 0.92 (2) | 1.95 (2) | 2.851 (1) | 164 (1) |
| N4—H41···O6ii | 0.86 (2) | 1.97 (2) | 2.817 (1) | 167 (1) |
| N4—H42···O7i | 0.93 (2) | 2.00 (2) | 2.889 (1) | 159 (1) |
| N5—H51···O7ii | 0.90 (2) | 1.99 (2) | 2.879 (1) | 172 (1) |
| N5—H52···O3iii | 0.90 (2) | 1.94 (2) | 2.776 (1) | 154 (1) |
Hydrogen-bond geometry (Å, °)
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| H⋯ |
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|
|---|---|---|---|---|
| N1—H11⋯O4i | 0.84 (2) | 2.12 (2) | 2.944 (1) | 168 (1) |
| N1—H12⋯O3ii | 0.89 (2) | 1.91 (2) | 2.795 (1) | 174 (1) |
| N2—H21⋯O6 | 0.85 (2) | 1.97 (2) | 2.807 (1) | 168 (1) |
| N2—H22⋯O4ii | 0.92 (2) | 1.95 (2) | 2.851 (1) | 164 (1) |
| N4—H41⋯O6ii | 0.86 (2) | 1.97 (2) | 2.817 (1) | 167 (1) |
| N4—H42⋯O7i | 0.93 (2) | 2.00 (2) | 2.889 (1) | 159 (1) |
| N5—H51⋯O7ii | 0.90 (2) | 1.99 (2) | 2.879 (1) | 172 (1) |
| N5—H52⋯O3iii | 0.90 (2) | 1.94 (2) | 2.776 (1) | 154 (1) |
Symmetry codes: (i) ; (ii) ; (iii) .