Literature DB >> 23476177

3-Ethyl-sulfinyl-2-(3-fluoro-phen-yl)-5,6-methyl-enedi-oxy-1-benzofuran.

Hong Dae Choi1, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C17H13FO4S, the 3-fluoro-phenyl ring makes a dihedral angle of 6.14 (5)° with the mean plane [r.m.s. deviation = 0.008 (1) Å] of the benzofuran fragment. In the crystal, mol-ecules are linked by weak C-H⋯F, C-H⋯O and C-H⋯π inter-actions, forming a three--dimensional network. The crystal structure also exhibits slipped π-π inter-actions between the 3-fluoro-phenyl rings of neighbouring mol-ecules [centroid-centroid distance = 3.769 (2) Å and slippage = 1.684 (2) Å].

Entities:  

Year:  2012        PMID: 23476177      PMCID: PMC3588941          DOI: 10.1107/S1600536812044832

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on and the crystal structures of related benzofuran compounds, see: Choi et al. (2010 ▶); Seo et al. (2011 ▶).

Experimental

Crystal data

C17H13FO4S M = 332.33 Monoclinic, a = 8.8516 (2) Å b = 21.8221 (4) Å c = 7.7228 (2) Å β = 102.949 (1)° V = 1453.80 (6) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 173 K 0.39 × 0.29 × 0.26 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.908, T max = 0.937 14376 measured reflections 3600 independent reflections 3131 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.101 S = 1.02 3600 reflections 209 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.35 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812044832/mw2094sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044832/mw2094Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812044832/mw2094Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H13FO4SF(000) = 688
Mr = 332.33Dx = 1.518 Mg m3
Monoclinic, P21/cMelting point: 408 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.8516 (2) ÅCell parameters from 6139 reflections
b = 21.8221 (4) Åθ = 2.9–28.2°
c = 7.7228 (2) ŵ = 0.25 mm1
β = 102.949 (1)°T = 173 K
V = 1453.80 (6) Å3Block, colourless
Z = 40.39 × 0.29 × 0.26 mm
Bruker SMART APEXII CCD diffractometer3600 independent reflections
Radiation source: rotating anode3131 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.025
Detector resolution: 10.0 pixels mm-1θmax = 28.3°, θmin = 1.9°
φ and ω scansh = −11→11
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −29→27
Tmin = 0.908, Tmax = 0.937l = −10→10
14376 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: difference Fourier map
wR(F2) = 0.101H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0488P)2 + 0.7371P] where P = (Fo2 + 2Fc2)/3
3600 reflections(Δ/σ)max = 0.001
209 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.20748 (4)0.653717 (15)0.40724 (5)0.02313 (11)
F1−0.09845 (13)0.46852 (5)0.11643 (15)0.0452 (3)
O10.44774 (12)0.52350 (4)0.70767 (14)0.0247 (2)
O20.76433 (15)0.73096 (6)0.93233 (18)0.0424 (3)
O30.86160 (15)0.64201 (6)1.07899 (18)0.0431 (3)
O40.18119 (13)0.70803 (5)0.51487 (16)0.0341 (3)
C10.33826 (16)0.60530 (6)0.55117 (19)0.0215 (3)
C20.47112 (16)0.62662 (6)0.68258 (18)0.0222 (3)
C30.54231 (17)0.68385 (7)0.7276 (2)0.0252 (3)
H30.50370.72070.66830.030*
C40.67160 (18)0.68235 (7)0.8635 (2)0.0271 (3)
C50.72968 (17)0.62887 (7)0.9530 (2)0.0278 (3)
C60.66316 (17)0.57266 (7)0.9140 (2)0.0271 (3)
H60.70200.53620.97550.033*
C70.53247 (16)0.57424 (6)0.77457 (19)0.0229 (3)
C80.32896 (16)0.54330 (6)0.57115 (19)0.0223 (3)
C90.8859 (2)0.70603 (8)1.0666 (2)0.0403 (4)
H9A0.98720.71371.03650.048*
H9B0.88660.72591.18210.048*
C100.22658 (16)0.49448 (6)0.48447 (19)0.0225 (3)
C110.10942 (17)0.50551 (7)0.3331 (2)0.0257 (3)
H110.09480.54510.28120.031*
C120.01626 (18)0.45741 (7)0.2619 (2)0.0274 (3)
C130.03117 (18)0.39881 (7)0.3285 (2)0.0292 (3)
H13−0.03580.36680.27430.035*
C140.14759 (19)0.38828 (7)0.4776 (2)0.0314 (3)
H140.16130.34830.52720.038*
C150.24452 (18)0.43523 (7)0.5557 (2)0.0280 (3)
H150.32380.42720.65830.034*
C160.33604 (19)0.67847 (7)0.2700 (2)0.0306 (3)
H16A0.29470.71640.20610.037*
H16B0.43900.68800.34620.037*
C170.3535 (2)0.62964 (10)0.1369 (3)0.0450 (4)
H17A0.39610.59230.20000.068*
H17B0.42370.64430.06420.068*
H17C0.25190.62060.06000.068*
U11U22U33U12U13U23
S10.02202 (18)0.01839 (17)0.02712 (19)0.00208 (12)0.00156 (13)0.00075 (13)
F10.0445 (6)0.0362 (5)0.0436 (6)−0.0053 (4)−0.0138 (5)−0.0012 (4)
O10.0256 (5)0.0197 (5)0.0266 (5)0.0015 (4)0.0013 (4)0.0023 (4)
O20.0397 (7)0.0311 (6)0.0465 (7)−0.0092 (5)−0.0113 (6)−0.0031 (5)
O30.0365 (7)0.0404 (7)0.0419 (7)−0.0063 (5)−0.0133 (5)0.0026 (5)
O40.0370 (6)0.0226 (5)0.0417 (7)0.0079 (4)0.0069 (5)−0.0049 (5)
C10.0206 (6)0.0208 (6)0.0233 (6)0.0025 (5)0.0050 (5)0.0011 (5)
C20.0216 (6)0.0227 (7)0.0226 (7)0.0025 (5)0.0056 (5)−0.0009 (5)
C30.0261 (7)0.0212 (7)0.0278 (7)0.0020 (5)0.0046 (6)−0.0011 (5)
C40.0264 (7)0.0257 (7)0.0288 (7)−0.0023 (6)0.0051 (6)−0.0037 (6)
C50.0225 (7)0.0342 (8)0.0248 (7)−0.0003 (6)0.0011 (6)−0.0010 (6)
C60.0262 (7)0.0271 (7)0.0264 (7)0.0040 (6)0.0021 (6)0.0047 (6)
C70.0233 (7)0.0211 (7)0.0241 (7)0.0002 (5)0.0051 (5)0.0000 (5)
C80.0219 (6)0.0220 (7)0.0225 (7)0.0022 (5)0.0041 (5)0.0007 (5)
C90.0382 (9)0.0403 (9)0.0363 (9)−0.0093 (8)−0.0048 (7)−0.0005 (7)
C100.0241 (7)0.0196 (6)0.0253 (7)0.0001 (5)0.0086 (5)−0.0007 (5)
C110.0279 (7)0.0212 (7)0.0278 (7)0.0001 (5)0.0058 (6)−0.0005 (5)
C120.0271 (7)0.0274 (7)0.0270 (7)0.0003 (6)0.0045 (6)−0.0030 (6)
C130.0319 (8)0.0242 (7)0.0333 (8)−0.0058 (6)0.0111 (6)−0.0059 (6)
C140.0391 (9)0.0202 (7)0.0360 (8)−0.0007 (6)0.0106 (7)0.0017 (6)
C150.0308 (7)0.0236 (7)0.0289 (7)0.0009 (6)0.0050 (6)0.0031 (6)
C160.0310 (8)0.0296 (8)0.0301 (8)−0.0033 (6)0.0046 (6)0.0080 (6)
C170.0486 (11)0.0550 (12)0.0347 (9)−0.0016 (9)0.0162 (8)−0.0018 (8)
S1—O41.4954 (11)C8—C101.4602 (19)
S1—C11.7651 (14)C9—H9A0.9900
S1—C161.8029 (16)C9—H9B0.9900
F1—C121.3568 (18)C10—C111.399 (2)
O1—C71.3717 (17)C10—C151.400 (2)
O1—C81.3809 (16)C11—C121.372 (2)
O2—C41.3733 (18)C11—H110.9500
O2—C91.424 (2)C12—C131.373 (2)
O3—C51.3724 (18)C13—C141.381 (2)
O3—C91.420 (2)C13—H130.9500
C1—C81.366 (2)C14—C151.385 (2)
C1—C21.4473 (19)C14—H140.9500
C2—C71.3905 (19)C15—H150.9500
C2—C31.407 (2)C16—C171.513 (3)
C3—C41.369 (2)C16—H16A0.9900
C3—H30.9500C16—H16B0.9900
C4—C51.395 (2)C17—H17A0.9800
C5—C61.365 (2)C17—H17B0.9800
C6—C71.393 (2)C17—H17C0.9800
C6—H60.9500
O4—S1—C1106.63 (7)O3—C9—H9B109.9
O4—S1—C16106.65 (7)O2—C9—H9B109.9
C1—S1—C1697.95 (7)H9A—C9—H9B108.3
C7—O1—C8107.07 (10)C11—C10—C15118.99 (13)
C4—O2—C9105.97 (13)C11—C10—C8121.69 (13)
C5—O3—C9105.99 (13)C15—C10—C8119.32 (13)
C8—C1—C2107.41 (12)C12—C11—C10118.03 (14)
C8—C1—S1128.05 (11)C12—C11—H11121.0
C2—C1—S1124.35 (11)C10—C11—H11121.0
C7—C2—C3120.10 (13)F1—C12—C11117.79 (14)
C7—C2—C1104.88 (12)F1—C12—C13117.90 (13)
C3—C2—C1135.01 (13)C11—C12—C13124.31 (14)
C4—C3—C2114.80 (13)C12—C13—C14117.26 (14)
C4—C3—H3122.6C12—C13—H13121.4
C2—C3—H3122.6C14—C13—H13121.4
C3—C4—O2127.07 (14)C13—C14—C15120.90 (14)
C3—C4—C5123.50 (14)C13—C14—H14119.5
O2—C4—C5109.43 (13)C15—C14—H14119.5
C6—C5—O3126.94 (14)C14—C15—C10120.50 (14)
C6—C5—C4123.35 (14)C14—C15—H15119.8
O3—C5—C4109.70 (14)C10—C15—H15119.8
C5—C6—C7113.02 (13)C17—C16—S1111.26 (12)
C5—C6—H6123.5C17—C16—H16A109.4
C7—C6—H6123.5S1—C16—H16A109.4
O1—C7—C2110.68 (12)C17—C16—H16B109.4
O1—C7—C6124.09 (12)S1—C16—H16B109.4
C2—C7—C6125.22 (13)H16A—C16—H16B108.0
C1—C8—O1109.95 (12)C16—C17—H17A109.5
C1—C8—C10135.85 (13)C16—C17—H17B109.5
O1—C8—C10114.20 (12)H17A—C17—H17B109.5
O3—C9—O2108.90 (13)C16—C17—H17C109.5
O3—C9—H9A109.9H17A—C17—H17C109.5
O2—C9—H9A109.9H17B—C17—H17C109.5
O4—S1—C1—C8134.07 (14)C1—C2—C7—C6179.62 (14)
C16—S1—C1—C8−115.83 (15)C5—C6—C7—O1178.29 (14)
O4—S1—C1—C2−40.34 (14)C5—C6—C7—C2−0.7 (2)
C16—S1—C1—C269.76 (13)C2—C1—C8—O10.08 (16)
C8—C1—C2—C7−0.34 (16)S1—C1—C8—O1−175.09 (10)
S1—C1—C2—C7175.05 (11)C2—C1—C8—C10−179.64 (16)
C8—C1—C2—C3178.82 (16)S1—C1—C8—C105.2 (3)
S1—C1—C2—C3−5.8 (2)C7—O1—C8—C10.22 (16)
C7—C2—C3—C40.3 (2)C7—O1—C8—C10180.00 (12)
C1—C2—C3—C4−178.78 (16)C5—O3—C9—O20.8 (2)
C2—C3—C4—O2178.99 (15)C4—O2—C9—O3−1.3 (2)
C2—C3—C4—C5−0.4 (2)C1—C8—C10—C115.9 (3)
C9—O2—C4—C3−178.18 (17)O1—C8—C10—C11−173.83 (13)
C9—O2—C4—C51.29 (19)C1—C8—C10—C15−173.27 (17)
C9—O3—C5—C6178.63 (17)O1—C8—C10—C157.0 (2)
C9—O3—C5—C4−0.03 (19)C15—C10—C11—C120.5 (2)
C3—C4—C5—C60.0 (3)C8—C10—C11—C12−178.70 (14)
O2—C4—C5—C6−179.54 (15)C10—C11—C12—F1179.18 (13)
C3—C4—C5—O3178.68 (15)C10—C11—C12—C13−0.6 (2)
O2—C4—C5—O3−0.81 (19)F1—C12—C13—C14−179.45 (14)
O3—C5—C6—C7−177.91 (15)C11—C12—C13—C140.3 (2)
C4—C5—C6—C70.6 (2)C12—C13—C14—C150.1 (2)
C8—O1—C7—C2−0.45 (16)C13—C14—C15—C10−0.2 (2)
C8—O1—C7—C6−179.59 (14)C11—C10—C15—C14−0.1 (2)
C3—C2—C7—O1−178.82 (13)C8—C10—C15—C14179.08 (14)
C1—C2—C7—O10.49 (16)O4—S1—C16—C17−172.19 (12)
C3—C2—C7—C60.3 (2)C1—S1—C16—C1777.73 (13)
D—H···AD—HH···AD···AD—H···A
C9—H9A···O4i0.992.453.314 (2)145
C9—H9B···O2ii0.992.593.519 (3)156
C16—H16A···O4iii0.992.293.2689 (19)169
C6—H6···F1iv0.952.373.2532 (18)154
C17—H17B···Cg1v0.982.743.642 (3)153
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C2–C7 benzene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C9—H9A⋯O4i 0.992.453.314 (2)145
C9—H9B⋯O2ii 0.992.593.519 (3)156
C16—H16A⋯O4iii 0.992.293.2689 (19)169
C6—H6⋯F1iv 0.952.373.2532 (18)154
C17—H17BCg1v 0.982.743.642 (3)153

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-Ethyl-sulfinyl-2-(4-fluoro-phen-yl)-5,6-methyl-enedi-oxy-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-08

3.  2-(4-Fluoro-phen-yl)-3-isopropyl-sulfinyl-5,6-methyl-enedi-oxy-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30
  3 in total

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