Literature DB >> 21579393

3-Ethyl-sulfinyl-2-(4-fluoro-phen-yl)-5,6-methyl-enedi-oxy-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(17)H(13)FO(4)S, the 4-fluoro-phenyl ring makes a dihedral angle of 4.92 (4)° with the plane of the 5,6-methyl-enedi-oxy-1-benzofuran fragment. In the crystal, mol-ecules are linked by weak inter-molecular C-H⋯O and C-H⋯F hydrogen bonds.

Entities:  

Year:  2010        PMID: 21579393      PMCID: PMC2979611          DOI: 10.1107/S160053681001617X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 2-aryl-5,6-methyl­enedi­oxy-3-methyl­sulfinyl-1-benzofuran derivatives, see: Choi et al. (2007 ▶, 2010 ▶). For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶).

Experimental

Crystal data

C17H13FO4S M = 332.33 Triclinic, a = 7.1081 (9) Å b = 9.631 (1) Å c = 10.708 (1) Å α = 93.201 (2)° β = 95.510 (2)° γ = 105.423 (2)° V = 700.85 (13) Å3 Z = 2 Mo Kα radiation μ = 0.26 mm−1 T = 173 K 0.40 × 0.36 × 0.28 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.610, T max = 0.746 6872 measured reflections 3194 independent reflections 2955 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.093 S = 1.03 3194 reflections 209 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681001617X/fl2302sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681001617X/fl2302Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H13FO4SZ = 2
Mr = 332.33F(000) = 344
Triclinic, P1Dx = 1.575 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.1081 (9) ÅCell parameters from 4697 reflections
b = 9.631 (1) Åθ = 2.2–27.5°
c = 10.708 (1) ŵ = 0.26 mm1
α = 93.201 (2)°T = 173 K
β = 95.510 (2)°Block, colourless
γ = 105.423 (2)°0.40 × 0.36 × 0.28 mm
V = 700.85 (13) Å3
Bruker SMART APEXII CCD diffractometer3194 independent reflections
Radiation source: rotating anode2955 reflections with I > 2σ(I)
graphite multilayerRint = 0.021
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 1.9°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→12
Tmin = 0.610, Tmax = 0.746l = −13→13
6872 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: difference Fourier map
wR(F2) = 0.093H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0462P)2 + 0.3499P] where P = (Fo2 + 2Fc2)/3
3194 reflections(Δ/σ)max < 0.001
209 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.03741 (5)0.18237 (3)0.61999 (3)0.02096 (11)
F0.26284 (17)0.20685 (12)0.00053 (8)0.0408 (3)
O10.28566 (14)0.56937 (10)0.50825 (8)0.0191 (2)
O20.19966 (18)0.67938 (11)0.99731 (9)0.0294 (2)
O30.33831 (17)0.87862 (11)0.89214 (10)0.0291 (2)
O4−0.10317 (16)0.18196 (12)0.71512 (11)0.0311 (3)
C10.14785 (19)0.36484 (14)0.59545 (12)0.0173 (3)
C20.18385 (19)0.48389 (14)0.69123 (12)0.0174 (3)
C30.15149 (19)0.49635 (14)0.81894 (12)0.0192 (3)
H30.09490.41720.86180.023*
C40.2106 (2)0.63511 (15)0.87430 (12)0.0204 (3)
C50.2704 (3)0.83253 (17)1.00884 (14)0.0312 (3)
H5A0.37700.86371.07660.037*
H5B0.16600.87491.02810.037*
C60.2941 (2)0.75576 (15)0.81127 (13)0.0209 (3)
C70.3259 (2)0.74755 (14)0.68725 (13)0.0209 (3)
H70.38040.82770.64490.025*
C80.26789 (19)0.60610 (14)0.63121 (12)0.0176 (3)
C90.21082 (19)0.42130 (14)0.48737 (12)0.0176 (3)
C100.22097 (19)0.36334 (15)0.35978 (12)0.0189 (3)
C110.1684 (2)0.21477 (15)0.32548 (13)0.0234 (3)
H110.12460.15050.38490.028*
C120.1803 (2)0.16148 (17)0.20450 (14)0.0273 (3)
H120.14370.06260.18170.033*
C130.2479 (2)0.25910 (18)0.11899 (13)0.0265 (3)
C140.3012 (2)0.40604 (17)0.14766 (13)0.0266 (3)
H140.34620.46900.08750.032*
C150.2863 (2)0.45824 (15)0.26865 (13)0.0225 (3)
H150.32010.55750.28960.027*
C160.2528 (2)0.14580 (16)0.70193 (13)0.0248 (3)
H16A0.31200.22260.76780.030*
H16B0.21290.05600.74140.030*
C170.4039 (2)0.13464 (17)0.61352 (15)0.0276 (3)
H17A0.34730.05630.55010.041*
H17B0.51630.11730.66040.041*
H17C0.44350.22330.57410.041*
U11U22U33U12U13U23
S0.02154 (18)0.01632 (17)0.02366 (18)0.00116 (13)0.00638 (13)0.00332 (12)
F0.0605 (7)0.0474 (6)0.0187 (4)0.0201 (5)0.0118 (4)−0.0023 (4)
O10.0233 (5)0.0164 (5)0.0176 (4)0.0042 (4)0.0053 (4)0.0030 (3)
O20.0455 (7)0.0222 (5)0.0197 (5)0.0063 (5)0.0095 (4)−0.0014 (4)
O30.0437 (6)0.0185 (5)0.0237 (5)0.0060 (4)0.0059 (4)−0.0024 (4)
O40.0287 (6)0.0290 (6)0.0365 (6)0.0040 (4)0.0162 (5)0.0079 (5)
C10.0169 (6)0.0165 (6)0.0184 (6)0.0038 (5)0.0036 (5)0.0018 (5)
C20.0157 (6)0.0171 (6)0.0194 (6)0.0043 (5)0.0028 (5)0.0021 (5)
C30.0202 (6)0.0189 (6)0.0186 (6)0.0039 (5)0.0046 (5)0.0036 (5)
C40.0212 (6)0.0232 (7)0.0178 (6)0.0072 (5)0.0043 (5)0.0017 (5)
C50.0412 (9)0.0237 (7)0.0253 (7)0.0030 (6)0.0080 (6)−0.0045 (6)
C60.0220 (6)0.0171 (6)0.0233 (7)0.0060 (5)0.0015 (5)−0.0008 (5)
C70.0237 (7)0.0164 (6)0.0229 (6)0.0048 (5)0.0044 (5)0.0041 (5)
C80.0179 (6)0.0192 (6)0.0168 (6)0.0058 (5)0.0037 (5)0.0029 (5)
C90.0179 (6)0.0153 (6)0.0199 (6)0.0046 (5)0.0027 (5)0.0021 (5)
C100.0168 (6)0.0227 (7)0.0176 (6)0.0060 (5)0.0022 (5)0.0020 (5)
C110.0266 (7)0.0234 (7)0.0198 (6)0.0048 (6)0.0063 (5)0.0020 (5)
C120.0313 (8)0.0259 (7)0.0238 (7)0.0068 (6)0.0046 (6)−0.0028 (6)
C130.0290 (7)0.0376 (8)0.0158 (6)0.0139 (6)0.0048 (5)−0.0004 (6)
C140.0287 (7)0.0349 (8)0.0196 (7)0.0120 (6)0.0062 (5)0.0090 (6)
C150.0240 (7)0.0231 (7)0.0211 (6)0.0070 (5)0.0039 (5)0.0042 (5)
C160.0295 (7)0.0231 (7)0.0242 (7)0.0093 (6)0.0055 (6)0.0078 (5)
C170.0261 (7)0.0252 (7)0.0339 (8)0.0092 (6)0.0072 (6)0.0050 (6)
S—O41.493 (1)C7—C81.396 (2)
S—C11.770 (1)C7—H70.9300
S—C161.817 (2)C9—C101.462 (2)
F—C131.363 (2)C10—C111.397 (2)
O1—C81.371 (2)C10—C151.401 (2)
O1—C91.380 (2)C11—C121.385 (2)
O2—C41.378 (2)C11—H110.9300
O2—C51.420 (2)C12—C131.376 (2)
O3—C61.373 (2)C12—H120.9300
O3—C51.434 (2)C13—C141.373 (2)
C1—C91.370 (2)C14—C151.387 (2)
C1—C21.447 (2)C14—H140.9300
C2—C81.393 (2)C15—H150.9300
C2—C31.412 (2)C16—C171.519 (2)
C3—C41.371 (2)C16—H16A0.9700
C3—H30.9300C16—H16B0.9700
C4—C61.399 (2)C17—H17A0.9600
C5—H5A0.9700C17—H17B0.9600
C5—H5B0.9700C17—H17C0.9600
C6—C71.370 (2)
O4—S—C1107.47 (6)C1—C9—O1109.89 (11)
O4—S—C16106.53 (7)C1—C9—C10135.89 (12)
C1—S—C1697.30 (7)O1—C9—C10114.21 (11)
C8—O1—C9107.08 (10)C11—C10—C15118.46 (12)
C4—O2—C5106.39 (11)C11—C10—C9121.86 (12)
C6—O3—C5105.79 (11)C15—C10—C9119.68 (12)
C9—C1—C2107.48 (11)C12—C11—C10121.19 (13)
C9—C1—S128.49 (10)C12—C11—H11119.4
C2—C1—S124.02 (10)C10—C11—H11119.4
C8—C2—C3120.58 (12)C13—C12—C11118.09 (14)
C8—C2—C1104.70 (11)C13—C12—H12121.0
C3—C2—C1134.72 (12)C11—C12—H12121.0
C4—C3—C2114.24 (12)F—C13—C14118.71 (13)
C4—C3—H3122.9F—C13—C12118.20 (14)
C2—C3—H3122.9C14—C13—C12123.09 (13)
C3—C4—O2127.02 (13)C13—C14—C15118.31 (14)
C3—C4—C6123.81 (13)C13—C14—H14120.8
O2—C4—C6109.17 (12)C15—C14—H14120.8
O2—C5—O3108.58 (11)C14—C15—C10120.84 (13)
O2—C5—H5A110.0C14—C15—H15119.6
O3—C5—H5A110.0C10—C15—H15119.6
O2—C5—H5B110.0C17—C16—S111.94 (10)
O3—C5—H5B110.0C17—C16—H16A109.2
H5A—C5—H5B108.4S—C16—H16A109.2
C7—C6—O3126.72 (13)C17—C16—H16B109.2
C7—C6—C4123.41 (13)S—C16—H16B109.2
O3—C6—C4109.87 (12)H16A—C16—H16B107.9
C6—C7—C8112.81 (12)C16—C17—H17A109.5
C6—C7—H7123.6C16—C17—H17B109.5
C8—C7—H7123.6H17A—C17—H17B109.5
O1—C8—C2110.85 (11)C16—C17—H17C109.5
O1—C8—C7124.01 (12)H17A—C17—H17C109.5
C2—C8—C7125.15 (12)H17B—C17—H17C109.5
O4—S—C1—C9−147.47 (12)C1—C2—C8—O1−0.34 (14)
C16—S—C1—C9102.60 (13)C3—C2—C8—C7−0.3 (2)
O4—S—C1—C231.24 (13)C1—C2—C8—C7179.35 (13)
C16—S—C1—C2−78.69 (12)C6—C7—C8—O1−179.57 (12)
C9—C1—C2—C80.08 (14)C6—C7—C8—C20.8 (2)
S—C1—C2—C8−178.86 (10)C2—C1—C9—O10.20 (15)
C9—C1—C2—C3179.64 (14)S—C1—C9—O1179.08 (9)
S—C1—C2—C30.7 (2)C2—C1—C9—C10178.68 (14)
C8—C2—C3—C4−0.45 (19)S—C1—C9—C10−2.4 (2)
C1—C2—C3—C4−179.95 (14)C8—O1—C9—C1−0.41 (14)
C2—C3—C4—O2−179.10 (13)C8—O1—C9—C10−179.25 (10)
C2—C3—C4—C60.7 (2)C1—C9—C10—C11−4.3 (2)
C5—O2—C4—C3−177.56 (14)O1—C9—C10—C11174.11 (12)
C5—O2—C4—C62.65 (16)C1—C9—C10—C15176.13 (15)
C4—O2—C5—O3−4.39 (17)O1—C9—C10—C15−5.45 (17)
C6—O3—C5—O24.45 (17)C15—C10—C11—C120.1 (2)
C5—O3—C6—C7177.68 (14)C9—C10—C11—C12−179.47 (13)
C5—O3—C6—C4−2.82 (16)C10—C11—C12—C130.8 (2)
C3—C4—C6—C7−0.1 (2)C11—C12—C13—F178.92 (13)
O2—C4—C6—C7179.65 (13)C11—C12—C13—C14−0.9 (2)
C3—C4—C6—O3−179.66 (13)F—C13—C14—C15−179.73 (13)
O2—C4—C6—O30.13 (16)C12—C13—C14—C150.1 (2)
O3—C6—C7—C8178.87 (13)C13—C14—C15—C100.9 (2)
C4—C6—C7—C8−0.6 (2)C11—C10—C15—C14−0.9 (2)
C9—O1—C8—C20.47 (14)C9—C10—C15—C14178.64 (13)
C9—O1—C8—C7−179.23 (12)O4—S—C16—C17176.72 (10)
C3—C2—C8—O1−179.97 (11)C1—S—C16—C17−72.56 (11)
D—H···AD—HH···AD···AD—H···A
C12—H12···O4i0.932.623.380 (2)140
C16—H16A···Fii0.972.563.2090 (17)125
C17—H17B···O4iii0.962.613.469 (2)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12⋯O4i0.932.623.380 (2)140
C16—H16A⋯Fii0.972.563.2090 (17)125
C17—H17B⋯O4iii0.962.613.469 (2)149

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  2-(4-Fluoro-phen-yl)-5,6-methyl-enedi-oxy-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

  6 in total
  2 in total

1.  2-(4-Fluoro-phen-yl)-3-isopropyl-sulfinyl-5,6-methyl-enedi-oxy-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30

2.  3-Ethyl-sulfinyl-2-(3-fluoro-phen-yl)-5,6-methyl-enedi-oxy-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-14
  2 in total

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