Literature DB >> 23474886

Exo- and endoglycosidases revisited.

Akira Kobata1.   

Abstract

Many glycosidases, which work as useful reagents for the studies of structures and functions of free and conjugated oligosaccharides, have been found and thoroughly purified. These enzymes are classified into exo- and endoglycosidases by their glycon specificities. Their usefulness and limits as reagents are explained in detail in this review.Endoglycosidases, which were originally found in the culture fluid of bacteria and in the extracts of plants, are now widely found in the mammals including humans. The physiological roles of these enzymes are discussed in relation to the oligosaccharides accumulated in the urine of patients with exoglycosidase deficiencies. Furthermore, PNGase is found to play important roles in the ER-associated degradation pathway of glycoproteins.Recent studies of the glycosidases in Bifidobacteria have revealed that GNB/LNB pathway, which uniquely exist in this bacteria, works for the expression of Bifidus factor activity of human milk oligosaccharides, an important topic in the baby nutrition. This interesting field will be introduced in detail in one section of this article

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23474886      PMCID: PMC3647078          DOI: 10.2183/pjab.89.97

Source DB:  PubMed          Journal:  Proc Jpn Acad Ser B Phys Biol Sci        ISSN: 0386-2208            Impact factor:   3.493


  96 in total

1.  A novel endo-beta-galactosidase from Clostridium perfringens that liberates the disaccharide GlcNAcalpha 1-->Gal from glycans specifically expressed in the gastric gland mucous cell-type mucin.

Authors:  H Ashida; K Anderson; J Nakayama; K Maskos; C W Chou; R B Cole; S C Li; Y T Li
Journal:  J Biol Chem       Date:  2001-05-29       Impact factor: 5.157

2.  Endo-beta-N-acetylglucosaminidase from fig latex.

Authors:  S Chien; R Weinburg; S Li; Y Li
Journal:  Biochem Biophys Res Commun       Date:  1976-05-23       Impact factor: 3.575

3.  Oligosaccharides of human milk. Structural studies of two new octasaccharides, difucosyl derivatives of para-lacto-N-hexaose and para-lacto-N-neohexaose.

Authors:  K Yamashita; Y Tachibana; A Kobata
Journal:  J Biol Chem       Date:  1977-08-10       Impact factor: 5.157

4.  Partial purification and characterization of an endo-alpha-N-acetylgalactosaminidase from the culture of medium of Diplococcus pneumoniae.

Authors:  Y Endo; A Kobata
Journal:  J Biochem       Date:  1976-07       Impact factor: 3.387

5.  Substrate specificity of Diplococcal beta-N-acetylhexosaminidase, a useful enzyme for the structural studies of complex type asparagine-linked sugar chains.

Authors:  K Yamashita; T Ohkura; H Yoshima; A Kobata
Journal:  Biochem Biophys Res Commun       Date:  1981-05-15       Impact factor: 3.575

6.  The action on soluble blood group A substances of an alpha-N-acetylgalactosaminidase from Helix pomatia.

Authors:  H Tuppy; W L Staudenbauer
Journal:  Biochemistry       Date:  1966-05       Impact factor: 3.162

7.  Purification, crystallization and preliminary X-ray analysis of the galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum JCM1217.

Authors:  Jun Wada; Ryuichiro Suzuki; Shinya Fushinobu; Motomitsu Kitaoka; Takayoshi Wakagi; Hirofumi Shoun; Hisashi Ashida; Hidehiko Kumagai; Takane Katayama; Kenji Yamamoto
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-08-10

8.  A new endo-beta-galactosidase releasing Gal alpha 1----3Gal from carbohydrate moieties of glycoproteins and from a glycolipid.

Authors:  N Fushuku; H Muramatsu; M M Uezono; T Muramatsu
Journal:  J Biol Chem       Date:  1987-07-25       Impact factor: 5.157

9.  Primary structure of human milk octa-, dodeca- and tridecasaccharides determined by a combination of 1H-NMR spectroscopy and fast-atom-bombardment mass spectrometry. Evidence for a new core structure, the para-lacto-N-octaose.

Authors:  S Haeuw-Fievre; J M Wieruszeski; Y Plancke; J C Michalski; J Montreuil; G Strecker
Journal:  Eur J Biochem       Date:  1993-07-15

10.  The predominance of type I oligosaccharides is a feature specific to human breast milk.

Authors:  Tadasu Urashima; Sadaki Asakuma; Fiame Leo; Kenji Fukuda; Michael Messer; Olav T Oftedal
Journal:  Adv Nutr       Date:  2012-05-01       Impact factor: 8.701

View more
  8 in total

Review 1.  Harnessing glycoenzyme engineering for synthesis of bioactive oligosaccharides.

Authors:  Mounir Benkoulouche; Régis Fauré; Magali Remaud-Siméon; Claire Moulis; Isabelle André
Journal:  Interface Focus       Date:  2019-02-15       Impact factor: 3.906

2.  Endo-β-N-acetylglucosaminidase forms N-GlcNAc protein aggregates during ER-associated degradation in Ngly1-defective cells.

Authors:  Chengcheng Huang; Yoichiro Harada; Akira Hosomi; Yuki Masahara-Negishi; Junichi Seino; Haruhiko Fujihira; Yoko Funakoshi; Takehiro Suzuki; Naoshi Dohmae; Tadashi Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-20       Impact factor: 11.205

3.  Capillary (Gel) Electrophoresis-Based Methods for Immunoglobulin (G) Glycosylation Analysis.

Authors:  Samanta Cajic; René Hennig; Robert Burock; Erdmann Rapp
Journal:  Exp Suppl       Date:  2021

4.  Combining functional metagenomics and glycoanalytics to identify enzymes that facilitate structural characterization of sulfated N-glycans.

Authors:  Léa Chuzel; Samantha L Fossa; Madison L Boisvert; Samanta Cajic; René Hennig; Mehul B Ganatra; Udo Reichl; Erdmann Rapp; Christopher H Taron
Journal:  Microb Cell Fact       Date:  2021-08-21       Impact factor: 5.328

5.  PslG, a self-produced glycosyl hydrolase, triggers biofilm disassembly by disrupting exopolysaccharide matrix.

Authors:  Shan Yu; Tiantian Su; Huijun Wu; Shiheng Liu; Di Wang; Tianhu Zhao; Zengjun Jin; Wenbin Du; Mei-Jun Zhu; Song Lin Chua; Liang Yang; Deyu Zhu; Lichuan Gu; Luyan Z Ma
Journal:  Cell Res       Date:  2015-11-27       Impact factor: 25.617

6.  Lacto-N-biosidase encoded by a novel gene of Bifidobacterium longum subspecies longum shows unique substrate specificity and requires a designated chaperone for its active expression.

Authors:  Haruko Sakurama; Masashi Kiyohara; Jun Wada; Yuji Honda; Masanori Yamaguchi; Satoru Fukiya; Atsushi Yokota; Hisashi Ashida; Hidehiko Kumagai; Motomitsu Kitaoka; Kenji Yamamoto; Takane Katayama
Journal:  J Biol Chem       Date:  2013-07-10       Impact factor: 5.157

Review 7.  Early Stage Glycosylation Biomarkers in Alzheimer's Disease.

Authors:  Patricia Regan; Paula L McClean; Thomas Smyth; Margaret Doherty
Journal:  Medicines (Basel)       Date:  2019-09-03

Review 8.  A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry-Based Glycoproteomics.

Authors:  Nicholas M Riley; Carolyn R Bertozzi; Sharon J Pitteri
Journal:  Mol Cell Proteomics       Date:  2020-12-20       Impact factor: 5.911

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.