Literature DB >> 23473101

"Reverse" carbocyclic fleximers: synthesis of a new class of adenosine deaminase inhibitors.

Sarah C Zimmermann1, Joshua M Sadler, Peter I O'Daniel, Nathaniel T Kim, Katherine L Seley-Radtke.   

Abstract

A series of flexible carbocyclic pyrimidine nucleosides has been designed and synthesized. In contrast to previously reported "fleximers" from our laboratory, these analogues have the connectivity of the heterocyclic base system "reversed", where the pyrimidine ring is attached to the sugar moiety, rather than the five membered imidazole ring. As was previously seen with the ribose fleximers, their inherent flexibility should allow them to adjust to enzyme binding site mutations, as well as increase the affinity for atypical enzymes. Preliminary biological screening has revealed surprising inhibition of adenosine deaminase, despite their lack of resemblance to adenosine.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23473101      PMCID: PMC3712750          DOI: 10.1080/15257770.2013.771187

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  39 in total

1.  "Fleximers". Design and synthesis of two novel split nucleosides.

Authors:  K L Seley; L Zhang; A Hagos
Journal:  Org Lett       Date:  2001-10-04       Impact factor: 6.005

2.  2'-O,4'-C-Methylene bridged nucleic acid (2',4'-BNA): synthesis and triplex-forming properties.

Authors:  S Obika; T Uneda; T Sugimoto; D Nanbu; T Minami; T Doi; T Imanishi
Journal:  Bioorg Med Chem       Date:  2001-04       Impact factor: 3.641

3.  On the detection of multiple-binding modes of ligands to proteins, from biological, structural, and modeling data.

Authors:  Paul J Lewi; Marc de Jonge; Frits Daeyaert; Luc Koymans; Maarten Vinkers; Jan Heeres; Paul A J Janssen; Eddy Arnold; Kalyan Das; Art D Clark; Stephen H Hughes; Paul L Boyer; Marie-Pierre de Béthune; Rudi Pauwels; Koen Andries; Mike Kukla; Donald Ludovici; Bart De Corte; Robert Kavash; Chih Ho; Paul J Lewis
Journal:  J Comput Aided Mol Des       Date:  2003 Feb-Apr       Impact factor: 3.686

4.  Biological activities of 3-isoadenosine.

Authors:  K Gerzon; I S Johnson; G B Boder; J C Cline; P J Simpson; C Speth; N J Leonard; R A Laursen
Journal:  Biochim Biophys Acta       Date:  1966-06-22

Review 5.  S-adenosylhomocysteine hydrolase inhibitors as broad-spectrum antiviral agents.

Authors:  E De Clercq
Journal:  Biochem Pharmacol       Date:  1987-08-15       Impact factor: 5.858

6.  Reinforcement of antitumor effect of Cordyceps sinensis by 2'-deoxycoformycin, an adenosine deaminase inhibitor.

Authors:  Noriko Yoshikawa; Kazuki Nakamura; Yu Yamaguchi; Satomi Kagota; Kazumasa Shinozuka; Masaru Kunitomo
Journal:  In Vivo       Date:  2007 Mar-Apr       Impact factor: 2.155

7.  Purinogenic immunodeficiency diseases. Differential effects of deoxyadenosine and deoxyguanosine on DNA synthesis in human T lymphoblasts.

Authors:  J M Wilson; B S Mitchell; P E Daddona; W N Kelley
Journal:  J Clin Invest       Date:  1979-11       Impact factor: 14.808

8.  Unexpected inhibition of S-adenosyl-L-homocysteine hydrolase by a guanosine nucleoside.

Authors:  Katherine L Seley; Stephen Quirk; Samer Salim; Liang Zhang; Asmerom Hagos
Journal:  Bioorg Med Chem Lett       Date:  2003-06-16       Impact factor: 2.823

9.  Structure of bovine adenosine deaminase complexed with 6-hydroxy-1,6-dihydropurine riboside.

Authors:  Takayoshi Kinoshita; Nobuya Nishio; Isao Nakanishi; Akihiro Sato; Takashi Fujii
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-01-23

10.  Contributions of active site residues to the partial and overall catalytic activities of human S-adenosylhomocysteine hydrolase.

Authors:  Philip Elrod; Jinsong Zhang; Xiaoda Yang; Dan Yin; Yongbo Hu; Ronald T Borchardt; Richard L Schowen
Journal:  Biochemistry       Date:  2002-06-25       Impact factor: 3.162

View more
  10 in total

1.  New Analogues of Uridine as Possible Anti-Viral Agents Specific to SARS-CoV-2.

Authors:  A A Maslova; E C Matyugina; E Yu Shustova; V P Volok; L I Kozlovskaya; S N Kochetkov; A L Khandazhinskaya
Journal:  Mol Biol       Date:  2022-06-03       Impact factor: 1.540

2.  Nucleoside Analogs with Fleximer Nucleobase.

Authors:  Mikhail V Chudinov
Journal:  Chem Heterocycl Compd (N Y)       Date:  2020-07-16       Impact factor: 1.277

3.  Identification of Adenosine Deaminase Inhibitors by Metal-binding Pharmacophore Screening.

Authors:  Rebecca N Adamek; Paul Ludford; Stephanie M Duggan; Yitzhak Tor; Seth M Cohen
Journal:  ChemMedChem       Date:  2020-10-14       Impact factor: 3.466

4.  Beta-hydroxyphosphonate ribonucleoside analogues derived from 4-substituted-1,2,3-triazoles as IMP/GMP mimics: synthesis and biological evaluation.

Authors:  Tai Nguyen Van; Audrey Hospital; Corinne Lionne; Lars P Jordheim; Charles Dumontet; Christian Périgaud; Laurent Chaloin; Suzanne Peyrottes
Journal:  Beilstein J Org Chem       Date:  2016-07-18       Impact factor: 2.883

Review 5.  Flexibility-Not just for yoga anymore!

Authors:  Katherine Seley-Radtke
Journal:  Antivir Chem Chemother       Date:  2018 Jan-Dec

6.  Design and synthesis of a series of truncated neplanocin fleximers.

Authors:  Sarah C Zimmermann; Elizaveta O'Neill; Godwin U Ebiloma; Lynsey J M Wallace; Harry P De Koning; Katherine L Seley-Radtke
Journal:  Molecules       Date:  2014-12-16       Impact factor: 4.411

7.  Synthesis of distal and proximal fleximer base analogues and evaluation in the nucleocapsid protein of HIV-1.

Authors:  Therese Ku; Natalie Lopresti; Matthew Shirley; Mattia Mori; Jan Marchant; Xiao Heng; Maurizio Botta; Michael F Summers; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem       Date:  2019-05-15       Impact factor: 3.641

Review 8.  The evolution of nucleoside analogue antivirals: A review for chemists and non-chemists. Part 1: Early structural modifications to the nucleoside scaffold.

Authors:  Katherine L Seley-Radtke; Mary K Yates
Journal:  Antiviral Res       Date:  2018-04-10       Impact factor: 10.103

9.  Probing the Effects of Pyrimidine Functional Group Switches on Acyclic Fleximer Analogues for Antiviral Activity.

Authors:  Mary K Yates; Payel Chatterjee; Mike Flint; Yafet Arefeayne; Damjan Makuc; Janez Plavec; Christina F Spiropoulou; Katherine L Seley-Radtke
Journal:  Molecules       Date:  2019-09-02       Impact factor: 4.411

Review 10.  The evolution of antiviral nucleoside analogues: A review for chemists and non-chemists. Part II: Complex modifications to the nucleoside scaffold.

Authors:  Mary K Yates; Katherine L Seley-Radtke
Journal:  Antiviral Res       Date:  2018-12-08       Impact factor: 10.103

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.