Literature DB >> 23470515

Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper)thermophilic lineages related to Thaumarchaeota.

Laura Eme1, Laila J Reigstad, Anja Spang, Anders Lanzén, Thomas Weinmaier, Thomas Rattei, Christa Schleper, Céline Brochier-Armanet.   

Abstract

Based on phylogenetic analyses and gene distribution patterns of a few complete genomes, a new distinct phylum within the Archaea, the Thaumarchaeota, has recently been proposed. Here we present analyses of six archaeal fosmid sequences derived from a microbial hot spring community in Kamchatka. The phylogenetic analysis of informational components (ribosomal RNAs and proteins) reveals two major (hyper-)thermophilic clades ("Hot Thaumarchaeota-related Clade" 1 and 2, HTC1 and HTC2) related to Thaumarchaeota, representing either deep branches of this phylum or a new archaeal phylum and provides information regarding the ancient evolution of Archaea and their evolutionary links with Eukaryotes.
Copyright © 2013 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

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Year:  2013        PMID： 23470515     DOI： 10.1016/j.resmic.2013.02.006

Source DB:  PubMed          Journal:  Res Microbiol        ISSN： 0923-2508            Impact factor:   3.992


  12 in total

1.  Microbial life in Bourlyashchy, the hottest thermal pool of Uzon Caldera, Kamchatka.

Authors:  Nikolay A Chernyh; Andrey V Mardanov; Vadim M Gumerov; Margarita L Miroshnichenko; Alexander V Lebedinsky; Alexander Y Merkel; Douglas Crowe; Nikolay V Pimenov; Igor I Rusanov; Nikolay V Ravin; Mary Ann Moran; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2015-09-08       Impact factor: 2.395

2.  Niche specialization of novel Thaumarchaeota to oxic and hypoxic acidic geothermal springs of Yellowstone National Park.

Authors:  Jacob P Beam; Zackary J Jay; Mark A Kozubal; William P Inskeep
Journal:  ISME J       Date:  2013-11-07       Impact factor: 10.302

Review 3.  The growing tree of Archaea: new perspectives on their diversity, evolution and ecology.

Authors:  Panagiotis S Adam; Guillaume Borrel; Céline Brochier-Armanet; Simonetta Gribaldo
Journal:  ISME J       Date:  2017-08-04       Impact factor: 10.302

Review 4.  Archaea and the origin of eukaryotes.

Authors:  Laura Eme; Anja Spang; Jonathan Lombard; Courtney W Stairs; Thijs J G Ettema
Journal:  Nat Rev Microbiol       Date:  2017-11-10       Impact factor: 60.633

Review 5.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

6.  Environmental genes and genomes: understanding the differences and challenges in the approaches and software for their analyses.

Authors:  Marie Lisandra Zepeda Mendoza; Thomas Sicheritz-Pontén; M Thomas P Gilbert
Journal:  Brief Bioinform       Date:  2015-02-11       Impact factor: 11.622

7.  Impact of Lowland Rainforest Transformation on Diversity and Composition of Soil Prokaryotic Communities in Sumatra (Indonesia).

Authors:  Dominik Schneider; Martin Engelhaupt; Kara Allen; Syahrul Kurniawan; Valentyna Krashevska; Melanie Heinemann; Heiko Nacke; Marini Wijayanti; Anja Meryandini; Marife D Corre; Stefan Scheu; Rolf Daniel
Journal:  Front Microbiol       Date:  2015-12-08       Impact factor: 5.640

8.  Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota.

Authors:  Michaela Stieglmeier; Andreas Klingl; Ricardo J E Alves; Simon K-M R Rittmann; Michael Melcher; Nikolaus Leisch; Christa Schleper
Journal:  Int J Syst Evol Microbiol       Date:  2014-06-06       Impact factor: 2.747

9.  Candidatus Nitrosocaldus cavascurensis, an Ammonia Oxidizing, Extremely Thermophilic Archaeon with a Highly Mobile Genome.

Authors:  Sophie S Abby; Michael Melcher; Melina Kerou; Mart Krupovic; Michaela Stieglmeier; Claudia Rossel; Kevin Pfeifer; Christa Schleper
Journal:  Front Microbiol       Date:  2018-01-26       Impact factor: 5.640

Review 10.  The universal tree of life: an update.

Authors:  Patrick Forterre
Journal:  Front Microbiol       Date:  2015-07-21       Impact factor: 5.640
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