Literature DB >> 23468786

[3-Benzoyl-2,4-bis-(3-nitro-phen-yl)cyclo-but-yl](phen-yl)methanone.

Prakash S Nayak1, Badiadka Narayana, Hemmige S Yathirajan, Thomas Gerber, Eric Hosten, Richard Betz.   

Abstract

The asymmetric unit of the title compound, C30H22N2O6, comprises a half-mol-ecule of the cyclo-butane derivative. The least-squares planes defined by the respective C atoms of the aromatic substituents inter-sect at angles of 76.81 (7) and 89.22 (8)° with the least-squares plane defined by the C atoms of the cyclo-butane ring. In the crystal, C-H⋯O contacts connect the mol-ecules into a three-dimensional network. The shortest centroid-centroid distance between the two different aromatic rings is 3.9601 (8) Å.

Entities:  

Year:  2012        PMID: 23468786      PMCID: PMC3588821          DOI: 10.1107/S1600536812044650

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of chalcones and cyclo­butane-derived compounds, see: Dimmock et al. (1999 ▶); Marais et al. (2005 ▶); Katerere et al. (2004 ▶); Seidel et al. (2000 ▶). For the crystal structures of similar compounds, see: Zheng et al. (2001 ▶); Zhuang & Zheng (2002 ▶). For general information about the dimerization of chalcones, see: Stobbe & Bremer (1929 ▶); Mustafa (1952 ▶). For puckering analysis of cyclic motifs, see: Cremer & Pople (1975 ▶). For graph-set analysis of hydrogen bonds, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C30H22N2O6 M = 506.50 Monoclinic, a = 5.7850 (1) Å b = 14.7824 (3) Å c = 14.3589 (3) Å β = 104.858 (1)° V = 1186.86 (4) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 200 K 0.33 × 0.14 × 0.11 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.968, T max = 0.989 11005 measured reflections 2945 independent reflections 2387 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.111 S = 1.03 2945 reflections 172 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812044650/fj2603sup1.cif Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812044650/fj2603Isup2.cdx Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812044650/fj2603Isup3.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812044650/fj2603Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C30H22N2O6F(000) = 528
Mr = 506.50Dx = 1.417 Mg m3
Monoclinic, P21/cMelting point > 523 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 5.7850 (1) ÅCell parameters from 4849 reflections
b = 14.7824 (3) Åθ = 2.8–28.3°
c = 14.3589 (3) ŵ = 0.10 mm1
β = 104.858 (1)°T = 200 K
V = 1186.86 (4) Å3Block, colourless
Z = 20.33 × 0.14 × 0.11 mm
Bruker APEXII CCD diffractometer2945 independent reflections
Radiation source: fine-focus sealed tube2387 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
φ and ω scansθmax = 28.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −7→7
Tmin = 0.968, Tmax = 0.989k = −17→19
11005 measured reflectionsl = −17→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.055P)2 + 0.3935P] where P = (Fo2 + 2Fc2)/3
2945 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.22 e Å3
xyzUiso*/Ueq
O10.02716 (16)0.08341 (7)0.41101 (7)0.0343 (2)
O20.4112 (3)0.11125 (12)0.89447 (9)0.0693 (4)
O30.6594 (3)0.21980 (8)0.94461 (8)0.0584 (4)
N10.5674 (2)0.16321 (9)0.88471 (8)0.0386 (3)
C10.2098 (2)0.07918 (8)0.38436 (8)0.0223 (2)
C20.4494 (2)0.05901 (8)0.45303 (8)0.0206 (2)
H20.56840.10740.45060.025*
C30.44539 (19)0.03813 (8)0.55776 (8)0.0203 (2)
H30.27670.03310.56290.024*
C110.2032 (2)0.09061 (8)0.28021 (8)0.0224 (2)
C120.3971 (2)0.12395 (9)0.24994 (9)0.0266 (3)
H120.54140.13910.29600.032*
C130.3792 (2)0.13495 (10)0.15237 (9)0.0333 (3)
H130.50960.15960.13180.040*
C140.1718 (3)0.11009 (11)0.08487 (10)0.0371 (3)
H140.16070.11730.01810.045*
C15−0.0192 (2)0.07487 (10)0.11440 (9)0.0358 (3)
H15−0.15990.05650.06800.043*
C16−0.0049 (2)0.06645 (9)0.21178 (9)0.0287 (3)
H16−0.13810.04400.23200.034*
C210.5883 (2)0.09762 (8)0.63665 (8)0.0209 (2)
C220.5151 (2)0.10549 (8)0.72138 (8)0.0245 (2)
H220.37360.07620.72750.029*
C230.6502 (2)0.15632 (8)0.79654 (9)0.0276 (3)
C240.8559 (2)0.20118 (9)0.79156 (9)0.0319 (3)
H240.94470.23620.84410.038*
C250.9279 (2)0.19330 (9)0.70728 (10)0.0307 (3)
H251.06840.22350.70150.037*
C260.7973 (2)0.14165 (8)0.63095 (9)0.0254 (2)
H260.85120.13630.57400.030*
U11U22U33U12U13U23
O10.0268 (4)0.0478 (6)0.0298 (5)0.0065 (4)0.0101 (4)0.0091 (4)
O20.0738 (9)0.1032 (12)0.0425 (7)−0.0292 (8)0.0360 (6)−0.0212 (7)
O30.1001 (10)0.0466 (7)0.0285 (5)−0.0007 (7)0.0169 (6)−0.0144 (5)
N10.0505 (7)0.0419 (7)0.0239 (5)0.0073 (6)0.0106 (5)−0.0050 (5)
C10.0250 (5)0.0196 (5)0.0222 (5)0.0009 (4)0.0059 (4)0.0023 (4)
C20.0227 (5)0.0199 (5)0.0194 (5)−0.0018 (4)0.0059 (4)0.0002 (4)
C30.0206 (5)0.0219 (5)0.0185 (5)−0.0005 (4)0.0056 (4)0.0006 (4)
C110.0246 (5)0.0210 (5)0.0214 (5)0.0035 (4)0.0055 (4)0.0027 (4)
C120.0244 (6)0.0290 (6)0.0265 (6)0.0013 (5)0.0064 (4)0.0031 (5)
C130.0318 (6)0.0419 (7)0.0296 (6)0.0041 (6)0.0144 (5)0.0068 (6)
C140.0405 (7)0.0497 (8)0.0218 (6)0.0089 (6)0.0091 (5)0.0023 (6)
C150.0335 (7)0.0455 (8)0.0248 (6)0.0003 (6)0.0007 (5)−0.0029 (6)
C160.0258 (6)0.0320 (6)0.0276 (6)−0.0006 (5)0.0052 (5)0.0021 (5)
C210.0237 (5)0.0190 (5)0.0197 (5)0.0025 (4)0.0050 (4)0.0000 (4)
C220.0267 (6)0.0241 (6)0.0237 (5)0.0019 (4)0.0085 (4)0.0000 (4)
C230.0355 (6)0.0259 (6)0.0213 (6)0.0055 (5)0.0073 (5)−0.0017 (5)
C240.0373 (7)0.0256 (6)0.0280 (6)−0.0008 (5)−0.0004 (5)−0.0050 (5)
C250.0284 (6)0.0266 (6)0.0354 (7)−0.0052 (5)0.0050 (5)−0.0005 (5)
C260.0263 (6)0.0244 (6)0.0260 (6)−0.0003 (4)0.0076 (4)0.0009 (5)
O1—C11.2141 (15)C13—H130.9500
O2—N11.2210 (19)C14—C151.383 (2)
O3—N11.2199 (16)C14—H140.9500
N1—C231.4676 (17)C15—C161.3850 (18)
C1—C111.4957 (16)C15—H150.9500
C1—C21.5104 (15)C16—H160.9500
C2—C31.5412 (15)C21—C221.3917 (16)
C2—C3i1.5827 (16)C21—C261.3938 (17)
C2—H21.0000C22—C231.3810 (17)
C3—C211.5032 (15)C22—H220.9500
C3—C2i1.5827 (16)C23—C241.380 (2)
C3—H31.0000C24—C251.382 (2)
C11—C161.3910 (16)C24—H240.9500
C11—C121.3931 (17)C25—C261.3895 (17)
C12—C131.3877 (17)C25—H250.9500
C12—H120.9500C26—H260.9500
C13—C141.385 (2)
O3—N1—O2123.53 (13)C15—C14—C13120.16 (12)
O3—N1—C23118.42 (13)C15—C14—H14119.9
O2—N1—C23118.05 (12)C13—C14—H14119.9
O1—C1—C11120.53 (10)C14—C15—C16119.85 (12)
O1—C1—C2122.11 (10)C14—C15—H15120.1
C11—C1—C2117.32 (10)C16—C15—H15120.1
C1—C2—C3115.82 (9)C15—C16—C11120.46 (12)
C1—C2—C3i115.26 (9)C15—C16—H16119.8
C3—C2—C3i90.93 (8)C11—C16—H16119.8
C1—C2—H2111.1C22—C21—C26118.37 (10)
C3—C2—H2111.1C22—C21—C3118.42 (10)
C3i—C2—H2111.1C26—C21—C3123.13 (10)
C21—C3—C2118.37 (9)C23—C22—C21119.39 (12)
C21—C3—C2i116.97 (9)C23—C22—H22120.3
C2—C3—C2i89.07 (8)C21—C22—H22120.3
C21—C3—H3110.3C24—C23—C22122.92 (12)
C2—C3—H3110.3C24—C23—N1119.20 (11)
C2i—C3—H3110.3C22—C23—N1117.87 (12)
C16—C11—C12119.38 (11)C23—C24—C25117.54 (11)
C16—C11—C1118.23 (11)C23—C24—H24121.2
C12—C11—C1122.39 (10)C25—C24—H24121.2
C13—C12—C11119.94 (11)C24—C25—C26120.79 (12)
C13—C12—H12120.0C24—C25—H25119.6
C11—C12—H12120.0C26—C25—H25119.6
C14—C13—C12120.16 (12)C25—C26—C21120.99 (11)
C14—C13—H13119.9C25—C26—H26119.5
C12—C13—H13119.9C21—C26—H26119.5
O1—C1—C2—C33.75 (16)C1—C11—C16—C15−179.34 (12)
C11—C1—C2—C3−174.02 (9)C2—C3—C21—C22153.77 (10)
O1—C1—C2—C3i108.12 (13)C2i—C3—C21—C22−101.51 (12)
C11—C1—C2—C3i−69.65 (13)C2—C3—C21—C26−29.57 (16)
C1—C2—C3—C21−120.73 (11)C2i—C3—C21—C2675.16 (14)
C3i—C2—C3—C21120.45 (11)C26—C21—C22—C230.10 (17)
C1—C2—C3—C2i118.82 (11)C3—C21—C22—C23176.93 (11)
C3i—C2—C3—C2i0.0C21—C22—C23—C240.70 (19)
O1—C1—C11—C16−28.05 (17)C21—C22—C23—N1179.91 (11)
C2—C1—C11—C16149.76 (11)O3—N1—C23—C2411.86 (19)
O1—C1—C11—C12152.23 (12)O2—N1—C23—C24−167.48 (14)
C2—C1—C11—C12−29.96 (16)O3—N1—C23—C22−167.39 (13)
C16—C11—C12—C131.65 (18)O2—N1—C23—C2213.3 (2)
C1—C11—C12—C13−178.63 (12)C22—C23—C24—C25−0.62 (19)
C11—C12—C13—C14−2.1 (2)N1—C23—C24—C25−179.82 (12)
C12—C13—C14—C150.5 (2)C23—C24—C25—C26−0.24 (19)
C13—C14—C15—C161.5 (2)C24—C25—C26—C211.03 (19)
C14—C15—C16—C11−2.0 (2)C22—C21—C26—C25−0.94 (18)
C12—C11—C16—C150.39 (19)C3—C21—C26—C25−177.61 (11)
D—H···AD—HH···AD···AD—H···A
C3—H3···O11.002.402.8509 (14)106
C3—H3···O1ii1.002.563.3957 (15)141
C14—H14···O2iii0.952.563.3666 (19)142
C2—H2···O3iv1.002.613.5009 (17)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯O1i 1.002.563.3957 (15)141
C14—H14⋯O2ii 0.952.563.3666 (19)142
C2—H2⋯O3iii 1.002.613.5009 (17)148

Symmetry codes: (i) ; (ii) ; (iii) .

  7 in total

Review 1.  Bioactivities of chalcones.

Authors:  J R Dimmock; D W Elias; M A Beazely; N M Kandepu
Journal:  Curr Med Chem       Date:  1999-12       Impact factor: 4.530

Review 2.  Stereoselective synthesis of monomeric flavonoids.

Authors:  Jannie P J Marais; Daneel Ferreira; Desmond Slade
Journal:  Phytochemistry       Date:  2005-09       Impact factor: 4.072

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

5.  (Rel)-1beta,2alpha-di-(2,4-dihydroxy-6-methoxybenzoyl)-3beta, 4alpha-di-(4-methoxyphenyl)-cyclobutane and other flavonoids from the aerial parts of Goniothalamus gardneri and Goniothalamus thwaitesii.

Authors:  V Seidel; F Bailleul; P G Waterman
Journal:  Phytochemistry       Date:  2000-11       Impact factor: 4.072

6.  Cyclobutanes from Combretum albopunctatum.

Authors:  David R Katerere; Alexander I Gray; Alan R Kennedy; Robert J Nash; Roger D Waigh
Journal:  Phytochemistry       Date:  2004-02       Impact factor: 4.072

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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