Literature DB >> 23468753

Bis[μ-(E)-N-(pyridin-3-yl-methyl-idene)hy-droxy-amine]-κ(2) N (1):N (3);κ(2) N (3):N (1)-bis-{[(E)-N-(pyridin-3-yl-methyl-idene-κN)hy-droxy-amine]-silver(I)} dinitrate.

Shan Gao1, Seik Weng Ng.   

Abstract

In the centrosymmetric dinuclear title Ag(I) compound, [Ag2(C6H6N2O)4](NO3)2, the aromatic amine-coordinated Ag(I) atom is further bridged by two hydroxyl-amine mol-ecules that use aromatic and oxime N atoms for bridging, and it exists in a distorted trigonal-planar geometry. In the crystal, the nitrate anions link to the dinuclear compound mol-ecules via O-H⋯O hydrogen bonds, generating a chain running along the a-axis direction.

Entities:  

Year:  2012        PMID: 23468753      PMCID: PMC3588788          DOI: 10.1107/S1600536812045898

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bis­(nicotinyl­aldehyde oxime)silver perchlorate, see: Xu et al. (2012 ▶) and for (nitrato)(picolinaldehyde oxime)silver, see: Abu-Youssef et al. (2010 ▶).

Experimental

Crystal data

[Ag2(C6H6N2O)4](NO3)2 M = 828.27 Triclinic, a = 7.2913 (10) Å b = 8.3395 (10) Å c = 13.1415 (17) Å α = 92.934 (4)° β = 95.008 (4)° γ = 111.360 (3)° V = 738.38 (16) Å3 Z = 1 Mo Kα radiation μ = 1.40 mm−1 T = 293 K 0.24 × 0.21 × 0.17 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.730, T max = 0.797 7293 measured reflections 3341 independent reflections 2896 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.107 S = 1.11 3341 reflections 210 parameters H-atom parameters constrained Δρmax = 1.71 e Å−3 Δρmin = −0.34 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812045898/xu5646sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812045898/xu5646Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag2(C6H6N2O)4](NO3)2Z = 1
Mr = 828.27F(000) = 412
Triclinic, P1Dx = 1.863 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.2913 (10) ÅCell parameters from 6130 reflections
b = 8.3395 (10) Åθ = 3.0–27.4°
c = 13.1415 (17) ŵ = 1.40 mm1
α = 92.934 (4)°T = 293 K
β = 95.008 (4)°Prism, colorless
γ = 111.360 (3)°0.24 × 0.21 × 0.17 mm
V = 738.38 (16) Å3
Rigaku R-AXIS RAPID IP diffractometer3341 independent reflections
Radiation source: fine-focus sealed tube2896 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
ω scanθmax = 27.4°, θmin = 3.0°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −9→9
Tmin = 0.730, Tmax = 0.797k = −10→10
7293 measured reflectionsl = −17→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.056P)2 + 0.3361P] where P = (Fo2 + 2Fc2)/3
3341 reflections(Δ/σ)max = 0.001
210 parametersΔρmax = 1.71 e Å3
0 restraintsΔρmin = −0.34 e Å3
xyzUiso*/Ueq
Ag10.38614 (4)0.61092 (3)0.314850 (18)0.04700 (13)
O11.0366 (4)0.7195 (3)0.7651 (2)0.0501 (6)
H11.07580.63780.75410.075*
O20.9485 (4)1.1845 (3)−0.0856 (2)0.0522 (6)
H20.94511.2272−0.14190.078*
O30.7359 (7)0.5156 (5)0.3151 (4)0.1102 (16)
O41.0106 (5)0.6444 (5)0.2602 (3)0.0751 (10)
O50.8581 (6)0.7867 (4)0.3354 (3)0.0792 (10)
N10.4261 (4)0.7161 (4)0.4767 (2)0.0393 (6)
N20.8633 (4)0.6911 (4)0.7003 (2)0.0426 (6)
N30.4227 (4)0.6552 (4)0.1507 (2)0.0393 (6)
N40.7795 (4)1.0353 (4)−0.0856 (2)0.0411 (6)
N50.8690 (4)0.6504 (4)0.3059 (2)0.0436 (7)
C10.2918 (5)0.5528 (4)0.0748 (3)0.0420 (7)
H1A0.18750.45740.09150.050*
C20.3047 (5)0.5827 (4)−0.0277 (3)0.0438 (7)
H2A0.21040.5087−0.07830.053*
C30.4576 (5)0.7221 (4)−0.0537 (3)0.0410 (7)
H30.46890.7437−0.12200.049*
C40.5962 (5)0.8315 (4)0.0240 (2)0.0354 (6)
C50.5728 (5)0.7911 (4)0.1242 (2)0.0366 (6)
H50.66630.86210.17620.044*
C60.7622 (5)0.9865 (4)0.0046 (3)0.0375 (7)
H60.85591.04990.05860.045*
C70.3097 (5)0.7957 (4)0.5116 (3)0.0430 (7)
H70.19440.78530.47080.052*
C80.3541 (5)0.8913 (4)0.6046 (3)0.0429 (7)
H80.27210.94670.62560.051*
C90.5228 (5)0.9041 (4)0.6669 (3)0.0407 (7)
H90.55700.97040.72960.049*
C100.6402 (5)0.8177 (4)0.6350 (2)0.0361 (6)
C110.5871 (5)0.7270 (4)0.5384 (2)0.0369 (6)
H110.66750.67130.51560.044*
C120.8170 (5)0.8228 (4)0.6996 (2)0.0396 (7)
H120.89520.92340.74010.048*
U11U22U33U12U13U23
Ag10.05390 (19)0.0543 (2)0.03057 (17)0.01848 (14)0.00080 (12)0.00222 (11)
O10.0459 (13)0.0570 (15)0.0475 (15)0.0220 (12)−0.0050 (11)0.0026 (11)
O20.0459 (13)0.0490 (14)0.0565 (16)0.0103 (11)0.0045 (12)0.0153 (12)
O30.101 (3)0.062 (2)0.155 (5)0.007 (2)0.035 (3)0.043 (3)
O40.0682 (19)0.124 (3)0.062 (2)0.064 (2)0.0219 (16)0.034 (2)
O50.100 (3)0.0675 (19)0.079 (2)0.0441 (19)0.009 (2)−0.0041 (16)
N10.0458 (14)0.0412 (14)0.0277 (13)0.0131 (12)0.0010 (11)0.0040 (10)
N20.0430 (14)0.0408 (14)0.0401 (15)0.0129 (12)−0.0037 (12)0.0043 (11)
N30.0400 (14)0.0462 (15)0.0333 (14)0.0179 (12)0.0039 (11)0.0034 (11)
N40.0401 (14)0.0401 (14)0.0439 (16)0.0154 (12)0.0063 (12)0.0039 (12)
N50.0483 (16)0.0521 (17)0.0383 (15)0.0257 (15)0.0081 (13)0.0138 (13)
C10.0393 (16)0.0407 (17)0.0425 (18)0.0106 (14)0.0054 (14)0.0021 (13)
C20.0442 (17)0.0446 (17)0.0386 (18)0.0150 (15)−0.0037 (14)−0.0056 (14)
C30.0471 (18)0.0475 (18)0.0297 (15)0.0197 (15)0.0012 (14)0.0024 (13)
C40.0349 (14)0.0415 (16)0.0328 (15)0.0178 (13)0.0035 (12)0.0027 (12)
C50.0352 (15)0.0437 (16)0.0310 (15)0.0163 (13)−0.0002 (12)−0.0023 (12)
C60.0367 (15)0.0424 (16)0.0373 (17)0.0203 (14)0.0013 (13)0.0012 (13)
C70.0394 (16)0.0468 (17)0.0443 (19)0.0166 (15)0.0061 (14)0.0098 (14)
C80.0470 (17)0.0457 (18)0.0413 (18)0.0210 (15)0.0138 (15)0.0082 (14)
C90.0530 (19)0.0390 (16)0.0322 (16)0.0188 (15)0.0093 (14)0.0022 (12)
C100.0424 (16)0.0309 (14)0.0319 (15)0.0097 (13)0.0039 (13)0.0057 (11)
C110.0439 (16)0.0315 (14)0.0356 (16)0.0141 (13)0.0066 (13)0.0021 (12)
C120.0455 (17)0.0385 (16)0.0315 (16)0.0129 (14)0.0015 (13)−0.0022 (12)
Ag1—N12.212 (3)C2—C31.369 (5)
Ag1—N32.229 (3)C2—H2A0.9300
Ag1—N2i2.498 (3)C3—C41.396 (5)
O1—N21.397 (4)C3—H30.9300
O1—H10.8400C4—C51.385 (4)
O2—N41.396 (4)C4—C61.466 (5)
O2—H20.8400C5—H50.9300
O3—N51.208 (5)C6—H60.9300
O4—N51.255 (4)C7—C81.370 (5)
O5—N51.214 (4)C7—H70.9300
N1—C111.339 (4)C8—C91.383 (5)
N1—C71.349 (5)C8—H80.9300
N2—C121.262 (4)C9—C101.381 (5)
N2—Ag1i2.498 (3)C9—H90.9300
N3—C11.337 (5)C10—C111.392 (4)
N3—C51.344 (4)C10—C121.466 (5)
N4—C61.274 (4)C11—H110.9300
C1—C21.387 (5)C12—H120.9300
C1—H1A0.9300
N1—Ag1—N3149.49 (11)C5—C4—C3117.7 (3)
N1—Ag1—N2i107.79 (10)C5—C4—C6119.0 (3)
N3—Ag1—N2i101.48 (10)C3—C4—C6123.3 (3)
N2—O1—H1109.5N3—C5—C4123.8 (3)
N4—O2—H2109.5N3—C5—H5118.1
C11—N1—C7117.6 (3)C4—C5—H5118.1
C11—N1—Ag1119.9 (2)N4—C6—C4120.7 (3)
C7—N1—Ag1121.6 (2)N4—C6—H6119.6
C12—N2—O1112.4 (3)C4—C6—H6119.6
C12—N2—Ag1i123.3 (2)N1—C7—C8122.8 (3)
O1—N2—Ag1i115.10 (18)N1—C7—H7118.6
C1—N3—C5117.2 (3)C8—C7—H7118.6
C1—N3—Ag1121.6 (2)C7—C8—C9119.0 (3)
C5—N3—Ag1121.1 (2)C7—C8—H8120.5
C6—N4—O2110.6 (3)C9—C8—H8120.5
O3—N5—O5120.1 (4)C10—C9—C8119.5 (3)
O3—N5—O4117.9 (4)C10—C9—H9120.3
O5—N5—O4121.9 (4)C8—C9—H9120.3
N3—C1—C2122.8 (3)C9—C10—C11117.8 (3)
N3—C1—H1A118.6C9—C10—C12121.5 (3)
C2—C1—H1A118.6C11—C10—C12120.6 (3)
C3—C2—C1119.4 (3)N1—C11—C10123.3 (3)
C3—C2—H2A120.3N1—C11—H11118.4
C1—C2—H2A120.3C10—C11—H11118.4
C2—C3—C4119.0 (3)N2—C12—C10120.1 (3)
C2—C3—H3120.5N2—C12—H12119.9
C4—C3—H3120.5C10—C12—H12119.9
N3—Ag1—N1—C11−93.9 (3)O2—N4—C6—C4−179.6 (3)
N2i—Ag1—N1—C11103.1 (2)C5—C4—C6—N4−174.4 (3)
N3—Ag1—N1—C775.2 (3)C3—C4—C6—N44.9 (5)
N2i—Ag1—N1—C7−87.8 (3)C11—N1—C7—C82.6 (5)
N1—Ag1—N3—C1−147.5 (3)Ag1—N1—C7—C8−166.8 (2)
N2i—Ag1—N3—C116.0 (3)N1—C7—C8—C9−1.5 (5)
N1—Ag1—N3—C529.4 (4)C7—C8—C9—C10−1.4 (5)
N2i—Ag1—N3—C5−167.1 (2)C8—C9—C10—C112.9 (4)
C5—N3—C1—C2−0.6 (5)C8—C9—C10—C12−178.1 (3)
Ag1—N3—C1—C2176.4 (3)C7—N1—C11—C10−0.9 (5)
N3—C1—C2—C30.2 (5)Ag1—N1—C11—C10168.7 (2)
C1—C2—C3—C4−0.4 (5)C9—C10—C11—N1−1.8 (5)
C2—C3—C4—C50.9 (5)C12—C10—C11—N1179.2 (3)
C2—C3—C4—C6−178.4 (3)O1—N2—C12—C10179.4 (3)
C1—N3—C5—C41.2 (5)Ag1i—N2—C12—C10−35.6 (4)
Ag1—N3—C5—C4−175.8 (2)C9—C10—C12—N2144.0 (3)
C3—C4—C5—N3−1.4 (5)C11—C10—C12—N2−37.1 (5)
C6—C4—C5—N3178.0 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O3ii0.842.393.189 (6)158
O1—H1···O4ii0.842.202.925 (5)145
O2—H2···O4iii0.841.922.745 (4)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O3i 0.842.393.189 (6)158
O1—H1⋯O4i 0.842.202.925 (5)145
O2—H2⋯O4ii 0.841.922.745 (4)169

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Synthesis, crystal structure, quantum chemical calculations, DNA interactions, and antimicrobial activity of [Ag(2-amino-3-methylpyridine)(2)]NO(3) and [Ag(pyridine-2-carboxaldoxime)NO(3)].

Authors:  Morsy A M Abu-Youssef; Saied M Soliman; Vratislav Langer; Yousry M Gohar; Ahmed A Hasanen; Mohamed A Makhyoun; Amira H Zaky; Lars R Öhrström
Journal:  Inorg Chem       Date:  2010-11-01       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Bis[(E)-N-(pyridin-3-yl-methyl-idene)hydroxyl-amine-κN(1)]silver(I) perchlorate.

Authors:  Jing Xu; Shan Gao; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-05
  3 in total

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