Literature DB >> 23466755

mRNA fate: Life and death of the mRNA in the cytoplasm.

Michela A Denti1, Gabriella Viero, Alessandro Provenzani, Alessandro Quattrone, Paolo Macchi.   

Abstract

The life of an mRNA molecule begins with transcription and ultimately ends in degradation. In the course of its life, however, mRNA is examined, modified in various ways and transported before eventually being translated into proteins. All these processes are performed by proteins and non-coding RNAs whose complex interplay in the cell contributes to determining the proteome changes and the phenotype of cells. On May 23‒26, 2012, over 150 scientists from around the world convened in the sunny shores of Riva del Garda, Italy, for the workshop entitled: "mRNA fate: Life and Death of mRNA in the Cytoplasm." Sessions included mRNA trafficking, mRNA translational control, RNA metabolism and disease, RNA-protein structures and systems biology of RNA. This report highlights some of the prominent and recurring themes at the meeting and emerging arenas of future research.

Entities:  

Keywords:  RNA-binding proteins; deadenylation; mRNA; mRNA decay; mRNA localization; miRNA; polyadenylation; ribosome; translation; translational control

Mesh:

Substances:

Year:  2013        PMID: 23466755      PMCID: PMC3672278          DOI: 10.4161/rna.23770

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  36 in total

1.  PIM1 kinase is destabilized by ribosomal stress causing inhibition of cell cycle progression.

Authors:  V Iadevaia; S Caldarola; L Biondini; A Gismondi; S Karlsson; I Dianzani; F Loreni
Journal:  Oncogene       Date:  2010-07-19       Impact factor: 9.867

2.  RIP-Chip: the isolation and identification of mRNAs, microRNAs and protein components of ribonucleoprotein complexes from cell extracts.

Authors:  Jack D Keene; Jordan M Komisarow; Matthew B Friedersdorf
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

3.  Translational reprogramming following UVB irradiation is mediated by DNA-PKcs and allows selective recruitment to the polysomes of mRNAs encoding DNA repair enzymes.

Authors:  Ian R Powley; Alexander Kondrashov; Lucy A Young; Helen C Dobbyn; Kirsti Hill; Ian G Cannell; Mark Stoneley; Yi-Wen Kong; Julia A Cotes; Graeme C M Smith; Ron Wek; Christopher Hayes; Timothy W Gant; Keith A Spriggs; Martin Bushell; Anne E Willis
Journal:  Genes Dev       Date:  2009-05-15       Impact factor: 11.361

4.  The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation.

Authors:  Fabien Bonneau; Jérôme Basquin; Judith Ebert; Esben Lorentzen; Elena Conti
Journal:  Cell       Date:  2009-10-30       Impact factor: 41.582

5.  Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation.

Authors:  Marc R Fabian; Géraldine Mathonnet; Thomas Sundermeier; Hansruedi Mathys; Jakob T Zipprich; Yuri V Svitkin; Fabiola Rivas; Martin Jinek; James Wohlschlegel; Jennifer A Doudna; Chyi-Ying A Chen; Ann-Bin Shyu; John R Yates; Gregory J Hannon; Witold Filipowicz; Thomas F Duchaine; Nahum Sonenberg
Journal:  Mol Cell       Date:  2009-08-27       Impact factor: 17.970

6.  Tom20 mediates localization of mRNAs to mitochondria in a translation-dependent manner.

Authors:  Erez Eliyahu; Lilach Pnueli; Daniel Melamed; Tanja Scherrer; André P Gerber; Ophry Pines; Doron Rapaport; Yoav Arava
Journal:  Mol Cell Biol       Date:  2010-01       Impact factor: 4.272

7.  A screen for RNA-binding proteins in yeast indicates dual functions for many enzymes.

Authors:  Tanja Scherrer; Nitish Mittal; Sarath Chandra Janga; André P Gerber
Journal:  PLoS One       Date:  2010-11-11       Impact factor: 3.240

8.  Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution.

Authors:  Daniel A Pomeranz Krummel; Chris Oubridge; Adelaine K W Leung; Jade Li; Kiyoshi Nagai
Journal:  Nature       Date:  2009-03-26       Impact factor: 49.962

9.  Crystal structure of a 9-subunit archaeal exosome in pre-catalytic states of the phosphorolytic reaction.

Authors:  Esben Lorentzen; Elena Conti
Journal:  Archaea       Date:  2012-12-20       Impact factor: 3.273

10.  Structural insights into the human GW182-PABC interaction in microRNA-mediated deadenylation.

Authors:  Martin Jinek; Marc R Fabian; Scott M Coyle; Nahum Sonenberg; Jennifer A Doudna
Journal:  Nat Struct Mol Biol       Date:  2010-01-24       Impact factor: 15.369

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  2 in total

Review 1.  Potential Gene Interactions in the Cell Cycles of Gametes, Zygotes, Embryonic Stem Cells and the Development of Cancer.

Authors:  Gregor Prindull
Journal:  Front Oncol       Date:  2015-09-23       Impact factor: 6.244

2.  MicroRNA-320a inhibits invasion and metastasis in osteosarcoma by targeting cytoplasmic polyadenylation element-binding protein 1.

Authors:  Yanlong Wang; Jiyu Yang; Pangtao Chen; Yu Song; Weizheng An; Haoran Zhang; Butegeleqi Butegeleqi; Jinglong Yan
Journal:  Cancer Med       Date:  2020-02-17       Impact factor: 4.452

  2 in total

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