Literature DB >> 23463313

Epigenetic programming and reprogramming during development.

Irene Cantone1, Amanda G Fisher.   

Abstract

Cell identity is determined by specific gene expression patterns that are conveyed by interactions between transcription factors and DNA in the context of chromatin. In development, epigenetic modifiers are thought to stabilize gene expression and ensure that patterns of DNA methylation and histone modification are reinstated in cells as they divide. Global erasure of epigenetic marks occurs naturally at two stages in the mammalian life cycle, but it can also be artificially engineered using a variety of reprogramming strategies. Here we review some of the recent advances in understanding how epigenetic remodeling contributes to conversion of cell fate in vivo and in vitro. We summarize current models of epigenetic erasure and discuss the various enzymes and mechanisms that may operate in cellular reprogramming.

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Year:  2013        PMID: 23463313     DOI: 10.1038/nsmb.2489

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  125 in total

1.  Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation.

Authors:  Gerard L Brien; Guillermo Gambero; David J O'Connell; Emilia Jerman; Siobhán A Turner; Chris M Egan; Eiseart J Dunne; Maike C Jurgens; Kieran Wynne; Lianhua Piao; Amanda J Lohan; Neil Ferguson; Xiaobing Shi; Krishna M Sinha; Brendan J Loftus; Gerard Cagney; Adrian P Bracken
Journal:  Nat Struct Mol Biol       Date:  2012-11-18       Impact factor: 15.369

2.  Differential H4 acetylation of paternal and maternal chromatin precedes DNA replication and differential transcriptional activity in pronuclei of 1-cell mouse embryos.

Authors:  P G Adenot; Y Mercier; J P Renard; E M Thompson
Journal:  Development       Date:  1997-11       Impact factor: 6.868

3.  Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2.

Authors:  Claudia A Doege; Keiichi Inoue; Toru Yamashita; David B Rhee; Skylar Travis; Ryousuke Fujita; Paolo Guarnieri; Govind Bhagat; William B Vanti; Alan Shih; Ross L Levine; Sara Nik; Emily I Chen; Asa Abeliovich
Journal:  Nature       Date:  2012-08-30       Impact factor: 49.962

4.  Requirement of mitoses for the reversal of X-inactivation in cell hybrids between murine embryonal carcinoma cells and normal female thymocytes.

Authors:  N Takagi
Journal:  Exp Cell Res       Date:  1988-04       Impact factor: 3.905

5.  Erasure of methylation imprinting of Igf2r during mouse primordial germ-cell development.

Authors:  Shun Sato; Tomomi Yoshimizu; Eimei Sato; Yasuhisa Matsui
Journal:  Mol Reprod Dev       Date:  2003-05       Impact factor: 2.609

6.  Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway.

Authors:  Petra Hajkova; Sean J Jeffries; Caroline Lee; Nigel Miller; Stephen P Jackson; M Azim Surani
Journal:  Science       Date:  2010-07-02       Impact factor: 47.728

7.  Epigenetic memory and parliamentary privilege combine to evoke discussions on inheritance.

Authors:  Amanda G Fisher; Neil Brockdorff
Journal:  Development       Date:  2012-11       Impact factor: 6.868

8.  Histone variant macroH2A confers resistance to nuclear reprogramming.

Authors:  Vincent Pasque; Astrid Gillich; Nigel Garrett; John B Gurdon
Journal:  EMBO J       Date:  2011-05-06       Impact factor: 11.598

9.  Heterokaryon-based reprogramming of human B lymphocytes for pluripotency requires Oct4 but not Sox2.

Authors:  Carlos F Pereira; Rémi Terranova; Natalie K Ryan; Joana Santos; Kelly J Morris; Wei Cui; Matthias Merkenschlager; Amanda G Fisher
Journal:  PLoS Genet       Date:  2008-09-05       Impact factor: 5.917

10.  X chromosome activity in mouse XX primordial germ cells.

Authors:  Susana M Chuva de Sousa Lopes; Katsuhiko Hayashi; Tanya C Shovlin; Will Mifsud; M Azim Surani; Anne McLaren
Journal:  PLoS Genet       Date:  2008-02       Impact factor: 5.917

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  155 in total

1.  Role of histone deacetylase 9 in regulating adipogenic differentiation and high fat diet-induced metabolic disease.

Authors:  Tapan K Chatterjee; Joshua E Basford; Kan Hui Yiew; David W Stepp; David Y Hui; Neal L Weintraub
Journal:  Adipocyte       Date:  2014-12-10       Impact factor: 4.534

2.  Multi-tiered Reorganization of the Genome during B Cell Affinity Maturation Anchored by a Germinal Center-Specific Locus Control Region.

Authors:  Karen L Bunting; T David Soong; Rajat Singh; Yanwen Jiang; Wendy Béguelin; David W Poloway; Brandon L Swed; Katerina Hatzi; William Reisacher; Matt Teater; Olivier Elemento; Ari M Melnick
Journal:  Immunity       Date:  2016-09-13       Impact factor: 31.745

3.  Psammaplin a improves development and quality of somatic cell nuclear transfer mouse embryos.

Authors:  Anna Mallol; Josep Santaló; Elena Ibáñez
Journal:  Cell Reprogram       Date:  2014-07-28       Impact factor: 1.987

Review 4.  Epigenetics in preimplantation mammalian development.

Authors:  Sebastian Canovas; Pablo Juan Ross
Journal:  Theriogenology       Date:  2016-04-21       Impact factor: 2.740

Review 5.  Autophagy and cell reprogramming.

Authors:  Shuo Wang; Pengyan Xia; Markus Rehm; Zusen Fan
Journal:  Cell Mol Life Sci       Date:  2015-01-09       Impact factor: 9.261

6.  A functional N-terminal domain in C/EBPβ-LAP* is required for interacting with SWI/SNF and to repress Ric-8B gene transcription in osteoblasts.

Authors:  Rodrigo Aguilar; Rodrigo Grandy; Daniel Meza; Hugo Sepulveda; Philippe Pihan; Andre J van Wijnen; Jane B Lian; Gary S Stein; Janet L Stein; Martin Montecino
Journal:  J Cell Physiol       Date:  2014-10       Impact factor: 6.384

Review 7.  The epigenome in Alzheimer's disease: current state and approaches for a new path to gene discovery and understanding disease mechanism.

Authors:  Hans-Ulrich Klein; David A Bennett; Philip L De Jager
Journal:  Acta Neuropathol       Date:  2016-08-29       Impact factor: 17.088

8.  G9a/RelB regulates self-renewal and function of colon-cancer-initiating cells by silencing Let-7b and activating the K-RAS/β-catenin pathway.

Authors:  Shih-Ting Cha; Ching-Ting Tan; Cheng-Chi Chang; Chia-Yu Chu; Wei-Jiunn Lee; Been-Zen Lin; Ming-Tsan Lin; Min-Liang Kuo
Journal:  Nat Cell Biol       Date:  2016-08-15       Impact factor: 28.824

9.  The tissue is the issue: improved methylome analysis from paraffin-embedded tissues by application of the HOPE technique.

Authors:  Sebastian Marwitz; Julia Kolarova; Martin Reck; Niels Reinmuth; Christian Kugler; Ines Schädlich; Andrea Haake; Peter Zabel; Ekkehard Vollmer; Reiner Siebert; Torsten Goldmann; Ole Ammerpohl
Journal:  Lab Invest       Date:  2014-06-16       Impact factor: 5.662

Review 10.  Biomarkers in retinoblastoma.

Authors:  Jie Sun; Hui-Yu Xi; Qing Shao; Qing-Huai Liu
Journal:  Int J Ophthalmol       Date:  2020-02-18       Impact factor: 1.779

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