Literature DB >> 23463312

DNA methylation dynamics in health and disease.

Yehudit Bergman1, Howard Cedar.   

Abstract

DNA methylation is an epigenetic mark that is erased in the early embryo and then re-established at the time of implantation. In this Review, dynamics of DNA methylation during normal development in vivo are discussed, starting from fertilization through embryogenesis and postnatal growth, as well as abnormal methylation changes that occur in cancer.

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Year:  2013        PMID： 23463312     DOI： 10.1038/nsmb.2518

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


  125 in total

1.  A unique developmental pattern of Oct-3/4 DNA methylation is controlled by a cis-demodification element.

Authors:  Sharon Gidekel; Yehudit Bergman
Journal:  J Biol Chem       Date:  2002-07-10       Impact factor: 5.157

2.  DNA-binding factors shape the mouse methylome at distal regulatory regions.

Authors:  Michael B Stadler; Rabih Murr; Lukas Burger; Robert Ivanek; Florian Lienert; Anne Schöler; Erik van Nimwegen; Christiane Wirbelauer; Edward J Oakeley; Dimos Gaidatzis; Vijay K Tiwari; Dirk Schübeler
Journal:  Nature       Date:  2011-12-14       Impact factor: 49.962

3.  Identification of genetic elements that autonomously determine DNA methylation states.

Authors:  Florian Lienert; Christiane Wirbelauer; Indrani Som; Ann Dean; Fabio Mohn; Dirk Schübeler
Journal:  Nat Genet       Date:  2011-10-02       Impact factor: 38.330

4.  Inhibition of DNA methyltransferase activity prevents tumorigenesis in a mouse model of prostate cancer.

Authors:  Michael T McCabe; Jonathan A Low; Stephanie Daignault; Michael J Imperiale; Kirk J Wojno; Mark L Day
Journal:  Cancer Res       Date:  2006-01-01       Impact factor: 12.701

5.  Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line.

Authors:  Einav Nili Gal-Yam; Gerda Egger; Leo Iniguez; Heather Holster; Steingrímur Einarsson; Xinmin Zhang; Joy C Lin; Gangning Liang; Peter A Jones; Amos Tanay
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-27       Impact factor: 11.205

6.  Opposing effects of DNA hypomethylation on intestinal and liver carcinogenesis.

Authors:  Yasuhiro Yamada; Laurie Jackson-Grusby; Heinz Linhart; Alex Meissner; Amir Eden; Haijiang Lin; Rudolf Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-08       Impact factor: 11.205

7.  A mammalian protein with specific demethylase activity for mCpG DNA.

Authors:  S K Bhattacharya; S Ramchandani; N Cervoni; M Szyf
Journal:  Nature       Date:  1999-02-18       Impact factor: 49.962

Review 8.  Cytidine deaminases: AIDing DNA demethylation?

Authors:  Eric L Fritz; F Nina Papavasiliou
Journal:  Genes Dev       Date:  2010-10-01       Impact factor: 11.361

9.  The interaction of the SRA domain of ICBP90 with a novel domain of DNMT1 is involved in the regulation of VEGF gene expression.

Authors:  M Achour; X Jacq; P Rondé; M Alhosin; C Charlot; T Chataigneau; M Jeanblanc; M Macaluso; A Giordano; A D Hughes; V B Schini-Kerth; C Bronner
Journal:  Oncogene       Date:  2007-10-15       Impact factor: 9.867

10.  The ontogeny of allele-specific methylation associated with imprinted genes in the mouse.

Authors:  M Brandeis; T Kafri; M Ariel; J R Chaillet; J McCarrey; A Razin; H Cedar
Journal:  EMBO J       Date:  1993-09       Impact factor: 11.598
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  228 in total

1.  Longitudinal personal DNA methylome dynamics in a human with a chronic condition.

Authors:  Rui Chen; Lin Xia; Kailing Tu; Meixue Duan; Kimberly Kukurba; Jennifer Li-Pook-Than; Dan Xie; Michael Snyder
Journal:  Nat Med       Date:  2018-11-05       Impact factor: 53.440

Review 2.  Epigenetic regulation of epithelial-mesenchymal transition.

Authors:  Lidong Sun; Jia Fang
Journal:  Cell Mol Life Sci       Date:  2016-07-08       Impact factor: 9.261

3.  Pyrene-based quantitative detection of the 5-formylcytosine loci symmetry in the CpG duplex content during TET-dependent demethylation.

Authors:  Liang Xu; Ying-Chu Chen; Jenny Chong; Andrea Fin; Lisa S McCoy; Jun Xu; Chao Zhang; Dong Wang
Journal:  Angew Chem Int Ed Engl       Date:  2014-08-27       Impact factor: 15.336

Review 4.  DNA methylation correlates of PTSD: Recent findings and technical challenges.

Authors:  Filomene G Morrison; Mark W Miller; Mark W Logue; Michele Assef; Erika J Wolf
Journal:  Prog Neuropsychopharmacol Biol Psychiatry       Date:  2018-11-30       Impact factor: 5.067

5.  The anti-tumor effects of Mfn2 in breast cancer are dependent on promoter DNA methylation, the P21Ras motif and PKA phosphorylation site.

Authors:  Yufeng Li; Wenyue Dong; Xijin Shan; Hui Hong; Yan Liu; Yankun Liu; Xiaohui Liu; Xiaojun Zhang; Jinghua Zhang
Journal:  Oncol Lett       Date:  2018-03-21       Impact factor: 2.967

6.  Epigenetic Compensation Promotes Liver Regeneration.

Authors:  Shuang Wang; Chi Zhang; Dan Hasson; Anal Desai; Sucharita SenBanerjee; Elena Magnani; Chinweike Ukomadu; Amaia Lujambio; Emily Bernstein; Kirsten C Sadler
Journal:  Dev Cell       Date:  2019-06-20       Impact factor: 12.270

7.  HPV16 CpG methyl-haplotypes are associated with cervix precancer and cancer in the Guanacaste natural history study.

Authors:  Marina Frimer; Chang Sun; Thomas McAndrew; Benjamin Smith; Ariana Harari; Zigui Chen; Lisa Mirabello; Nicolas Wentzensen; Gary L Goldberg; Ana C Rodriguez; Mark Schiffman; Robert D Burk
Journal:  Gynecol Oncol       Date:  2015-05-19       Impact factor: 5.482

8.  Structural impact of complete CpG methylation within target DNA on specific complex formation of the inducible transcription factor Egr-1.

Authors:  Levani Zandarashvili; Mark A White; Alexandre Esadze; Junji Iwahara
Journal:  FEBS Lett       Date:  2015-05-19       Impact factor: 4.124

Review 9.  Early-life Exposure to Endocrine Disrupting Chemicals and Later-life Health Outcomes: An Epigenetic Bridge?

Authors:  Alexander Vaiserman
Journal:  Aging Dis       Date:  2014-01-28       Impact factor: 6.745

10.  ENmix: a novel background correction method for Illumina HumanMethylation450 BeadChip.

Authors:  Zongli Xu; Liang Niu; Leping Li; Jack A Taylor
Journal:  Nucleic Acids Res       Date:  2015-09-17       Impact factor: 16.971
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