Literature DB >> 23459955

Supermodels: sorghum and maize provide mutual insight into the genetics of flowering time.

E S Mace1, C H Hunt, D R Jordan.   

Abstract

Nested association mapping (NAM) offers power to dissect complex, quantitative traits. This study made use of a recently developed sorghum backcross (BC)-NAM population to dissect the genetic architecture of flowering time in sorghum; to compare the QTL identified with other genomic regions identified in previous sorghum and maize flowering time studies and to highlight the implications of our findings for plant breeding. A subset of the sorghum BC-NAM population consisting of over 1,300 individuals from 24 families was evaluated for flowering time across multiple environments. Two QTL analysis methodologies were used to identify 40 QTLs with predominately small, additive effects on flowering time; 24 of these co-located with previously identified QTL for flowering time in sorghum and 16 were novel in sorghum. Significant synteny was also detected with the QTL for flowering time detected in a comparable NAM resource recently developed for maize (Zea mays) by Buckler et al. (Science 325:714-718, 2009). The use of the sorghum BC-NAM population allowed us to catalogue allelic variants at a maximal number of QTL and understand their contribution to the flowering time phenotype and distribution across diverse germplasm. The successful demonstration of the power of the sorghum BC-NAM population is exemplified not only by correspondence of QTL previously identified in sorghum, but also by correspondence of QTL in different taxa, specifically maize in this case. The unification across taxa of the candidate genes influencing complex traits, such as flowering time can further facilitate the detailed dissection of the genetic control and causal genes.

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Year:  2013        PMID: 23459955     DOI: 10.1007/s00122-013-2059-z

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  37 in total

Review 1.  Control of flowering time: interacting pathways as a basis for diversity.

Authors:  Aidyn Mouradov; Frédéric Cremer; George Coupland
Journal:  Plant Cell       Date:  2002       Impact factor: 11.277

Review 2.  Control of flowering time in temperate cereals: genes, domestication, and sustainable productivity.

Authors:  James Cockram; Huw Jones; Fiona J Leigh; Donal O'Sullivan; Wayne Powell; David A Laurie; Andrew J Greenland
Journal:  J Exp Bot       Date:  2007-04-09       Impact factor: 6.992

3.  Identification of quantitative trait loci for agronomically important traits and their association with genic-microsatellite markers in sorghum.

Authors:  G Srinivas; K Satish; R Madhusudhana; R Nagaraja Reddy; S Murali Mohan; N Seetharama
Journal:  Theor Appl Genet       Date:  2009-03-10       Impact factor: 5.699

4.  Integrating sorghum whole genome sequence information with a compendium of sorghum QTL studies reveals uneven distribution of QTL and of gene-rich regions with significant implications for crop improvement.

Authors:  E S Mace; D R Jordan
Journal:  Theor Appl Genet       Date:  2011-04-12       Impact factor: 5.699

5.  Mapping of post-flowering drought resistance traits in grain sorghum: association between QTLs influencing premature senescence and maturity.

Authors:  O R Crasta; W W Xu; D T Rosenow; J Mullet; H T Nguyen
Journal:  Mol Gen Genet       Date:  1999-10

6.  Genetic mapping of QTLs for sugar-related traits in a RIL population of Sorghum bicolor L. Moench.

Authors:  Amukelani Lacrecia Shiringani; Matthias Frisch; Wolfgang Friedt
Journal:  Theor Appl Genet       Date:  2010-03-14       Impact factor: 5.699

7.  Population genomics of the Arabidopsis thaliana flowering time gene network.

Authors:  Jonathan M Flowers; Yoshie Hanzawa; Megan C Hall; Richard C Moore; Michael D Purugganan
Journal:  Mol Biol Evol       Date:  2009-07-22       Impact factor: 16.240

8.  Alignment of genetic maps and QTLs between inter- and intra-specific sorghum populations.

Authors:  F A Feltus; G E Hart; K F Schertz; A M Casa; S Kresovich; S Abraham; P E Klein; P J Brown; A H Paterson
Journal:  Theor Appl Genet       Date:  2006-02-21       Impact factor: 5.699

Review 9.  Climate change and the flowering time of annual crops.

Authors:  P Q Craufurd; T R Wheeler
Journal:  J Exp Bot       Date:  2009       Impact factor: 6.992

Review 10.  The molecular biology of seasonal flowering-responses in Arabidopsis and the cereals.

Authors:  Aaron Greenup; W James Peacock; Elizabeth S Dennis; Ben Trevaskis
Journal:  Ann Bot       Date:  2009-03-21       Impact factor: 4.357

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  22 in total

Review 1.  MAGIC populations in crops: current status and future prospects.

Authors:  B Emma Huang; Klara L Verbyla; Arunas P Verbyla; Chitra Raghavan; Vikas K Singh; Pooran Gaur; Hei Leung; Rajeev K Varshney; Colin R Cavanagh
Journal:  Theor Appl Genet       Date:  2015-04-09       Impact factor: 5.699

2.  A first step toward the development of a barley NAM population and its utilization to detect QTLs conferring leaf rust seedling resistance.

Authors:  Florian Schnaithmann; Doris Kopahnke; Klaus Pillen
Journal:  Theor Appl Genet       Date:  2014-05-06       Impact factor: 5.699

3.  Genome-wide association studies identify putative pleiotropic locus mediating drought tolerance in sorghum.

Authors:  Fanna Maina; Abdou Harou; Falalou Hamidou; Geoffrey P Morris
Journal:  Plant Direct       Date:  2022-06-16

4.  Development of an Australian Bread Wheat Nested Association Mapping Population, a New Genetic Diversity Resource for Breeding under Dry and Hot Climates.

Authors:  Charity Chidzanga; Delphine Fleury; Ute Baumann; Dan Mullan; Sayuri Watanabe; Priyanka Kalambettu; Robert Pontre; James Edwards; Kerrie Forrest; Debbie Wong; Peter Langridge; Ken Chalmers; Melissa Garcia
Journal:  Int J Mol Sci       Date:  2021-04-21       Impact factor: 5.923

5.  Joint analysis of days to flowering reveals independent temperate adaptations in maize.

Authors:  Kelly Swarts; Eva Bauer; Jeffrey C Glaubitz; Tiffany Ho; Lynn Johnson; Yongxiang Li; Yu Li; Zachary Miller; Cinta Romay; Chris-Carolin Schön; Tianyu Wang; Zhiwu Zhang; Edward S Buckler; Peter Bradbury
Journal:  Heredity (Edinb)       Date:  2021-04-22       Impact factor: 3.832

6.  Modelling the genetic architecture of flowering time control in barley through nested association mapping.

Authors:  Andreas Maurer; Vera Draba; Yong Jiang; Florian Schnaithmann; Rajiv Sharma; Erika Schumann; Benjamin Kilian; Jochen Christoph Reif; Klaus Pillen
Journal:  BMC Genomics       Date:  2015-04-12       Impact factor: 3.969

7.  Genetic architecture of variation in heading date among Asian rice accessions.

Authors:  Kiyosumi Hori; Yasunori Nonoue; Nozomi Ono; Taeko Shibaya; Kaworu Ebana; Kazuki Matsubara; Eri Ogiso-Tanaka; Takanari Tanabata; Kazuhiko Sugimoto; Fumio Taguchi-Shiobara; Jun-ichi Yonemaru; Ritsuko Mizobuchi; Yusaku Uga; Atsunori Fukuda; Tadamasa Ueda; Shin-ichi Yamamoto; Utako Yamanouchi; Toshiyuki Takai; Takashi Ikka; Katsuhiko Kondo; Tomoki Hoshino; Eiji Yamamoto; Shunsuke Adachi; Hideki Nagasaki; Ayahiko Shomura; Takehiko Shimizu; Izumi Kono; Sachie Ito; Tatsumi Mizubayashi; Noriyuki Kitazawa; Kazufumi Nagata; Tsuyu Ando; Shuichi Fukuoka; Toshio Yamamoto; Masahiro Yano
Journal:  BMC Plant Biol       Date:  2015-05-08       Impact factor: 4.215

8.  Association mapping and genomic selection for sorghum adaptation to tropical soils of Brazil in a sorghum multiparental random mating population.

Authors:  Karine C Bernardino; Cícero B de Menezes; Sylvia M de Sousa; Claudia T Guimarães; Pedro C S Carneiro; Robert E Schaffert; Leon V Kochian; Barbara Hufnagel; Maria Marta Pastina; Jurandir V Magalhaes
Journal:  Theor Appl Genet       Date:  2020-10-14       Impact factor: 5.699

9.  Genetic mapping of quantitative trait loci underlying flowering time in chrysanthemum (Chrysanthemum morifolium).

Authors:  Fei Zhang; Sumei Chen; Jiafu Jiang; Zhiyong Guan; Weimin Fang; Fadi Chen
Journal:  PLoS One       Date:  2013-12-11       Impact factor: 3.240

10.  CONSTANS is a photoperiod regulated activator of flowering in sorghum.

Authors:  Shanshan Yang; Brock D Weers; Daryl T Morishige; John E Mullet
Journal:  BMC Plant Biol       Date:  2014-05-28       Impact factor: 4.215

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