Literature DB >> 23456168

Genome-wide association study in Han Chinese identifies three novel loci for human height.

Yongchen Hao1, Xuehui Liu, Xiangfeng Lu, Xueli Yang, Laiyuan Wang, Shufeng Chen, Hongfan Li, Jianxin Li, Jie Cao, Jichun Chen, Ying Li, Liancheng Zhao, Yongyong Shi, Chong Shen, Weili Yan, Jiang He, Jianfeng Huang, Dongfeng Gu.   

Abstract

Human height is a complex genetic trait with high heritability but discovery efforts in Asian populations are limited. We carried out a meta-analysis of genome-wide association studies (GWAS) for height in 6,534 subjects with in silico replication of 1,881 subjects in Han Chinese. We identified three novel loci reaching the genome-wide significance threshold (P < 5 × 10(-8)), which mapped in or near ZNF638 (rs12612930, P = 2.02 × 10(-10)), MAML2 (rs11021504, P = 7.81 × 10(-9)), and C18orf12 (rs11082671, P = 1.87 × 10(-8)). We also confirmed two loci previously reported in European populations including CS (rs3816804, P = 2.63 × 10(-9)) and CYP19A1 (rs3751599, P = 4.80 × 10(-10)). In addition, we provided evidence supporting 35 SNPs identified by previous GWAS (P < 0.05). Our study provides new insights into the genetic determination of biological regulation of human height.

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Year:  2013        PMID: 23456168     DOI: 10.1007/s00439-013-1280-9

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  41 in total

1.  Genomic control for association studies.

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Journal:  Biometrics       Date:  1999-12       Impact factor: 2.571

2.  Genetic variants that affect length/height in infancy/early childhood in Vietnamese-Korean families.

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Journal:  J Hum Genet       Date:  2010-07-29       Impact factor: 3.172

3.  Principal components analysis corrects for stratification in genome-wide association studies.

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Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

4.  Notch signaling maintains bone marrow mesenchymal progenitors by suppressing osteoblast differentiation.

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Journal:  Nat Med       Date:  2008-02-24       Impact factor: 53.440

5.  A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.

Authors:  Yukinori Okada; Yoichiro Kamatani; Atsushi Takahashi; Koichi Matsuda; Naoya Hosono; Hiroko Ohmiya; Yataro Daigo; Kazuhiko Yamamoto; Michiaki Kubo; Yusuke Nakamura; Naoyuki Kamatani
Journal:  Hum Mol Genet       Date:  2010-02-26       Impact factor: 6.150

6.  Genome-wide association study of height and body mass index in Australian twin families.

Authors:  Jimmy Z Liu; Sarah E Medland; Margaret J Wright; Anjali K Henders; Andrew C Heath; Pamela A F Madden; Alexis Duncan; Grant W Montgomery; Nicholas G Martin; Allan F McRae
Journal:  Twin Res Hum Genet       Date:  2010-04       Impact factor: 1.587

7.  Genome partitioning of genetic variation for complex traits using common SNPs.

Authors:  Jian Yang; Teri A Manolio; Louis R Pasquale; Eric Boerwinkle; Neil Caporaso; Julie M Cunningham; Mariza de Andrade; Bjarke Feenstra; Eleanor Feingold; M Geoffrey Hayes; William G Hill; Maria Teresa Landi; Alvaro Alonso; Guillaume Lettre; Peng Lin; Hua Ling; William Lowe; Rasika A Mathias; Mads Melbye; Elizabeth Pugh; Marilyn C Cornelis; Bruce S Weir; Michael E Goddard; Peter M Visscher
Journal:  Nat Genet       Date:  2011-05-08       Impact factor: 38.330

8.  Genome-wide association study in Han Chinese identifies four new susceptibility loci for coronary artery disease.

Authors:  Xiangfeng Lu; Laiyuan Wang; Shufeng Chen; Lin He; Xueli Yang; Yongyong Shi; Jing Cheng; Liang Zhang; C Charles Gu; Jianfeng Huang; Tangchun Wu; Yitong Ma; Jianxin Li; Jie Cao; Jichun Chen; Dongliang Ge; Zhongjie Fan; Ying Li; Liancheng Zhao; Hongfan Li; Xiaoyang Zhou; Lanying Chen; Donghua Liu; Jingping Chen; Xiufang Duan; Yongchen Hao; Ligui Wang; Fanghong Lu; Zhendong Liu; Cailiang Yao; Chong Shen; Xiaodong Pu; Lin Yu; Xianghua Fang; Lihua Xu; Jianjun Mu; Xianping Wu; Runping Zheng; Naqiong Wu; Qi Zhao; Yun Li; Xiaoli Liu; Mengqin Wang; Dahai Yu; Dongsheng Hu; Xu Ji; Dongshuang Guo; Dongling Sun; Qianqian Wang; Ying Yang; Fangchao Liu; Qunxia Mao; Xiaohua Liang; Jingfeng Ji; Panpan Chen; Xingbo Mo; Dianjiang Li; Guoping Chai; Yida Tang; Xiangdong Li; Zhenhan Du; Xuehui Liu; Chenlong Dou; Zili Yang; Qingjie Meng; Dong Wang; Renping Wang; Jun Yang; Heribert Schunkert; Nilesh J Samani; Sekar Kathiresan; Muredach P Reilly; Jeanette Erdmann; Xiaozhong Peng; Xigui Wu; Depei Liu; Yuejin Yang; Runsheng Chen; Boqin Qiang; Dongfeng Gu
Journal:  Nat Genet       Date:  2012-07-01       Impact factor: 38.330

9.  Common variants in the GDF5-UQCC region are associated with variation in human height.

Authors:  Serena Sanna; Anne U Jackson; Ramaiah Nagaraja; Cristen J Willer; Wei-Min Chen; Lori L Bonnycastle; Haiqing Shen; Nicholas Timpson; Guillaume Lettre; Gianluca Usala; Peter S Chines; Heather M Stringham; Laura J Scott; Mariano Dei; Sandra Lai; Giuseppe Albai; Laura Crisponi; Silvia Naitza; Kimberly F Doheny; Elizabeth W Pugh; Yoav Ben-Shlomo; Shah Ebrahim; Debbie A Lawlor; Richard N Bergman; Richard M Watanabe; Manuela Uda; Jaakko Tuomilehto; Josef Coresh; Joel N Hirschhorn; Alan R Shuldiner; David Schlessinger; Francis S Collins; George Davey Smith; Eric Boerwinkle; Antonio Cao; Michael Boehnke; Gonçalo R Abecasis; Karen L Mohlke
Journal:  Nat Genet       Date:  2008-01-13       Impact factor: 38.330

Review 10.  TGF-β and BMP signaling in osteoblast differentiation and bone formation.

Authors:  Guiqian Chen; Chuxia Deng; Yi-Ping Li
Journal:  Int J Biol Sci       Date:  2012-01-21       Impact factor: 6.580

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  11 in total

1.  Whole-exome imputation of sequence variants identified two novel alleles associated with adult body height in African Americans.

Authors:  Mengmeng Du; Paul L Auer; Shuo Jiao; Jeffrey Haessler; David Altshuler; Eric Boerwinkle; Christopher S Carlson; Cara L Carty; Yii-Der Ida Chen; Keith Curtis; Nora Franceschini; Li Hsu; Rebecca Jackson; Leslie A Lange; Guillaume Lettre; Keri L Monda; Deborah A Nickerson; Alex P Reiner; Stephen S Rich; Stephanie A Rosse; Jerome I Rotter; Cristen J Willer; James G Wilson; Kari North; Charles Kooperberg; Nancy Heard-Costa; Ulrike Peters
Journal:  Hum Mol Genet       Date:  2014-07-15       Impact factor: 6.150

2.  Association of polymorphism in the VEGFA gene 3'-UTR +936T/C with susceptibility to biliary atresia in a Southern Chinese Han population.

Authors:  Fei Liu; Jixiao Zeng; Deli Zhu; Ruizhong Zhang; Xiaogang Xu; Mengmeng Wang; Yan Zhang; Huimin Xia; Zhichun Feng
Journal:  J Clin Lab Anal       Date:  2017-12-18       Impact factor: 2.352

3.  Your height affects your health: genetic determinants and health-related outcomes in Taiwan.

Authors:  Jian-Shiun Chiou; Chi-Fung Cheng; Wen-Miin Liang; Chen-Hsing Chou; Chung-Hsing Wang; Wei-De Lin; Mu-Lin Chiu; Wei-Chung Cheng; Cheng-Wen Lin; Ting-Hsu Lin; Chiu-Chu Liao; Shao-Mei Huang; Chang-Hai Tsai; Ying-Ju Lin; Fuu-Jen Tsai
Journal:  BMC Med       Date:  2022-07-13       Impact factor: 11.150

4.  The CODATwins Project: The Cohort Description of Collaborative Project of Development of Anthropometrical Measures in Twins to Study Macro-Environmental Variation in Genetic and Environmental Effects on Anthropometric Traits.

Authors:  Karri Silventoinen; Aline Jelenkovic; Reijo Sund; Chika Honda; Sari Aaltonen; Yoshie Yokoyama; Adam D Tarnoki; David L Tarnoki; Feng Ning; Fuling Ji; Zengchang Pang; Juan R Ordoñana; Juan F Sánchez-Romera; Lucia Colodro-Conde; S Alexandra Burt; Kelly L Klump; Sarah E Medland; Grant W Montgomery; Christian Kandler; Tom A McAdams; Thalia C Eley; Alice M Gregory; Kimberly J Saudino; Lise Dubois; Michel Boivin; Claire M A Haworth; Robert Plomin; Sevgi Y Öncel; Fazil Aliev; Maria A Stazi; Corrado Fagnani; Cristina D'Ippolito; Jeffrey M Craig; Richard Saffery; Sisira H Siribaddana; Matthew Hotopf; Athula Sumathipala; Timothy Spector; Massimo Mangino; Genevieve Lachance; Margaret Gatz; David A Butler; Gombojav Bayasgalan; Danshiitsoodol Narandalai; Duarte L Freitas; José Antonio Maia; K Paige Harden; Elliot M Tucker-Drob; Kaare Christensen; Axel Skytthe; Kirsten O Kyvik; Changhee Hong; Youngsook Chong; Catherine A Derom; Robert F Vlietinck; Ruth J F Loos; Wendy Cozen; Amie E Hwang; Thomas M Mack; Mingguang He; Xiaohu Ding; Billy Chang; Judy L Silberg; Lindon J Eaves; Hermine H Maes; Tessa L Cutler; John L Hopper; Kelly Aujard; Patrik K E Magnusson; Nancy L Pedersen; Anna K Dahl Aslan; Yun-Mi Song; Sarah Yang; Kayoung Lee; Laura A Baker; Catherine Tuvblad; Morten Bjerregaard-Andersen; Henning Beck-Nielsen; Morten Sodemann; Kauko Heikkilä; Qihua Tan; Dongfeng Zhang; Gary E Swan; Ruth Krasnow; Kerry L Jang; Ariel Knafo-Noam; David Mankuta; Lior Abramson; Paul Lichtenstein; Robert F Krueger; Matt McGue; Shandell Pahlen; Per Tynelius; Glen E Duncan; Dedra Buchwald; Robin P Corley; Brooke M Huibregtse; Tracy L Nelson; Keith E Whitfield; Carol E Franz; William S Kremen; Michael J Lyons; Syuichi Ooki; Ingunn Brandt; Thomas Sevenius Nilsen; Fujio Inui; Mikio Watanabe; Meike Bartels; Toos C E M van Beijsterveldt; Jane Wardle; Clare H Llewellyn; Abigail Fisher; Esther Rebato; Nicholas G Martin; Yoshinori Iwatani; Kazuo Hayakawa; Finn Rasmussen; Joohon Sung; Jennifer R Harris; Gonneke Willemsen; Andreas Busjahn; Jack H Goldberg; Dorret I Boomsma; Yoon-Mi Hur; Thorkild I A Sørensen; Jaakko Kaprio
Journal:  Twin Res Hum Genet       Date:  2015-05-27       Impact factor: 1.587

5.  Susceptibility loci revealed for bovine respiratory disease complex in pre-weaned holstein calves.

Authors:  Holly L Neibergs; Christopher M Seabury; Andrzej J Wojtowicz; Zeping Wang; Erik Scraggs; Jennifer N Kiser; Mahesh Neupane; James E Womack; Alison Van Eenennaam; Gerald Robert Hagevoort; Terry W Lehenbauer; Sharif Aly; Jessica Davis; Jeremy F Taylor
Journal:  BMC Genomics       Date:  2014-12-22       Impact factor: 3.969

6.  Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan.

Authors:  Ying-Ju Lin; Wen-Ling Liao; Chung-Hsing Wang; Li-Ping Tsai; Chih-Hsin Tang; Chien-Hsiun Chen; Jer-Yuarn Wu; Wen-Miin Liang; Ai-Ru Hsieh; Chi-Fung Cheng; Jin-Hua Chen; Wen-Kuei Chien; Ting-Hsu Lin; Chia-Ming Wu; Chiu-Chu Liao; Shao-Mei Huang; Fuu-Jen Tsai
Journal:  Sci Rep       Date:  2017-07-25       Impact factor: 4.379

7.  Genetically determined height was associated with lung cancer risk in East Asian population.

Authors:  Lu Wang; Mingtao Huang; Hui Ding; Guangfu Jin; Liang Chen; Feng Chen; Hongbing Shen
Journal:  Cancer Med       Date:  2018-05-23       Impact factor: 4.452

8.  EBF1 gene polymorphism and its interaction with smoking and drinking on the risk of coronary artery disease for Chinese patients.

Authors:  Yongjun Ying; Yuxuan Luo; Hui Peng
Journal:  Biosci Rep       Date:  2018-06-21       Impact factor: 3.840

9.  Genetic and environmental influences on height from infancy to early adulthood: An individual-based pooled analysis of 45 twin cohorts.

Authors:  Aline Jelenkovic; Reijo Sund; Yoon-Mi Hur; Yoshie Yokoyama; Jacob V B Hjelmborg; Sören Möller; Chika Honda; Patrik K E Magnusson; Nancy L Pedersen; Syuichi Ooki; Sari Aaltonen; Maria A Stazi; Corrado Fagnani; Cristina D'Ippolito; Duarte L Freitas; José Antonio Maia; Fuling Ji; Feng Ning; Zengchang Pang; Esther Rebato; Andreas Busjahn; Christian Kandler; Kimberly J Saudino; Kerry L Jang; Wendy Cozen; Amie E Hwang; Thomas M Mack; Wenjing Gao; Canqing Yu; Liming Li; Robin P Corley; Brooke M Huibregtse; Catherine A Derom; Robert F Vlietinck; Ruth J F Loos; Kauko Heikkilä; Jane Wardle; Clare H Llewellyn; Abigail Fisher; Tom A McAdams; Thalia C Eley; Alice M Gregory; Mingguang He; Xiaohu Ding; Morten Bjerregaard-Andersen; Henning Beck-Nielsen; Morten Sodemann; Adam D Tarnoki; David L Tarnoki; Ariel Knafo-Noam; David Mankuta; Lior Abramson; S Alexandra Burt; Kelly L Klump; Judy L Silberg; Lindon J Eaves; Hermine H Maes; Robert F Krueger; Matt McGue; Shandell Pahlen; Margaret Gatz; David A Butler; Meike Bartels; Toos C E M van Beijsterveldt; Jeffrey M Craig; Richard Saffery; Lise Dubois; Michel Boivin; Mara Brendgen; Ginette Dionne; Frank Vitaro; Nicholas G Martin; Sarah E Medland; Grant W Montgomery; Gary E Swan; Ruth Krasnow; Per Tynelius; Paul Lichtenstein; Claire M A Haworth; Robert Plomin; Gombojav Bayasgalan; Danshiitsoodol Narandalai; K Paige Harden; Elliot M Tucker-Drob; Timothy Spector; Massimo Mangino; Genevieve Lachance; Laura A Baker; Catherine Tuvblad; Glen E Duncan; Dedra Buchwald; Gonneke Willemsen; Axel Skytthe; Kirsten O Kyvik; Kaare Christensen; Sevgi Y Öncel; Fazil Aliev; Finn Rasmussen; Jack H Goldberg; Thorkild I A Sørensen; Dorret I Boomsma; Jaakko Kaprio; Karri Silventoinen
Journal:  Sci Rep       Date:  2016-06-23       Impact factor: 4.379

10.  Genetic and environmental influences on adult human height across birth cohorts from 1886 to 1994.

Authors:  Aline Jelenkovic; Yoon-Mi Hur; Reijo Sund; Yoshie Yokoyama; Sisira H Siribaddana; Matthew Hotopf; Athula Sumathipala; Fruhling Rijsdijk; Qihua Tan; Dongfeng Zhang; Zengchang Pang; Sari Aaltonen; Kauko Heikkilä; Sevgi Y Öncel; Fazil Aliev; Esther Rebato; Adam D Tarnoki; David L Tarnoki; Kaare Christensen; Axel Skytthe; Kirsten O Kyvik; Judy L Silberg; Lindon J Eaves; Hermine H Maes; Tessa L Cutler; John L Hopper; Juan R Ordoñana; Juan F Sánchez-Romera; Lucia Colodro-Conde; Wendy Cozen; Amie E Hwang; Thomas M Mack; Joohon Sung; Yun-Mi Song; Sarah Yang; Kayoung Lee; Carol E Franz; William S Kremen; Michael J Lyons; Andreas Busjahn; Tracy L Nelson; Keith E Whitfield; Christian Kandler; Kerry L Jang; Margaret Gatz; David A Butler; Maria A Stazi; Corrado Fagnani; Cristina D'Ippolito; Glen E Duncan; Dedra Buchwald; Catherine A Derom; Robert F Vlietinck; Ruth Jf Loos; Nicholas G Martin; Sarah E Medland; Grant W Montgomery; Hoe-Uk Jeong; Gary E Swan; Ruth Krasnow; Patrik Ke Magnusson; Nancy L Pedersen; Anna K Dahl-Aslan; Tom A McAdams; Thalia C Eley; Alice M Gregory; Per Tynelius; Laura A Baker; Catherine Tuvblad; Gombojav Bayasgalan; Danshiitsoodol Narandalai; Paul Lichtenstein; Timothy D Spector; Massimo Mangino; Genevieve Lachance; Meike Bartels; Toos Cem van Beijsterveldt; Gonneke Willemsen; S Alexandra Burt; Kelly L Klump; Jennifer R Harris; Ingunn Brandt; Thomas Sevenius Nilsen; Robert F Krueger; Matt McGue; Shandell Pahlen; Robin P Corley; Jacob V B Hjelmborg; Jack H Goldberg; Yoshinori Iwatani; Mikio Watanabe; Chika Honda; Fujio Inui; Finn Rasmussen; Brooke M Huibregtse; Dorret I Boomsma; Thorkild I A Sørensen; Jaakko Kaprio; Karri Silventoinen
Journal:  Elife       Date:  2016-12-14       Impact factor: 8.140

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