Literature DB >> 23454554

Functions of the DExD/H-box proteins in nuclear pre-mRNA splicing.

Tien-Hsien Chang1, Luh Tung, Fu-Lung Yeh, Jui-Hui Chen, Shang-Lin Chang.   

Abstract

In eukaryotes, many genes are transcribed as precursor messenger RNAs (pre-mRNAs) that contain exons and introns, the latter of which must be removed and exons ligated to form the mature mRNAs. This process is called pre-mRNA splicing, which occurs in the nucleus. Although the chemistry of pre-mRNA splicing is identical to that of the self-splicing Group II introns, hundreds of proteins and five small nuclear RNAs (snRNAs), U1, U2, U4, U5, and U6, are essential for executing pre-mRNA splicing. Spliceosome, arguably the most complex cellular machine made up of all those proteins and snRNAs, is responsible for carrying out pre-mRNA splicing. In contrast to the transcription and the translation machineries, spliceosome is formed anew onto each pre-mRNA and undergoes a series of highly coordinated reconfigurations to form the catalytic center. This amazing process is orchestrated by a number of DExD/H-proteins that are the focus of this article, which aims to review the field in general and to project the exciting challenges and opportunities ahead. This article is part of a Special Issue entitled: The Biology of RNA helicases - Modulation for life.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23454554     DOI: 10.1016/j.bbagrm.2013.02.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  14 in total

1.  Intracellular Bacterial Pathogens Trigger the Formation of U Small Nuclear RNA Bodies (U Bodies) through Metabolic Stress Induction.

Authors:  Jessica Tsalikis; Ivan Tattoli; Arthur Ling; Matthew T Sorbara; David O Croitoru; Dana J Philpott; Stephen E Girardin
Journal:  J Biol Chem       Date:  2015-07-01       Impact factor: 5.157

2.  An Allosteric Network for Spliceosome Activation Revealed by High-Throughput Suppressor Analysis in Saccharomyces cerevisiae.

Authors:  David A Brow
Journal:  Genetics       Date:  2019-03-21       Impact factor: 4.562

Review 3.  RNA helicase proteins as chaperones and remodelers.

Authors:  Inga Jarmoskaite; Rick Russell
Journal:  Annu Rev Biochem       Date:  2014-03-12       Impact factor: 23.643

Review 4.  The multiple functions of RNA helicases as drivers and regulators of gene expression.

Authors:  Cyril F Bourgeois; Franck Mortreux; Didier Auboeuf
Journal:  Nat Rev Mol Cell Biol       Date:  2016-06-02       Impact factor: 94.444

5.  Using yeast genetics to study splicing mechanisms.

Authors:  Munshi Azad Hossain; Tracy L Johnson
Journal:  Methods Mol Biol       Date:  2014

6.  The eIF4AIII RNA helicase is a critical determinant of human cytomegalovirus replication.

Authors:  Ben Ziehr; Erik Lenarcic; Chad Cecil; Nathaniel J Moorman
Journal:  Virology       Date:  2016-01-08       Impact factor: 3.616

7.  The conserved AU dinucleotide at the 5' end of nascent U1 snRNA is optimized for the interaction with nuclear cap-binding-complex.

Authors:  Chung-Shu Yeh; Shang-Lin Chang; Jui-Hui Chen; Hsuan-Kai Wang; Yue-Chang Chou; Chun-Hsiung Wang; Shih-Hsin Huang; Amy Larson; Jeffrey A Pleiss; Wei-Hau Chang; Tien-Hsien Chang
Journal:  Nucleic Acids Res       Date:  2017-09-19       Impact factor: 16.971

8.  Slow molecular recognition by RNA.

Authors:  Kristin R Gleitsman; Raghuvir N Sengupta; Daniel Herschlag
Journal:  RNA       Date:  2017-09-28       Impact factor: 4.942

9.  Cus2 enforces the first ATP-dependent step of splicing by binding to yeast SF3b1 through a UHM-ULM interaction.

Authors:  Jason Talkish; Haller Igel; Oarteze Hunter; Steven W Horner; Nazish N Jeffery; Justin R Leach; Jermaine L Jenkins; Clara L Kielkopf; Manuel Ares
Journal:  RNA       Date:  2019-05-20       Impact factor: 4.942

Review 10.  DEAD/DExH-Box RNA Helicases in Selected Human Parasites.

Authors:  Laurence A Marchat; Silvia I Arzola-Rodríguez; Olga Hernandez-de la Cruz; Itzel Lopez-Rosas; Cesar Lopez-Camarillo
Journal:  Korean J Parasitol       Date:  2015-10-29       Impact factor: 1.341

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