Literature DB >> 23452047

Enzymatic rate enhancements: a review and perspective.

John P Richard1.   

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Year:  2013        PMID： 23452047      PMCID： PMC3710718          DOI： 10.1021/bi3017119

Source DB:  PubMed          Journal:  Biochemistry        ISSN： 0006-2960            Impact factor:   3.162


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  12 in total

Review 1.  Formation and stability of carbocations and carbanions in water and intrinsic barriers to their reactions.

Authors:  J P Richard; T L Amyes; M M Toteva
Journal:  Acc Chem Res       Date:  2001-12       Impact factor: 22.384

Review 2.  Binding energy, specificity, and enzymic catalysis: the circe effect.

Authors:  W P Jencks
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1975

3.  The original Michaelis constant: translation of the 1913 Michaelis-Menten paper.

Authors:  Leonor Michaelis; Maud Leonora Menten; Kenneth A Johnson; Roger S Goody
Journal:  Biochemistry       Date:  2011-09-09       Impact factor: 3.162

Review 4.  Catalytic contributions from remote regions of enzyme structure.

Authors:  Jeeyeon Lee; Nina M Goodey
Journal:  Chem Rev       Date:  2011-09-19       Impact factor: 60.622

5.  Connecting protein conformational dynamics with catalytic function as illustrated in dihydrofolate reductase.

Authors:  Yao Fan; Alessandro Cembran; Shuhua Ma; Jiali Gao
Journal:  Biochemistry       Date:  2013-01-16       Impact factor: 3.162

Review 6.  Specificity in transition state binding: the Pauling model revisited.

Authors:  Tina L Amyes; John P Richard
Journal:  Biochemistry       Date:  2013-02-04       Impact factor: 3.162

7.  Role of binding energy with coenzyme A in catalysis by 3-oxoacid coenzyme A transferase.

Authors:  A Whitty; C A Fierke; W P Jencks
Journal:  Biochemistry       Date:  1995-09-19       Impact factor: 3.162

Review 8.  Catalytic efficiency of enzymes: a theoretical analysis.

Authors:  Sharon Hammes-Schiffer
Journal:  Biochemistry       Date:  2012-12-20       Impact factor: 3.162

Review 9.  Fundamental challenges in mechanistic enzymology: progress toward understanding the rate enhancements of enzymes.

Authors:  Daniel Herschlag; Aditya Natarajan
Journal:  Biochemistry       Date:  2013-03-14       Impact factor: 3.162

Review 10.  Importance of protein dynamics during enzymatic C-H bond cleavage catalysis.

Authors:  Judith P Klinman
Journal:  Biochemistry       Date:  2013-02-12       Impact factor: 3.162
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  11 in total

1.  A Biophysical Perspective on Enzyme Catalysis.

Authors:  Pratul K Agarwal
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

Review 2.  Enabling Role of Ligand-Driven Conformational Changes in Enzyme Evolution.

Authors:  John P Richard
Journal:  Biochemistry       Date:  2022-07-13       Impact factor: 3.321

3.  Resolution and characterization of contributions of select protein and coupled solvent configurational fluctuations to radical rearrangement catalysis in coenzyme B12-dependent ethanolamine ammonia-lyase.

Authors:  Meghan Kohne; Wei Li; Alina Ionescu; Chen Zhu; Kurt Warncke
Journal:  Methods Enzymol       Date:  2022-01-29       Impact factor: 1.682

4.  Glycerol-3-Phosphate Dehydrogenase: The K120 and K204 Side Chains Define an Oxyanion Hole at the Enzyme Active Site.

Authors:  Judith R Cristobal; John P Richard
Journal:  Biochemistry       Date:  2022-05-03       Impact factor: 3.321

5.  Reflections on the catalytic power of a TIM-barrel.

Authors:  John P Richard; Xiang Zhai; M Merced Malabanan
Journal:  Bioorg Chem       Date:  2014-07-11       Impact factor: 5.275

6.  Structural basis for the recognition of mycolic acid precursors by KasA, a condensing enzyme and drug target from Mycobacterium tuberculosis.

Authors:  Johannes Schiebel; Kanishk Kapilashrami; Agnes Fekete; Gopal R Bommineni; Christin M Schaefer; Martin J Mueller; Peter J Tonge; Caroline Kisker
Journal:  J Biol Chem       Date:  2013-10-09       Impact factor: 5.157

7.  Mechanistic Imperatives for Deprotonation of Carbon Catalyzed by Triosephosphate Isomerase: Enzyme-Activation by Phosphite Dianion.

Authors:  Xiang Zhai; M Merced Malabanan; Tina L Amyes; John P Richard
Journal:  J Phys Org Chem       Date:  2014-04-01       Impact factor: 2.391

8.  The activating oxydianion binding domain for enzyme-catalyzed proton transfer, hydride transfer, and decarboxylation: specificity and enzyme architecture.

Authors:  Archie C Reyes; Xiang Zhai; Kelsey T Morgan; Christopher J Reinhardt; Tina L Amyes; John P Richard
Journal:  J Am Chem Soc       Date:  2015-01-20       Impact factor: 15.419

9.  Primary Deuterium Kinetic Isotope Effects: A Probe for the Origin of the Rate Acceleration for Hydride Transfer Catalyzed by Glycerol-3-Phosphate Dehydrogenase.

Authors:  Archie C Reyes; Tina L Amyes; John P Richard
Journal:  Biochemistry       Date:  2018-07-10       Impact factor: 3.162

10.  Protein Flexibility and Stiffness Enable Efficient Enzymatic Catalysis.

Authors:  John P Richard
Journal:  J Am Chem Soc       Date:  2019-02-14       Impact factor: 15.419
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