| Literature DB >> 23437223 |
Sheng-xin Huang1, Fei-xiang Wu, Min Luo, Liang Ma, Ke-feng Gao, Jian Li, Wen-juan Wu, Shan Huang, Qi Yang, Ke Liu, Yin-nong Zhao, Le-qun Li.
Abstract
BACKGROUND: GSTP1, which is one major group of the glutathione S-transferase family, plays an important role in the metabolism of carcinogens and toxins, reducing damage of DNA as a suppressor of carcinogenesis. The 341C>T polymorphism of the GSTP1 has been implicated in cancer risk through cutting down its metabolic detoxification activities. However, results from previous studies remain conflicting rather than conclusive. To clarify the correlation and provide more statistical evidence for detecting the significance of 341C>T, a meta-analysis was conducted. METHODOLOGY/PRINCIPALEntities:
Mesh:
Substances:
Year: 2013 PMID: 23437223 PMCID: PMC3578943 DOI: 10.1371/journal.pone.0056722
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Scale for quality assessment.
| Parameter | Score |
|
| |
| Selected from population or cancer registry | 2 |
| Selected from oncology department or cancer institute | 1 |
| No description | 0 |
|
| |
| Population-based | 2 |
| Population-hospital mixed | 1.5 |
| Hospital-based | 1 |
| No description | 0 |
|
| |
| Histological or pathologically confirmed | 2 |
| Patient medical record | 1 |
| No description | 0 |
|
| |
| Peripheral blood or normal tissues | 2 |
| Tumor tissues or exfoliated cells | 1 |
| No description | 0 |
|
| |
| Different genotyping assays confirmed the result | 2 |
| Quality control by repeated assay | 1 |
| No description | 0 |
|
| |
| >1000 | 2 |
| 200–1000 | 1 |
| <200 | 0 |
Figure 1Studies identified with criteria for inclusion and exclusion.
Characteristics of studies included in the meta-analysis.
| Author | Publication year | Country | Ethnicity | Cancer type | Control source | Genotyping methods | Matching criteria | n(case) | n(control) | MAF | Power(%) | Quality score | ||
| 1.2 | 1.5 | 2 | ||||||||||||
| Al-Dayel | 2008 | Saudi Arabia | Asian | Lymphoma | PB | PCR-RFLP | Age, sex | 145 | 510 | 0.126 | 11.4 | 36.9 | 80.5 | 5 |
| Landi | 2005 | Spain | Caucasian | Coleractal | HB | APEX | NA | 360 | 325 | 0.055 | 8.6 | 25.6 | 65.8 | 5 |
| Barnette | 2004 | USA | Caucasian | Leukaemia | HB | AS-PCR | NA | 170 | 288 | 0.075 | 8.6 | 24.1 | 60.1 | 5 |
| Wadelius | 1999 | Sweden | Caucasian | Prostate | PB | PCR-SSCP | Age | 171 | 148 | 0.095 | 7.7 | 20.4 | 53.1 | 6 |
| Van Emburgh | 2008 | USA | African | Breast | HB | PCR-SSCP | Age, ethnicity | 54 | 74 | 0.027 | 5.7 | 7.6 | 12.9 | 6 |
| Ibarrola-Villava | 2012 | Spain | Caucasian | Melanoma | HB | TaqMan | Region | 555 | 359 | 0.025 | 6.8 | 16.1 | 43.5 | 6 |
| Ebrahimkhani | 2012 | Iran | Asian | Coleractal | HB | Pyrosequencing | NA | 73 | 95 | 0.063 | 6.3 | 11.2 | 25.1 | 6 |
| Marciniak | 2006 | Poland | Caucasian | Thyroid | HB | PCR-RFLP | NA | 103 | 53 | 0.113 | 5.9 | 11.2 | 27.3 | 6 |
| Siraj | 2008 | Saudi Arabia | Asian | Thyroid | PB | PCR-RFLP | Age | 40 | 510 | 0.126 | 8.2 | 18.8 | 43.3 | 7 |
| Van Emburgh | 2008 | USA | Caucasian | Breast | HB | PCR-SSCP | Age, ethnicity | 386 | 385 | 0.064 | 9.8 | 32.1 | 77.3 | 7 |
| Saarikoski | 1998 | Finland | Caucasian | Lung | PB | PCR-RFLP | NA | 206 | 293 | 0.090 | 9.5 | 29.2 | 70.9 | 8 |
| Jiao | 2007 | USA | Caucasian | Pancreatic | HB | MassCode PCR | Age, sex | 335 | 298 | 0.096 | 10.6 | 36.6 | 82.7 | 8 |
| Kim | 2008 | Germany | Caucasian | Breast | HB | MALDI-TOF MS | Age | 596 | 609 | 0.076 | 14.0 | 52.5 | 95.4 | 8 |
| Zienolddiny | 2008 | Norway | Caucasian | Lung | PB | APEX | Age, sex, smoking | 319 | 381 | 0.066 | 9.7 | 30.8 | 74.4 | 8 |
| Wang | 2011 | India | Asian | Coleractal | PB | PCR-RFLP | Age, sex | 302 | 291 | 0.050 | 7.9 | 21.4 | 56.2 | 8 |
| Murphy | 2007 | Ireland | Caucasian | Oesophageal | PB | Multiplex PCR | Age, sex | 207 | 223 | 0.078 | 8.3 | 23.3 | 59.8 | 9 |
| Küry | 2008 | France | Caucasian | Coleractal | PB | TaqMan | Age, sex | 1023 | 1121 | 0.073 | 20.8 | 75.7 | 99.8 | 9 |
| García-Closas | 2005 | Spain | Caucasian | Bladder | HB | TaqMan | Age, sex, ethnicity, region | 1083 | 1007 | 0.047 | 14.9 | 56.9 | 97.2 | 9 |
| MARIE-GENICA | 2010 | Germany | Caucasian | Breast | PB | MALDI-TOF MS | Age, region | 3148 | 5487 | 0.086 | 66.5 | 100.0 | 100.0 | 9 |
| sorensen | 2004 | Danmark | Caucasian | Lung | PB | PCR-RFLP | NA | 253 | 266 | 0.086 | 9.3 | 28.9 | 71.3 | 9 |
| Northwood | 2010 | UK | Caucasian | Coleractal | PB | TaqMan | NA | 308 | 296 | 0.111 | 11.2 | 38.9 | 85.5 | 9 |
| Yang | 2004 | USA | Mixed | Lung | PB | TaqMan | NA | 229 | 229 | 0.092 | 9.0 | 27.3 | 68.3 | 9 |
| Landi | 2007 | Italy | Caucasian | MPM | PB | APEX | NA | 88 | 391 | 0.051 | 7.8 | 17.1 | 39.9 | 9 |
| Canova | 2009 | Italy | Caucasian | UDTC | Miexed | APEX | Age, sex, ethnicity, region | 1501 | 1449 | 0.073 | 26.7 | 87.5 | 100.0 | 9.5 |
| wang | 2003 | USA | Caucasian | Lung | PB | PCR-RFLP | Age, sex, ethnicity, smoking | 579 | 598 | 0.075 | 13.7 | 51.1 | 94.8 | 10 |
| Moore | 2005 | USA | Mixed | Coleractal | HB | TaqMan | Sex, ethnicity | 700 | 714 | 0.085 | 16.8 | 63.4 | 98.6 | 10 |
| Harris | 1998 | Australia | Mixed | Coleractal | HB | PCR-RFLP | NA | 131 | 199 | 0.073 | 7.6 | 18.7 | 47.2 | 10 |
| Harris | 1998 | Australia | Mixed | Lung | HB | PCR-RFLP | NA | 184 | 199 | 0.073 | 7.8 | 20.3 | 52.6 | 10 |
MPM, malignant pleural mesothelioma; UDTC, upper digestive tract cancer; HB, hospital–based control; PB, population-based control; APEX, arrayed primer extension; PCR, polymerase chain reaction; RFLP, restriction fragment length polymorphism; SSCP, single strand conformation polymorphism; AS, allele-specific; ASO, allele-specific oligonucleotide; MALDI-TOF-MS, matrix-assisted laser desorption/ionization time-of-flight-mass spectrometry; NA: not available.
Power was calculated by the PS software with MAF in controls as the frequency of risk factor and OR was selected with 1.2, 1.5 and 2 as the relative risk.
Stratified analyses of the GSTP1 341C>T polymorphism on cancer risk.
| Variables | N | TT versus CC | CT versus CC | TT/CT versus CC (Dominant model) | TT versus CT/CC (Recessive model) | ||||||||
| OR (95% CI) | Phet. | I2(%) | OR (95% CI) | Phet. | I2(%) | OR (95% CI) | Phet. | I2(%) | OR (95% CI) | Phet. | I2(%) | ||
|
| 28 |
| 0.575 | 0.0 | 1.04(0.97–1.11) | 0.305 | 10.6 | 1.06(0.99–1.13) | 0.281 | 12.3 |
| 0.562 | 0.0 |
|
| |||||||||||||
| Colorectal cancer | 7 | 0.91(0.48–1.71) | 0.349 | 10.5 | 1.01(0.87–1.17) | 0.220 | 27.3 | 1.00(0.87–1.16) | 0.143 | 37.4 | 0.90(0.48–1.71) | 0.375 | 7.0 |
| Lung cancer | 6 | 1.96(0.97–3.92) | 0.274 | 21.2 |
| 0.197 | 31.8 |
| 0.114 | 43.8 | 1.90(0.95–3.82) | 0.292 | 18.7 |
| UDTC | 3 | 1.11(0.54–2.28) | 0.605 | 0.0 | 0.95(0.79–1.14) | 0.245 | 28.8 | 0.96(0.80–1.14) | 0.282 | 21.0 | 1.11(0.54–2.29) | 0.593 | 0.0 |
| Breast cancer | 4 | 1.29(0.84–1.99) | 0.902 | 0.0 | 1.04(0.93–1.16) | 0.730 | 0.0 | 1.05(0.94–1.17) | 0.724 | 0.0 | 1.28(0.83–1.98) | 0.908 | 0.0 |
| Thyroid cancer | 2 | 3.45(0.89–13.29) | 0.929 | 0.0 | 0.85(0.47–1.55) | 0.786 | 0.0 | 1.06(0.61–1.83) | 0.954 | 0.0 | 3.56(0.93–13.69) | 0.913 | 0.0 |
| Other cancer | 6 | 1.94(0.98–3.83) | 0.505 | 0.0 | 1.05(0.87–1.28) | 0.306 | 16.7 | 1.10(0.91–1.32) | 0.665 | 0.0 |
| 0.447 | 0.0 |
|
| |||||||||||||
| African | 1 | NC | 1.48 (0.33–6.65) | 1.48 (0.33–6.65) | NC | ||||||||
| Asian | 4 |
| 0.997 | 0.0 | 1.19(0.72–1.98) | 0.052 | 61.2 | 1.24(0.94–1.64) | 0.120 | 48.6 |
| 0.998 | 0.0 |
| Caucasian | 19 | 1.18(0.88–1.58) | 0.613 | 0.0 | 1.05(0.98–1.13) | 0.349 | 8.7 | 1.06(0.99–1.14) | 0.241 | 17.5 | 1.17(0.88–1.57) | 0.631 | 0.0 |
| Mixed | 4 | 2.24(0.91–5.51) | 0.826 | 0.0 | 0.91(0.74–1.13) | 0.932 | 0.0 | 0.96(0.77–1.18) | 0.926 | 0.0 | 2.28(0.93–5.60) | 0.828 | 0.0 |
|
| |||||||||||||
| Population-based | 14 |
| 0.206 | 22.9 | 1.04(0.96–1.14) | 0.203 | 23.1 | 1.06(0.98–1.16) | 0.163 | 27.2 |
| 0.196 | 23.8 |
| Hospital-based | 13 | 1.52(0.89–2.58) | 0.882 | 0.0 | 1.06(0.93–1.20) | 0.373 | 7.3 | 1.08(0.95–1.22) | 0.422 | 2.5 | 1.52(0.89–2.57) | 0.879 | 0.0 |
|
| |||||||||||||
| Yes | 17 |
| 0.468 | 0.0 | 1.06(0.98–1.14) | 0.133 | 28.3 | 1.07(0.99–1.15) | 0.137 | 27.9 |
| 0.444 | 0.7 |
| No | 11 | 1.28(0.68–2.42) | 0.510 | 0.0 | 0.97(0.82–1.14) | 0.728 | 0.0 | 0.98(0.83–1.16) | 0.669 | 0.0 | 1.29(0.68–2.44) | 0.518 | 0.0 |
|
| |||||||||||||
| ≥9 | 12 | 1.08(0.79–1.48) | 0.700 | 0.0 | 1.03(0.95–1.11) | 0.670 | 0.0 | 1.03(0.96–1.11) | 0.699 | 0.0 | 1.078(0.79–1.48) | 0.697 | 0.0 |
| 6–8 | 13 |
| 0.982 | 0.0 | 1.14(0.93–1.39) | 0.093 | 37.3 | 1.21(0.99–1.47) | 0.080 | 39.1 |
| 0.986 | 0.0 |
| ≤5 | 3 | 1.09(0.15–7.81) | 0.116 | 53.5 | 0.89(0.67–1.19) | 0.588 | 0.0 | 0.94(0.71–1.25) | 0.954 | 0.0 | 1.10(0.14–8.36) | 0.103 | 56.0 |
| >5 | 25 |
| 0.715 | 0.0 | 1.05(0.98–1.13) | 0.257 | 14.5 | 1.07(0.99–1.14) | 0.186 | 19.9 |
| 0.729 | 0.0 |
UDTC, upper digestive tract cancer; Phet., P value of Q -test for heterogeneity test; NC, no insufficient data for calculation; N, number of studies for comparison; The figures given in bold indicate statistically significant values.
OR adjusted for age, family history, smoking history, age of menarche, age of first birth and body mass index according to the author.
Random-effect model was used.
Figure 2Forest plot of cancer risk associates with GSTP1 341C>T polymorphism under homozygote comparison (TT versus CC) in different ethnicity.
African ethnic is omitted due to the insufficient data. The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares reflects the study specific weight. The diamond represents the pooled OR and 95% CI.
Figure 3Forest plot of cancer risk associate with GSTP1 341C>T polymorphism under dominant model (TT/CT versus CC) of different types of cancers.
The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares reflects the study specific weight. The diamond represents the pooled OR and 95% CI.
Figure 4Begg's funnel plot for publication bias test (TT versus CC).
Each point represents a separate study for the indicated association. LogOR, natural logarithm of OR. Horizontal line, mean effect size.
Figure 5Begg's funnel plot for publication bias test (TT/CT versus CC).
Each point represents a separate study for the indicated association. LogOR, natural logarithm of OR. Horizontal line, mean effect size.