Literature DB >> 23435562

Structural basis for the nuclear export activity of Importin13.

Marlene Grünwald1, Daniela Lazzaretti, Fulvia Bono.   

Abstract

Importin13 (Imp13) is a bidirectional karyopherin that can mediate both import and export of cargoes. Imp13 recognizes several import cargoes, which include the exon junction complex components Mago-Y14 and the E2 SUMO-conjugating enzyme Ubc9, and one known export cargo, the translation initiation factor 1A (eIF1A). To understand how Imp13 can perform double duty, we determined the 3.6-Å crystal structure of Imp13 in complex with RanGTP and with eIF1A. eIF1A binds at the inner surface of the Imp13 C-terminal arch adjacent and concomitantly to RanGTP illustrating how eIF1A can be exported by Imp13. Moreover, the 3.0-Å structure of Imp13 in its unbound state reveals the existence of an open conformation in the cytoplasm that explains export cargo release and completes the export branch of the Imp13 pathway. Finally, we demonstrate that Imp13 is able to bind and export eIF1A in vivo and that its function is essential.

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Year:  2013        PMID: 23435562      PMCID: PMC3604722          DOI: 10.1038/emboj.2013.29

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  71 in total

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Authors:  M S Rodriguez; C Dargemont; R T Hay
Journal:  J Biol Chem       Date:  2000-12-21       Impact factor: 5.157

2.  Ran-binding protein 5 (RanBP5) is related to the nuclear transport factor importin-beta but interacts differently with RanBP1.

Authors:  R Deane; W Schäfer; H P Zimmermann; L Mueller; D Görlich; S Prehn; H Ponstingl; F R Bischoff
Journal:  Mol Cell Biol       Date:  1997-09       Impact factor: 4.272

Review 3.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

4.  Structural and energetic basis of ALS-causing mutations in the atypical proline-tyrosine nuclear localization signal of the Fused in Sarcoma protein (FUS).

Authors:  Zi Chao Zhang; Yuh Min Chook
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-09       Impact factor: 11.205

5.  Conformational heterogeneity of karyopherin beta2 is segmental.

Authors:  Ahmet E Cansizoglu; Yuh Min Chook
Journal:  Structure       Date:  2007-11       Impact factor: 5.006

6.  Leptomycin B is an inhibitor of nuclear export: inhibition of nucleo-cytoplasmic translocation of the human immunodeficiency virus type 1 (HIV-1) Rev protein and Rev-dependent mRNA.

Authors:  B Wolff; J J Sanglier; Y Wang
Journal:  Chem Biol       Date:  1997-02

7.  RanGAP1 induces GTPase activity of nuclear Ras-related Ran.

Authors:  F R Bischoff; C Klebe; J Kretschmer; A Wittinghofer; H Ponstingl
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-29       Impact factor: 11.205

8.  The eIF1A solution structure reveals a large RNA-binding surface important for scanning function.

Authors:  J L Battiste; T V Pestova; C U Hellen; G Wagner
Journal:  Mol Cell       Date:  2000-01       Impact factor: 17.970

9.  Magoh, a human homolog of Drosophila mago nashi protein, is a component of the splicing-dependent exon-exon junction complex.

Authors:  N Kataoka; M D Diem; V N Kim; J Yong; G Dreyfuss
Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

10.  The karyopherin Kap142p/Msn5p mediates nuclear import and nuclear export of different cargo proteins.

Authors:  K Yoshida; G Blobel
Journal:  J Cell Biol       Date:  2001-02-19       Impact factor: 10.539

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  15 in total

1.  Combining dehydration, construct optimization and improved data collection to solve the crystal structure of a CRM1-RanGTP-SPN1-Nup214 quaternary nuclear export complex.

Authors:  Thomas Monecke; Achim Dickmanns; Manfred S Weiss; Sarah A Port; Ralph H Kehlenbach; Ralf Ficner
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-11-18       Impact factor: 1.056

2.  Extensive Identification and In-depth Validation of Importin 13 Cargoes.

Authors:  Imke Baade; Christiane Spillner; Kerstin Schmitt; Oliver Valerius; Ralph H Kehlenbach
Journal:  Mol Cell Proteomics       Date:  2018-04-17       Impact factor: 5.911

3.  Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chaperone.

Authors:  Abhilash Padavannil; Prithwijit Sarkar; Seung Joong Kim; Tolga Cagatay; Jenny Jiou; Chad A Brautigam; Diana R Tomchick; Andrej Sali; Sheena D'Arcy; Yuh Min Chook
Journal:  Elife       Date:  2019-03-11       Impact factor: 8.140

Review 4.  Karyopherins in cancer.

Authors:  Tolga Çağatay; Yuh Min Chook
Journal:  Curr Opin Cell Biol       Date:  2018-02-04       Impact factor: 8.382

Review 5.  Karyopherin-mediated nucleocytoplasmic transport.

Authors:  Casey E Wing; Ho Yee Joyce Fung; Yuh Min Chook
Journal:  Nat Rev Mol Cell Biol       Date:  2022-01-20       Impact factor: 113.915

6.  Structure of the exportin Xpo4 in complex with RanGTP and the hypusine-containing translation factor eIF5A.

Authors:  Metin Aksu; Sergei Trakhanov; Dirk Görlich
Journal:  Nat Commun       Date:  2016-06-16       Impact factor: 14.919

7.  Structural basis for nuclear import of splicing factors by human Transportin 3.

Authors:  Goedele N Maertens; Nicola J Cook; Weifeng Wang; Stephen Hare; Saumya Shree Gupta; Ilker Öztop; KyeongEun Lee; Valerie E Pye; Ophélie Cosnefroy; Ambrosius P Snijders; Vineet N KewalRamani; Ariberto Fassati; Alan Engelman; Peter Cherepanov
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

8.  Structural basis for recognition and remodeling of the TBP:DNA:NC2 complex by Mot1.

Authors:  Agata Butryn; Jan M Schuller; Gabriele Stoehr; Petra Runge-Wollmann; Friedrich Förster; David T Auble; Karl-Peter Hopfner
Journal:  Elife       Date:  2015-08-10       Impact factor: 8.140

9.  Homologous Transcription Factors DUX4 and DUX4c Associate with Cytoplasmic Proteins during Muscle Differentiation.

Authors:  Eugénie Ansseau; Jocelyn O Eidahl; Céline Lancelot; Alexandra Tassin; Christel Matteotti; Cassandre Yip; Jian Liu; Baptiste Leroy; Céline Hubeau; Cécile Gerbaux; Samuel Cloet; Armelle Wauters; Sabrina Zorbo; Pierre Meyer; Isabelle Pirson; Dalila Laoudj-Chenivesse; Ruddy Wattiez; Scott Q Harper; Alexandra Belayew; Frédérique Coppée
Journal:  PLoS One       Date:  2016-01-27       Impact factor: 3.240

10.  Dissecting in vivo steady-state dynamics of karyopherin-dependent nuclear transport.

Authors:  Ogheneochukome Lolodi; Hiroya Yamazaki; Shotaro Otsuka; Masahiro Kumeta; Shige H Yoshimura
Journal:  Mol Biol Cell       Date:  2015-11-04       Impact factor: 4.138

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