Literature DB >> 23431147

Avalanche-like behavior in ciliary import.

William B Ludington1, Kimberly A Wemmer, Karl F Lechtreck, George B Witman, Wallace F Marshall.   

Abstract

Cilia and flagella are microtubule-based organelles that protrude from the cell body. Ciliary assembly requires intraflagellar transport (IFT), a motile system that delivers cargo from the cell body to the flagellar tip for assembly. The process controlling injections of IFT proteins into the flagellar compartment is, therefore, crucial to ciliogenesis. Extensive biochemical and genetic analyses have determined the molecular machinery of IFT, but these studies do not explain what regulates IFT injection rate. Here, we provide evidence that IFT injections result from avalanche-like releases of accumulated IFT material at the flagellar base and that the key regulated feature of length control is the recruitment of IFT material to the flagellar base. We used total internal reflection fluorescence microscopy of IFT proteins in live cells to quantify the size and frequency of injections over time. The injection dynamics reveal a power-law tailed distribution of injection event sizes and a negative correlation between injection size and frequency, as well as rich behaviors such as quasiperiodicity, bursting, and long-memory effects tied to the size of the localized load of IFT material awaiting injection at the flagellar base, collectively indicating that IFT injection dynamics result from avalanche-like behavior. Computational models based on avalanching recapitulate observed IFT dynamics, and we further show that the flagellar Ras-related nuclear protein (Ran) guanosine 5'-triphosphate (GTP) gradient can in theory act as a flagellar length sensor to regulate this localized accumulation of IFT. These results demonstrate that a self-organizing, physical mechanism can control a biochemically complex intracellular transport pathway.

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Year:  2013        PMID: 23431147      PMCID: PMC3593837          DOI: 10.1073/pnas.1217354110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

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2.  Flagellar length control system: testing a simple model based on intraflagellar transport and turnover.

Authors:  Wallace F Marshall; Hongmin Qin; Mónica Rodrigo Brenni; Joel L Rosenbaum
Journal:  Mol Biol Cell       Date:  2004-10-20       Impact factor: 4.138

3.  SnapShot: Intraflagellar transport.

Authors:  Douglas G Cole; William J Snell
Journal:  Cell       Date:  2009-05-15       Impact factor: 41.582

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Journal:  Phys Rev A       Date:  1992-05-15       Impact factor: 3.140

5.  The kinetic mechanism of Ran--nucleotide exchange catalyzed by RCC1.

Authors:  C Klebe; H Prinz; A Wittinghofer; R S Goody
Journal:  Biochemistry       Date:  1995-10-03       Impact factor: 3.162

6.  Ciliary entry of the kinesin-2 motor KIF17 is regulated by importin-beta2 and RanGTP.

Authors:  John F Dishinger; Hooi Lynn Kee; Paul M Jenkins; Shuling Fan; Toby W Hurd; Jennetta W Hammond; Yen Nhu-Thi Truong; Ben Margolis; Jeffrey R Martens; Kristen J Verhey
Journal:  Nat Cell Biol       Date:  2010-06-06       Impact factor: 28.824

7.  CEP290 tethers flagellar transition zone microtubules to the membrane and regulates flagellar protein content.

Authors:  Branch Craige; Che-Chia Tsao; Dennis R Diener; Yuqing Hou; Karl-Ferdinand Lechtreck; Joel L Rosenbaum; George B Witman
Journal:  J Cell Biol       Date:  2010-09-06       Impact factor: 10.539

8.  Synthetic in vitro transcriptional oscillators.

Authors:  Jongmin Kim; Erik Winfree
Journal:  Mol Syst Biol       Date:  2011-02-01       Impact factor: 11.429

9.  Nuclear transport of single molecules: dwell times at the nuclear pore complex.

Authors:  Ulrich Kubitscheck; David Grünwald; Andreas Hoekstra; Daniel Rohleder; Thorsten Kues; Jan Peter Siebrasse; Reiner Peters
Journal:  J Cell Biol       Date:  2005-01-17       Impact factor: 10.539

10.  Intraflagellar transport balances continuous turnover of outer doublet microtubules: implications for flagellar length control.

Authors:  W F Marshall; J L Rosenbaum
Journal:  J Cell Biol       Date:  2001-10-29       Impact factor: 10.539

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  41 in total

1.  Functional differentiation of cooperating kinesin-2 motors orchestrates cargo import and transport in C. elegans cilia.

Authors:  Bram Prevo; Pierre Mangeol; Felix Oswald; Jonathan M Scholey; Erwin J G Peterman
Journal:  Nat Cell Biol       Date:  2015-11-02       Impact factor: 28.824

2.  Actin is required for IFT regulation in Chlamydomonas reinhardtii.

Authors:  Prachee Avasthi; Masayuki Onishi; Joel Karpiak; Ryosuke Yamamoto; Luke Mackinder; Martin C Jonikas; Winfield S Sale; Brian Shoichet; John R Pringle; Wallace F Marshall
Journal:  Curr Biol       Date:  2014-08-21       Impact factor: 10.834

3.  Total internal reflection fluorescence microscopy of intraflagellar transport in Tetrahymena thermophila.

Authors:  Yu-Yang Jiang; Karl Lechtreck; Jacek Gaertig
Journal:  Methods Cell Biol       Date:  2015-02-14       Impact factor: 1.441

4.  Efficient live fluorescence imaging of intraflagellar transport in mammalian primary cilia.

Authors:  Hiroaki Ishikawa; Wallace F Marshall
Journal:  Methods Cell Biol       Date:  2015-03-07       Impact factor: 1.441

5.  The Chlamydomonas mutant pf27 reveals novel features of ciliary radial spoke assembly.

Authors:  Lea M Alford; Alexa L Mattheyses; Emily L Hunter; Huawen Lin; Susan K Dutcher; Winfield S Sale
Journal:  Cytoskeleton (Hoboken)       Date:  2013-12

6.  A systematic comparison of mathematical models for inherent measurement of ciliary length: how a cell can measure length and volume.

Authors:  William B Ludington; Hiroaki Ishikawa; Yevgeniy V Serebrenik; Alex Ritter; Rogelio A Hernandez-Lopez; Julia Gunzenhauser; Elisa Kannegaard; Wallace F Marshall
Journal:  Biophys J       Date:  2015-03-24       Impact factor: 4.033

7.  Speed and Diffusion of Kinesin-2 Are Competing Limiting Factors in Flagellar Length-Control Model.

Authors:  Rui Ma; Nathan L Hendel; Wallace F Marshall; Hongmin Qin
Journal:  Biophys J       Date:  2020-04-22       Impact factor: 4.033

Review 8.  Intraflagellar transport: mechanisms of motor action, cooperation, and cargo delivery.

Authors:  Bram Prevo; Jonathan M Scholey; Erwin J G Peterman
Journal:  FEBS J       Date:  2017-04-18       Impact factor: 5.542

Review 9.  How Cells Measure Length on Subcellular Scales.

Authors:  Wallace F Marshall
Journal:  Trends Cell Biol       Date:  2015-10-01       Impact factor: 20.808

Review 10.  Protein transport in growing and steady-state cilia.

Authors:  Karl F Lechtreck; Julie C Van De Weghe; James Aaron Harris; Peiwei Liu
Journal:  Traffic       Date:  2017-03-29       Impact factor: 6.215

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