| Literature DB >> 23424575 |
Monserrath I Rodríguez-Mora1, Reyna Reyes-Martínez, Marcos Flores-Alamo, Juventino J García, David Morales-Morales.
Abstract
The title compound, C(12)H(10)N(2)O, a second monoclinic poly-morph of (E)-phen-yl(pyridin-2-yl)methanone oxime crystallizes in the space group P2(1)/n (Z = 4). The previously reported polymorph [Taga et al. (1990 ▶). Acta Cryst. C46, 2241-2243] occurs in the space group C2/c (Z = 8). In the crystal, pairs of bifurcated O-H⋯(N,O) hydrogen bonds link the mol-ecules into inversion dimers. The dimers are linked by C-H⋯π inter-actions, forming a linear arrangement. The dihedral angle between the pyridine and phenyl rings is 67.70 (8)°.Entities:
Year: 2013 PMID: 23424575 PMCID: PMC3569829 DOI: 10.1107/S1600536813002377
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H10N2O | |
| Monoclinic, | Mo |
| Cell parameters from 1437 reflections | |
| θ = 3.5–26.0° | |
| µ = 0.09 mm−1 | |
| β = 97.743 (7)° | |
| Lamina, pale pink | |
| 0.55 × 0.31 × 0.06 mm |
| Agilent Xcalibur (Atlas, Gemini) diffractometer | 1918 independent reflections |
| Graphite monochromator | 1559 reflections with |
| Detector resolution: 10.4685 pixels mm-1 | |
| ω scans | θmax = 26.1°, θmin = 3.5° |
| Absorption correction: analytical [ | |
| 4256 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1918 reflections | (Δ/σ)max < 0.001 |
| 139 parameters | Δρmax = 0.21 e Å−3 |
| 1 restraint | Δρmin = −0.22 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | −0.01894 (19) | 0.05043 (5) | 0.85027 (15) | 0.0286 (3) | |
| N1 | 0.6746 (2) | 0.13409 (6) | 1.14331 (18) | 0.0290 (3) | |
| N2 | 0.1685 (2) | 0.04881 (5) | 0.99337 (16) | 0.0233 (3) | |
| C1 | 0.2991 (2) | 0.13583 (6) | 0.84972 (19) | 0.0198 (3) | |
| C2 | 0.1085 (3) | 0.17379 (7) | 0.8370 (2) | 0.0243 (4) | |
| H2 | −0.0075 | 0.1701 | 0.917 | 0.029* | |
| C3 | 0.0870 (3) | 0.21697 (7) | 0.7082 (2) | 0.0261 (4) | |
| H3 | −0.0419 | 0.2433 | 0.7016 | 0.031* | |
| C4 | 0.2528 (3) | 0.22192 (7) | 0.5889 (2) | 0.0263 (4) | |
| H4 | 0.2369 | 0.2513 | 0.4996 | 0.032* | |
| C5 | 0.4416 (3) | 0.18395 (7) | 0.6003 (2) | 0.0279 (4) | |
| H5 | 0.5546 | 0.1871 | 0.5176 | 0.034* | |
| C6 | 0.4672 (3) | 0.14138 (7) | 0.7312 (2) | 0.0249 (4) | |
| H6 | 0.5994 | 0.116 | 0.74 | 0.03* | |
| C7 | 0.3204 (2) | 0.08948 (6) | 0.98862 (19) | 0.0201 (3) | |
| C8 | 0.5261 (3) | 0.08876 (7) | 1.13697 (19) | 0.0219 (3) | |
| C9 | 0.5601 (3) | 0.04407 (7) | 1.2600 (2) | 0.0308 (4) | |
| H9 | 0.4548 | 0.0121 | 1.2517 | 0.037* | |
| C10 | 0.7525 (3) | 0.04717 (8) | 1.3962 (2) | 0.0382 (5) | |
| H10 | 0.7786 | 0.0173 | 1.4835 | 0.046* | |
| C11 | 0.9048 (3) | 0.09311 (8) | 1.4052 (2) | 0.0346 (4) | |
| H11 | 1.0369 | 0.0958 | 1.4978 | 0.042* | |
| C12 | 0.8605 (3) | 0.13487 (8) | 1.2768 (2) | 0.0335 (4) | |
| H12 | 0.9671 | 0.1665 | 1.2816 | 0.04* | |
| H1D | −0.097 (3) | 0.0196 (8) | 0.878 (3) | 0.05* |
| O1 | 0.0289 (6) | 0.0258 (6) | 0.0284 (6) | −0.0061 (5) | −0.0054 (5) | 0.0065 (5) |
| N1 | 0.0306 (7) | 0.0282 (8) | 0.0266 (7) | −0.0043 (6) | −0.0018 (6) | −0.0015 (6) |
| N2 | 0.0250 (7) | 0.0224 (7) | 0.0215 (6) | 0.0002 (5) | −0.0007 (5) | 0.0012 (5) |
| C1 | 0.0225 (7) | 0.0183 (8) | 0.0179 (7) | −0.0019 (6) | 0.0000 (6) | −0.0007 (6) |
| C2 | 0.0257 (8) | 0.0235 (8) | 0.0250 (8) | 0.0008 (6) | 0.0081 (6) | 0.0014 (6) |
| C3 | 0.0271 (8) | 0.0197 (8) | 0.0312 (9) | 0.0029 (6) | 0.0033 (6) | 0.0017 (7) |
| C4 | 0.0302 (8) | 0.0242 (8) | 0.0236 (8) | −0.0054 (7) | 0.0004 (6) | 0.0055 (6) |
| C5 | 0.0256 (8) | 0.0350 (10) | 0.0242 (8) | −0.0023 (7) | 0.0069 (6) | 0.0041 (7) |
| C6 | 0.0201 (7) | 0.0286 (9) | 0.0259 (8) | 0.0023 (7) | 0.0027 (6) | 0.0020 (7) |
| C7 | 0.0233 (7) | 0.0184 (7) | 0.0193 (7) | 0.0030 (6) | 0.0050 (6) | −0.0007 (6) |
| C8 | 0.0243 (8) | 0.0227 (8) | 0.0192 (7) | 0.0038 (6) | 0.0049 (6) | −0.0009 (6) |
| C9 | 0.0350 (9) | 0.0263 (9) | 0.0316 (9) | 0.0033 (7) | 0.0062 (7) | 0.0077 (7) |
| C10 | 0.0451 (10) | 0.0414 (11) | 0.0279 (9) | 0.0161 (9) | 0.0049 (8) | 0.0138 (8) |
| C11 | 0.0298 (9) | 0.0475 (11) | 0.0246 (8) | 0.0082 (8) | −0.0029 (7) | −0.0042 (8) |
| C12 | 0.0301 (9) | 0.0377 (10) | 0.0308 (9) | −0.0060 (8) | −0.0026 (7) | −0.0063 (8) |
| O1—N2 | 1.4015 (15) | C4—H4 | 0.95 |
| O1—H1D | 0.882 (15) | C5—C6 | 1.384 (2) |
| N1—C8 | 1.346 (2) | C5—H5 | 0.95 |
| N1—C12 | 1.349 (2) | C6—H6 | 0.95 |
| N2—C7 | 1.2832 (19) | C7—C8 | 1.495 (2) |
| C1—C2 | 1.389 (2) | C8—C9 | 1.382 (2) |
| C1—C6 | 1.391 (2) | C9—C10 | 1.388 (2) |
| C1—C7 | 1.488 (2) | C9—H9 | 0.95 |
| C2—C3 | 1.383 (2) | C10—C11 | 1.370 (3) |
| C2—H2 | 0.95 | C10—H10 | 0.95 |
| C3—C4 | 1.382 (2) | C11—C12 | 1.363 (3) |
| C3—H3 | 0.95 | C11—H11 | 0.95 |
| C4—C5 | 1.382 (2) | C12—H12 | 0.95 |
| N2—O1—H1D | 98.8 (13) | C1—C6—H6 | 120.1 |
| C8—N1—C12 | 117.37 (14) | N2—C7—C1 | 124.14 (13) |
| C7—N2—O1 | 113.76 (12) | N2—C7—C8 | 115.55 (13) |
| C2—C1—C6 | 119.46 (14) | C1—C7—C8 | 120.29 (13) |
| C2—C1—C7 | 119.83 (13) | N1—C8—C9 | 122.33 (14) |
| C6—C1—C7 | 120.71 (13) | N1—C8—C7 | 116.07 (13) |
| C3—C2—C1 | 120.25 (14) | C9—C8—C7 | 121.60 (14) |
| C3—C2—H2 | 119.9 | C8—C9—C10 | 118.12 (16) |
| C1—C2—H2 | 119.9 | C8—C9—H9 | 120.9 |
| C4—C3—C2 | 120.15 (14) | C10—C9—H9 | 120.9 |
| C4—C3—H3 | 119.9 | C11—C10—C9 | 120.34 (16) |
| C2—C3—H3 | 119.9 | C11—C10—H10 | 119.8 |
| C5—C4—C3 | 119.75 (15) | C9—C10—H10 | 119.8 |
| C5—C4—H4 | 120.1 | C12—C11—C10 | 117.75 (15) |
| C3—C4—H4 | 120.1 | C12—C11—H11 | 121.1 |
| C4—C5—C6 | 120.48 (15) | C10—C11—H11 | 121.1 |
| C4—C5—H5 | 119.8 | N1—C12—C11 | 124.08 (16) |
| C6—C5—H5 | 119.8 | N1—C12—H12 | 118 |
| C5—C6—C1 | 119.89 (14) | C11—C12—H12 | 118 |
| C5—C6—H6 | 120.1 | ||
| C6—C1—C2—C3 | −0.4 (2) | C6—C1—C7—C8 | 64.41 (19) |
| C7—C1—C2—C3 | −179.93 (13) | C12—N1—C8—C9 | −0.5 (2) |
| C1—C2—C3—C4 | 1.3 (2) | C12—N1—C8—C7 | 179.37 (14) |
| C2—C3—C4—C5 | −0.7 (2) | N2—C7—C8—N1 | −174.03 (13) |
| C3—C4—C5—C6 | −0.6 (2) | C1—C7—C8—N1 | 4.9 (2) |
| C4—C5—C6—C1 | 1.5 (2) | N2—C7—C8—C9 | 5.8 (2) |
| C2—C1—C6—C5 | −0.9 (2) | C1—C7—C8—C9 | −175.19 (14) |
| C7—C1—C6—C5 | 178.56 (14) | N1—C8—C9—C10 | 1.2 (2) |
| O1—N2—C7—C1 | 2.2 (2) | C7—C8—C9—C10 | −178.63 (15) |
| O1—N2—C7—C8 | −178.89 (12) | C8—C9—C10—C11 | −0.9 (3) |
| C2—C1—C7—N2 | 62.8 (2) | C9—C10—C11—C12 | −0.1 (3) |
| C6—C1—C7—N2 | −116.71 (17) | C8—N1—C12—C11 | −0.6 (3) |
| C2—C1—C7—C8 | −116.09 (16) | C10—C11—C12—N1 | 0.9 (3) |
| H··· | ||||
| O1—H1 | 0.88 (2) | 1.93 (2) | 2.7696 (17) | 159 (2) |
| O1—H1 | 0.88 (2) | 2.61 (2) | 3.225 (2) | 127 (2) |
| C11—H11··· | 0.95 | 2.78 | 3.5453 (18) | 139 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C1–C6 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.88 (2) | 1.93 (2) | 2.7696 (17) | 159 (2) |
| O1—H1 | 0.88 (2) | 2.61 (2) | 3.225 (2) | 127 (2) |
| C11—H11⋯ | 0.95 | 2.78 | 3.5453 (18) | 139 |
Symmetry codes: (i) ; (ii) .