Literature DB >> 23424546

14-Eth-oxy-4,6,9-trimethyl-8,12-dioxa-4,6-diaza-tetra-cyclo-[8.8.0.0(2,7).0(13,18)]octa-deca-2(7),13,15,17-tetra-ene-3,5,11-trione.

G Jagadeesan1, D Kannan, M Bakthadoss, S Aravindhan.   

Abstract

In the title compound, C(19)H(20)N(2)O(6), the pyrone and pyran rings adopt envelope conformations with the same common C atom as the flap, the dihedral angle between the planes of the remaining ring atoms being 68.27 (4)°. The planar atoms of the pyran ring and the diaza-cyclic ring are almost coplanar, the dihedral angle between their mean planes being 3.29 (7)°. Moreover, the planar atoms of the pyrone ring and benzene ring of the coumarin unit are also close to coplanar, the dihedral angle between their mean planes being 8.03 (9)°. The meth-oxy group lies in the plane of the benzene ring, with a dihedral angle between their mean planes of 9.4 (2)°. In the crystal, the molecules are linked by C-H⋯O hydrogen bonds resulting in sheets of mol-ecules in the ac plane.

Entities:  

Year:  2013        PMID: 23424546      PMCID: PMC3569800          DOI: 10.1107/S1600536813000743

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of pyran­ocoumarin compounds, see: Kawaii et al. (2001 ▶); Goel et al. (1997 ▶); Su et al. (2009 ▶). For a related structure, see: Pojarová et al. (2012 ▶).

Experimental

Crystal data

C19H20N2O6 M = 372.37 Monoclinic, a = 9.3526 (3) Å b = 17.9559 (5) Å c = 10.9158 (3) Å β = 101.346 (1)° V = 1797.31 (9) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker 2004 ▶) T min = 0.979, T max = 0.983 21571 measured reflections 5615 independent reflections 3743 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.151 S = 1.03 5615 reflections 245 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813000743/pv2613sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813000743/pv2613Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813000743/pv2613Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H20N2O6F(000) = 784
Mr = 372.37Dx = 1.376 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8834 reflections
a = 9.3526 (3) Åθ = 2.1–31.2°
b = 17.9559 (5) ŵ = 0.10 mm1
c = 10.9158 (3) ÅT = 293 K
β = 101.346 (1)°Block, colourless
V = 1797.31 (9) Å30.25 × 0.20 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer5615 independent reflections
Radiation source: fine-focus sealed tube3743 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
ω and φ scanθmax = 31.2°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker 2004)h = −13→13
Tmin = 0.979, Tmax = 0.983k = −26→25
21571 measured reflectionsl = −15→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.151w = 1/[σ2(Fo2) + (0.0701P)2 + 0.3178P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
5615 reflectionsΔρmax = 0.31 e Å3
245 parametersΔρmin = −0.20 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0038 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C40.13936 (13)0.22959 (7)0.17644 (11)0.0356 (3)
H40.23340.20500.20610.043*
O20.12546 (11)0.18881 (6)−0.07686 (9)0.0488 (3)
O4−0.00265 (11)0.37272 (5)0.16207 (10)0.0509 (3)
C30.15760 (13)0.28831 (7)0.07958 (12)0.0385 (3)
H30.23850.32110.11630.046*
C50.09372 (13)0.26778 (7)0.28399 (12)0.0383 (3)
N10.07800 (14)0.27406 (8)0.50011 (11)0.0533 (3)
O30.27612 (11)0.27910 (7)−0.09473 (10)0.0570 (3)
O60.18464 (12)0.17436 (7)0.42755 (10)0.0582 (3)
C90.03042 (13)0.17227 (7)0.11316 (12)0.0359 (3)
N2−0.01928 (14)0.37032 (8)0.36503 (13)0.0546 (3)
C20.01853 (15)0.33507 (7)0.04908 (13)0.0423 (3)
H2−0.06450.30190.02030.051*
C60.02593 (14)0.33416 (8)0.26892 (13)0.0429 (3)
C80.12327 (14)0.23418 (9)0.40514 (12)0.0443 (3)
C150.19303 (14)0.25353 (8)−0.03619 (12)0.0422 (3)
C100.02937 (14)0.15529 (7)−0.01043 (12)0.0394 (3)
C11−0.06657 (16)0.10293 (8)−0.07638 (13)0.0454 (3)
C14−0.07055 (15)0.13790 (8)0.17140 (13)0.0433 (3)
H14−0.07340.14930.25400.052*
O1−0.05510 (14)0.09050 (6)−0.19682 (10)0.0605 (3)
C12−0.16431 (17)0.06843 (8)−0.01514 (15)0.0517 (4)
H12−0.22850.0328−0.05630.062*
C13−0.16670 (17)0.08690 (8)0.10732 (15)0.0516 (4)
H13−0.23460.06440.14710.062*
C16−0.13766 (19)0.03015 (9)−0.26109 (15)0.0594 (4)
H16A−0.24100.0417−0.27660.071*
H16B−0.1213−0.0149−0.21130.071*
C70.00306 (18)0.33991 (11)0.48375 (16)0.0592 (4)
O5−0.04221 (16)0.37072 (9)0.56792 (13)0.0855 (5)
C180.1006 (2)0.24059 (13)0.62469 (15)0.0734 (5)
H18A0.15380.19480.62490.110*
H18B0.00790.23070.64640.110*
H18C0.15510.27430.68450.110*
C17−0.0879 (2)0.01967 (12)−0.38124 (18)0.0775 (6)
H17A−0.1412−0.0205−0.42700.116*
H17B0.01440.0082−0.36460.116*
H17C−0.10470.0646−0.42970.116*
C19−0.1050 (2)0.43883 (11)0.3431 (2)0.0813 (6)
H19A−0.11350.45380.25750.122*
H19B−0.05740.47740.39690.122*
H19C−0.20040.43020.36030.122*
C10.0188 (2)0.39517 (9)−0.04694 (17)0.0625 (4)
H1A−0.07280.4211−0.06080.094*
H1C0.03280.3732−0.12380.094*
H1B0.09640.4296−0.01750.094*
U11U22U33U12U13U23
C40.0312 (5)0.0409 (6)0.0348 (6)0.0038 (5)0.0069 (5)0.0008 (5)
O20.0530 (6)0.0568 (6)0.0407 (5)−0.0071 (5)0.0197 (4)−0.0078 (4)
O40.0557 (6)0.0419 (5)0.0550 (6)0.0095 (4)0.0102 (5)−0.0018 (4)
C30.0338 (6)0.0433 (7)0.0378 (6)−0.0037 (5)0.0056 (5)0.0004 (5)
C50.0337 (6)0.0455 (7)0.0354 (6)−0.0006 (5)0.0063 (5)−0.0050 (5)
N10.0478 (7)0.0770 (9)0.0351 (6)−0.0090 (6)0.0083 (5)−0.0115 (6)
O30.0472 (6)0.0811 (8)0.0460 (6)−0.0100 (5)0.0172 (5)0.0057 (5)
O60.0537 (6)0.0729 (7)0.0452 (6)0.0102 (6)0.0027 (5)0.0103 (5)
C90.0362 (6)0.0346 (6)0.0373 (6)0.0044 (5)0.0082 (5)−0.0003 (5)
N20.0510 (7)0.0551 (8)0.0589 (8)0.0028 (6)0.0140 (6)−0.0192 (6)
C20.0408 (7)0.0396 (7)0.0446 (7)0.0010 (5)0.0035 (5)0.0017 (5)
C60.0367 (6)0.0453 (7)0.0464 (7)−0.0019 (5)0.0073 (5)−0.0100 (6)
C80.0331 (6)0.0612 (9)0.0368 (6)−0.0047 (6)0.0026 (5)−0.0045 (6)
C150.0351 (6)0.0540 (8)0.0373 (6)0.0001 (6)0.0069 (5)0.0043 (6)
C100.0416 (7)0.0382 (6)0.0402 (6)0.0013 (5)0.0126 (5)−0.0017 (5)
C110.0527 (8)0.0407 (7)0.0418 (7)0.0033 (6)0.0071 (6)−0.0053 (6)
C140.0458 (7)0.0429 (7)0.0433 (7)−0.0003 (6)0.0135 (6)0.0008 (6)
O10.0773 (8)0.0580 (7)0.0462 (6)−0.0103 (6)0.0123 (5)−0.0163 (5)
C120.0510 (8)0.0416 (7)0.0601 (9)−0.0067 (6)0.0052 (7)−0.0045 (7)
C130.0511 (8)0.0475 (8)0.0588 (9)−0.0084 (6)0.0172 (7)0.0019 (7)
C160.0656 (10)0.0489 (8)0.0585 (9)0.0060 (7)−0.0005 (7)−0.0188 (7)
C70.0491 (8)0.0773 (11)0.0524 (9)−0.0082 (8)0.0126 (7)−0.0248 (8)
O50.0845 (9)0.1113 (11)0.0661 (8)0.0010 (8)0.0283 (7)−0.0401 (8)
C180.0725 (11)0.1111 (16)0.0368 (8)−0.0087 (11)0.0110 (8)−0.0010 (9)
C170.0926 (14)0.0744 (12)0.0624 (11)0.0085 (11)0.0076 (10)−0.0287 (10)
C190.0893 (14)0.0655 (11)0.0923 (15)0.0240 (10)0.0258 (11)−0.0246 (11)
C10.0695 (11)0.0531 (9)0.0621 (10)0.0046 (8)0.0062 (8)0.0156 (8)
C4—C51.4926 (18)C10—C111.3975 (19)
C4—C91.5157 (17)C11—O11.3584 (17)
C4—C31.5263 (18)C11—C121.381 (2)
C4—H40.9800C14—C131.374 (2)
O2—C151.3552 (17)C14—H140.9300
O2—C101.3972 (16)O1—C161.4316 (18)
O4—C61.3373 (18)C12—C131.382 (2)
O4—C21.4538 (17)C12—H120.9300
C3—C151.5038 (19)C13—H130.9300
C3—C21.5288 (18)C16—C171.487 (3)
C3—H30.9800C16—H16A0.9700
C5—C61.3448 (19)C16—H16B0.9700
C5—C81.4301 (19)C7—O51.2175 (19)
N1—C71.368 (2)C18—H18A0.9600
N1—C81.3926 (19)C18—H18B0.9600
N1—C181.464 (2)C18—H18C0.9600
O3—C151.1910 (16)C17—H17A0.9600
O6—C81.2197 (19)C17—H17B0.9600
C9—C101.3812 (18)C17—H17C0.9600
C9—C141.3832 (18)C19—H19A0.9600
N2—C61.3695 (18)C19—H19B0.9600
N2—C71.384 (2)C19—H19C0.9600
N2—C191.462 (2)C1—H1A0.9600
C2—C11.505 (2)C1—H1C0.9600
C2—H20.9800C1—H1B0.9600
C5—C4—C9113.56 (10)O1—C11—C10116.37 (13)
C5—C4—C3108.40 (11)C12—C11—C10118.13 (13)
C9—C4—C3108.06 (10)C13—C14—C9120.06 (13)
C5—C4—H4108.9C13—C14—H14120.0
C9—C4—H4108.9C9—C14—H14120.0
C3—C4—H4108.9C11—O1—C16117.45 (13)
C15—O2—C10120.36 (10)C11—C12—C13119.93 (13)
C6—O4—C2117.52 (10)C11—C12—H12120.0
C15—C3—C4111.61 (11)C13—C12—H12120.0
C15—C3—C2111.33 (11)C14—C13—C12121.25 (14)
C4—C3—C2108.91 (10)C14—C13—H13119.4
C15—C3—H3108.3C12—C13—H13119.4
C4—C3—H3108.3O1—C16—C17107.20 (15)
C2—C3—H3108.3O1—C16—H16A110.3
C6—C5—C8119.19 (13)C17—C16—H16A110.3
C6—C5—C4120.79 (12)O1—C16—H16B110.3
C8—C5—C4120.02 (12)C17—C16—H16B110.3
C7—N1—C8124.76 (13)H16A—C16—H16B108.5
C7—N1—C18116.92 (14)O5—C7—N1122.64 (18)
C8—N1—C18118.10 (16)O5—C7—N2121.11 (18)
C10—C9—C14118.43 (12)N1—C7—N2116.25 (13)
C10—C9—C4118.03 (11)N1—C18—H18A109.5
C14—C9—C4123.51 (11)N1—C18—H18B109.5
C6—N2—C7121.19 (14)H18A—C18—H18B109.5
C6—N2—C19121.01 (15)N1—C18—H18C109.5
C7—N2—C19117.55 (14)H18A—C18—H18C109.5
O4—C2—C1106.06 (12)H18B—C18—H18C109.5
O4—C2—C3108.82 (10)C16—C17—H17A109.5
C1—C2—C3115.33 (13)C16—C17—H17B109.5
O4—C2—H2108.8H17A—C17—H17B109.5
C1—C2—H2108.8C16—C17—H17C109.5
C3—C2—H2108.8H17A—C17—H17C109.5
O4—C6—C5125.03 (13)H17B—C17—H17C109.5
O4—C6—N2112.57 (12)N2—C19—H19A109.5
C5—C6—N2122.39 (14)N2—C19—H19B109.5
O6—C8—N1120.23 (13)H19A—C19—H19B109.5
O6—C8—C5123.69 (13)N2—C19—H19C109.5
N1—C8—C5116.08 (13)H19A—C19—H19C109.5
O3—C15—O2117.79 (13)H19B—C19—H19C109.5
O3—C15—C3124.45 (13)C2—C1—H1A109.5
O2—C15—C3117.76 (11)C2—C1—H1C109.5
C9—C10—O2122.01 (12)H1A—C1—H1C109.5
C9—C10—C11122.15 (13)C2—C1—H1B109.5
O2—C10—C11115.83 (12)H1A—C1—H1B109.5
O1—C11—C12125.50 (13)H1C—C1—H1B109.5
C5—C4—C3—C15−175.85 (10)C4—C5—C8—N1179.44 (11)
C9—C4—C3—C15−52.37 (13)C10—O2—C15—O3178.55 (12)
C5—C4—C3—C2−52.53 (13)C10—O2—C15—C3−1.65 (18)
C9—C4—C3—C270.95 (13)C4—C3—C15—O3−141.90 (14)
C9—C4—C5—C6−96.05 (15)C2—C3—C15—O396.17 (16)
C3—C4—C5—C624.06 (16)C4—C3—C15—O238.32 (15)
C9—C4—C5—C884.60 (14)C2—C3—C15—O2−83.61 (14)
C3—C4—C5—C8−155.30 (11)C14—C9—C10—O2178.53 (12)
C5—C4—C9—C10155.04 (11)C4—C9—C10—O20.45 (18)
C3—C4—C9—C1034.75 (15)C14—C9—C10—C11−2.3 (2)
C5—C4—C9—C14−22.92 (17)C4—C9—C10—C11179.67 (12)
C3—C4—C9—C14−143.22 (12)C15—O2—C10—C9−19.32 (19)
C6—O4—C2—C1−165.09 (12)C15—O2—C10—C11161.42 (12)
C6—O4—C2—C3−40.44 (15)C9—C10—C11—O1−179.05 (12)
C15—C3—C2—O4−174.74 (11)O2—C10—C11—O10.21 (18)
C4—C3—C2—O461.77 (13)C9—C10—C11—C121.0 (2)
C15—C3—C2—C1−55.75 (16)O2—C10—C11—C12−179.70 (13)
C4—C3—C2—C1−179.23 (12)C10—C9—C14—C131.5 (2)
C2—O4—C6—C510.88 (19)C4—C9—C14—C13179.43 (13)
C2—O4—C6—N2−170.26 (11)C12—C11—O1—C16−8.5 (2)
C8—C5—C6—O4177.18 (12)C10—C11—O1—C16171.64 (13)
C4—C5—C6—O4−2.2 (2)O1—C11—C12—C13−178.93 (14)
C8—C5—C6—N2−1.6 (2)C10—C11—C12—C131.0 (2)
C4—C5—C6—N2179.07 (12)C9—C14—C13—C120.5 (2)
C7—N2—C6—O4−178.82 (13)C11—C12—C13—C14−1.7 (2)
C19—N2—C6—O47.1 (2)C11—O1—C16—C17−170.40 (14)
C7—N2—C6—C50.1 (2)C8—N1—C7—O5175.43 (15)
C19—N2—C6—C5−174.03 (15)C18—N1—C7—O50.9 (2)
C7—N1—C8—O6−177.10 (14)C8—N1—C7—N2−4.5 (2)
C18—N1—C8—O6−2.6 (2)C18—N1—C7—N2−179.10 (14)
C7—N1—C8—C53.1 (2)C6—N2—C7—O5−177.11 (15)
C18—N1—C8—C5177.62 (13)C19—N2—C7—O5−2.8 (2)
C6—C5—C8—O6−179.70 (13)C6—N2—C7—N12.9 (2)
C4—C5—C8—O6−0.3 (2)C19—N2—C7—N1177.15 (15)
C6—C5—C8—N10.07 (19)
D—H···AD—HH···AD···AD—H···A
C2—H2···O6i0.982.403.1480 (17)132
C18—H18C···O3ii0.962.453.252 (2)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯O6i 0.982.403.1480 (17)132
C18—H18C⋯O3ii 0.962.453.252 (2)140

Symmetry codes: (i) ; (ii) .

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6.  Structure validation in chemical crystallography.

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