| Literature DB >> 22412673 |
Michaela Pojarová, Michal Dušek, Zdeňka Sedláková, Emanuel Makrlík.
Abstract
In the title compound, C(25)H(22)Cl(2)N(2)O(4)·CH(3)OH, the macrocyclic mol-ecule adopts a slightly distorted C(2)-symmetric conformation. The macrocyclic mol-ecules are linked via N-H⋯O hydrogen bonds between theEntities:
Year: 2012 PMID: 22412673 PMCID: PMC3297870 DOI: 10.1107/S1600536812007052
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H22Cl2N2O4·CH4O | |
| Melting point = 316–318 K | |
| Orthorhombic, | Cu |
| Hall symbol: -P 2ac 2ab | Cell parameters from 6415 reflections |
| θ = 3.3–67.1° | |
| µ = 2.78 mm−1 | |
| Prism, colourless | |
| 0.30 × 0.11 × 0.08 mm | |
| Oxford Diffraction Xcalibur A Gemini Ultra diffractometer | 4099 independent reflections |
| Radiation source: Enhance Ultra (Cu) X-ray Source | 3364 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.3784 pixels mm-1 | θmax = 65.1°, θmin = 3.3° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 42959 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4099 reflections | (Δ/σ)max = 0.002 |
| 326 parameters | Δρmax = 0.20 e Å−3 |
| 4 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cl1 | 1.11069 (2) | 0.02416 (7) | 0.213524 (18) | 0.03911 (14) | |
| Cl2 | 0.84287 (2) | −0.21013 (7) | 0.147714 (18) | 0.03856 (14) | |
| O1 | 0.70542 (6) | 0.38705 (18) | 0.40933 (5) | 0.0367 (3) | |
| O2 | 0.80594 (5) | 0.19883 (17) | 0.32491 (5) | 0.0305 (3) | |
| O3 | 0.96571 (6) | −0.16498 (18) | 0.38954 (5) | 0.0322 (3) | |
| O4 | 0.98144 (6) | −0.1787 (2) | 0.52219 (5) | 0.0406 (4) | |
| N1 | 0.80833 (7) | 0.38887 (19) | 0.40351 (6) | 0.0277 (3) | |
| H1N2 | 0.8870 | −0.1436 | 0.4391 | 0.033* | |
| N2 | 0.89913 (7) | −0.14110 (19) | 0.47251 (5) | 0.0262 (3) | |
| H1N1 | 0.8439 | 0.3425 | 0.3862 | 0.031* | |
| C1 | 0.81828 (9) | 0.4614 (2) | 0.45255 (7) | 0.0315 (4) | |
| H1A | 0.7853 | 0.5366 | 0.4597 | 0.038* | |
| H1B | 0.8557 | 0.5239 | 0.4517 | 0.038* | |
| C2 | 0.75257 (8) | 0.3497 (2) | 0.38745 (7) | 0.0266 (4) | |
| C3 | 0.74788 (8) | 0.2590 (2) | 0.33841 (7) | 0.0265 (4) | |
| H3A | 0.7195 | 0.1690 | 0.3417 | 0.032* | |
| H3B | 0.7329 | 0.3318 | 0.3125 | 0.032* | |
| C4 | 0.81162 (8) | 0.1097 (2) | 0.28177 (6) | 0.0240 (4) | |
| C5 | 0.76696 (8) | 0.0977 (2) | 0.24538 (7) | 0.0267 (4) | |
| H5 | 0.7306 | 0.1547 | 0.2489 | 0.032* | |
| C6 | 0.77682 (8) | 0.0000 (2) | 0.20357 (7) | 0.0289 (4) | |
| H6 | 0.7472 | −0.0093 | 0.1788 | 0.035* | |
| C7 | 0.83113 (8) | −0.0828 (2) | 0.19935 (7) | 0.0276 (4) | |
| C8 | 0.87611 (8) | −0.0703 (2) | 0.23554 (7) | 0.0255 (4) | |
| H8 | 0.9124 | −0.1273 | 0.2317 | 0.031* | |
| C9 | 0.86718 (8) | 0.0266 (2) | 0.27735 (7) | 0.0242 (4) | |
| C10 | 0.91217 (8) | 0.0476 (3) | 0.31990 (7) | 0.0338 (5) | |
| H10A | 0.9167 | 0.1636 | 0.3263 | 0.041* | |
| H10B | 0.8947 | −0.0011 | 0.3498 | 0.041* | |
| C11 | 0.97467 (8) | −0.0239 (2) | 0.31231 (7) | 0.0283 (4) | |
| C12 | 1.00962 (8) | 0.0216 (2) | 0.27119 (7) | 0.0296 (4) | |
| H12 | 0.9936 | 0.0927 | 0.2474 | 0.035* | |
| C13 | 1.06813 (8) | −0.0383 (2) | 0.26540 (7) | 0.0298 (4) | |
| C14 | 1.09288 (8) | −0.1440 (3) | 0.29985 (7) | 0.0317 (4) | |
| H14 | 1.1320 | −0.1849 | 0.2953 | 0.038* | |
| C15 | 1.05893 (9) | −0.1890 (3) | 0.34134 (7) | 0.0313 (4) | |
| H15 | 1.0753 | −0.2604 | 0.3649 | 0.038* | |
| C16 | 1.00041 (8) | −0.1277 (2) | 0.34793 (7) | 0.0275 (4) | |
| C17 | 0.99810 (9) | −0.1964 (3) | 0.43499 (7) | 0.0345 (5) | |
| H17A | 1.0330 | −0.1243 | 0.4370 | 0.041* | |
| H17B | 1.0128 | −0.3081 | 0.4348 | 0.041* | |
| C18 | 0.95804 (9) | −0.1705 (2) | 0.48030 (7) | 0.0291 (4) | |
| C19 | 0.85686 (9) | −0.1157 (2) | 0.51386 (7) | 0.0287 (4) | |
| H19A | 0.8741 | −0.1632 | 0.5440 | 0.034* | |
| H19B | 0.8194 | −0.1736 | 0.5066 | 0.034* | |
| C20 | 0.84194 (8) | 0.0621 (2) | 0.52404 (7) | 0.0261 (4) | |
| C21 | 0.82821 (8) | 0.1118 (3) | 0.57256 (7) | 0.0307 (4) | |
| H21 | 0.8297 | 0.0368 | 0.5987 | 0.037* | |
| C22 | 0.81235 (9) | 0.2726 (3) | 0.58206 (7) | 0.0350 (5) | |
| H22 | 0.8037 | 0.3052 | 0.6147 | 0.042* | |
| C23 | 0.80922 (8) | 0.3850 (3) | 0.54350 (8) | 0.0321 (4) | |
| H23 | 0.7985 | 0.4927 | 0.5503 | 0.039* | |
| C24 | 0.82213 (8) | 0.3373 (2) | 0.49450 (7) | 0.0271 (4) | |
| C25 | 0.83856 (8) | 0.1760 (2) | 0.48543 (7) | 0.0264 (4) | |
| H25 | 0.8475 | 0.1435 | 0.4528 | 0.032* | |
| O5 | 0.94522 (11) | 0.3414 (4) | 0.40875 (11) | 0.0418 (7) | 0.90 |
| H1O5 | 0.9545 | 0.2931 | 0.4346 | 0.050* | 0.90 |
| C26 | 0.99892 (15) | 0.3791 (5) | 0.38117 (9) | 0.0415 (7) | 0.90 |
| H26A | 0.9904 | 0.4652 | 0.3578 | 0.050* | 0.90 |
| H26B | 1.0123 | 0.2838 | 0.3633 | 0.050* | 0.90 |
| H26C | 1.0303 | 0.4138 | 0.4039 | 0.050* | 0.90 |
| O5A | 0.9587 (14) | 0.374 (5) | 0.4090 (12) | 0.0418 (7) | 0.10 |
| H2O5 | 0.9634 | 0.2905 | 0.4254 | 0.050* | 0.10 |
| C26A | 0.9961 (18) | 0.367 (6) | 0.3651 (11) | 0.0415 (7) | 0.10 |
| H26D | 0.9888 | 0.4625 | 0.3449 | 0.050* | 0.10 |
| H26E | 0.9863 | 0.2711 | 0.3462 | 0.050* | 0.10 |
| H26F | 1.0381 | 0.3642 | 0.3748 | 0.050* | 0.10 |
| Cl1 | 0.0270 (2) | 0.0524 (3) | 0.0380 (3) | −0.0081 (2) | 0.00832 (19) | −0.0091 (2) |
| Cl2 | 0.0337 (3) | 0.0480 (3) | 0.0339 (3) | −0.0041 (2) | 0.00026 (19) | −0.0116 (2) |
| O1 | 0.0250 (7) | 0.0434 (9) | 0.0417 (8) | 0.0047 (6) | 0.0079 (6) | −0.0067 (7) |
| O2 | 0.0183 (6) | 0.0437 (8) | 0.0294 (7) | 0.0064 (6) | 0.0010 (5) | −0.0059 (6) |
| O3 | 0.0221 (6) | 0.0499 (9) | 0.0245 (6) | 0.0021 (6) | −0.0020 (5) | −0.0013 (6) |
| O4 | 0.0343 (8) | 0.0595 (10) | 0.0279 (7) | 0.0096 (7) | −0.0066 (6) | 0.0019 (7) |
| N1 | 0.0236 (8) | 0.0284 (8) | 0.0311 (8) | 0.0029 (7) | 0.0014 (6) | 0.0015 (7) |
| N2 | 0.0254 (8) | 0.0302 (9) | 0.0230 (7) | 0.0009 (7) | −0.0009 (6) | −0.0013 (6) |
| C1 | 0.0290 (10) | 0.0283 (10) | 0.0372 (11) | 0.0017 (8) | −0.0014 (8) | −0.0044 (8) |
| C2 | 0.0242 (9) | 0.0240 (10) | 0.0315 (9) | 0.0042 (8) | 0.0035 (8) | 0.0059 (8) |
| C3 | 0.0185 (8) | 0.0298 (10) | 0.0313 (9) | 0.0057 (8) | 0.0024 (7) | 0.0050 (8) |
| C4 | 0.0216 (9) | 0.0264 (9) | 0.0241 (9) | −0.0010 (8) | 0.0028 (7) | 0.0051 (7) |
| C5 | 0.0184 (9) | 0.0314 (10) | 0.0302 (10) | 0.0002 (8) | 0.0002 (7) | 0.0092 (8) |
| C6 | 0.0232 (9) | 0.0359 (11) | 0.0276 (10) | −0.0049 (8) | −0.0033 (7) | 0.0064 (8) |
| C7 | 0.0261 (9) | 0.0306 (10) | 0.0260 (9) | −0.0053 (8) | 0.0020 (7) | 0.0013 (8) |
| C8 | 0.0208 (9) | 0.0279 (10) | 0.0277 (9) | −0.0002 (8) | 0.0029 (7) | 0.0043 (8) |
| C9 | 0.0194 (8) | 0.0284 (10) | 0.0247 (9) | −0.0012 (8) | 0.0021 (7) | 0.0058 (7) |
| C10 | 0.0218 (9) | 0.0515 (13) | 0.0280 (10) | 0.0097 (9) | −0.0010 (8) | −0.0040 (9) |
| C11 | 0.0196 (9) | 0.0398 (11) | 0.0256 (9) | 0.0026 (8) | −0.0024 (7) | −0.0082 (8) |
| C12 | 0.0233 (9) | 0.0364 (11) | 0.0290 (9) | 0.0024 (8) | −0.0018 (8) | −0.0056 (8) |
| C13 | 0.0212 (9) | 0.0383 (11) | 0.0300 (10) | −0.0042 (8) | 0.0019 (7) | −0.0109 (8) |
| C14 | 0.0186 (9) | 0.0406 (12) | 0.0359 (10) | 0.0022 (8) | −0.0019 (8) | −0.0131 (9) |
| C15 | 0.0248 (10) | 0.0374 (11) | 0.0317 (10) | 0.0055 (8) | −0.0048 (8) | −0.0076 (8) |
| C16 | 0.0207 (9) | 0.0356 (11) | 0.0262 (9) | −0.0002 (8) | −0.0017 (7) | −0.0074 (8) |
| C17 | 0.0294 (10) | 0.0463 (13) | 0.0278 (10) | 0.0091 (9) | −0.0037 (8) | −0.0014 (9) |
| C18 | 0.0291 (10) | 0.0313 (11) | 0.0271 (10) | 0.0028 (8) | −0.0027 (8) | 0.0004 (8) |
| C19 | 0.0264 (9) | 0.0326 (11) | 0.0270 (9) | −0.0017 (8) | 0.0027 (7) | 0.0020 (8) |
| C20 | 0.0177 (8) | 0.0335 (10) | 0.0271 (9) | −0.0020 (8) | −0.0015 (7) | −0.0035 (8) |
| C21 | 0.0236 (9) | 0.0434 (12) | 0.0251 (9) | −0.0008 (9) | −0.0002 (7) | 0.0004 (8) |
| C22 | 0.0286 (10) | 0.0494 (13) | 0.0271 (10) | 0.0025 (9) | 0.0009 (8) | −0.0109 (9) |
| C23 | 0.0235 (9) | 0.0346 (11) | 0.0383 (11) | 0.0034 (9) | −0.0017 (8) | −0.0098 (9) |
| C24 | 0.0176 (9) | 0.0334 (11) | 0.0301 (10) | −0.0008 (8) | −0.0022 (7) | −0.0048 (8) |
| C25 | 0.0215 (9) | 0.0334 (11) | 0.0245 (9) | −0.0007 (8) | 0.0011 (7) | −0.0047 (8) |
| O5 | 0.0243 (15) | 0.0620 (19) | 0.0390 (8) | 0.0036 (10) | −0.0010 (10) | 0.0116 (10) |
| C26 | 0.0367 (13) | 0.0549 (17) | 0.0330 (17) | −0.0057 (12) | −0.0024 (16) | 0.0023 (19) |
| O5A | 0.0243 (15) | 0.0620 (19) | 0.0390 (8) | 0.0036 (10) | −0.0010 (10) | 0.0116 (10) |
| C26A | 0.0367 (13) | 0.0549 (17) | 0.0330 (17) | −0.0057 (12) | −0.0024 (16) | 0.0023 (19) |
| Cl1—C13 | 1.7470 (19) | C11—C16 | 1.395 (3) |
| Cl2—C7 | 1.7466 (19) | C12—C13 | 1.386 (3) |
| O1—C2 | 1.229 (2) | C12—H12 | 0.9300 |
| O2—C4 | 1.368 (2) | C13—C14 | 1.375 (3) |
| O2—C3 | 1.415 (2) | C14—C15 | 1.385 (3) |
| O3—C16 | 1.381 (2) | C14—H14 | 0.9300 |
| O3—C17 | 1.430 (2) | C15—C16 | 1.392 (3) |
| O4—C18 | 1.232 (2) | C15—H15 | 0.9300 |
| N1—C2 | 1.338 (2) | C17—C18 | 1.511 (3) |
| N1—C1 | 1.453 (2) | C17—H17A | 0.9700 |
| N1—H1N1 | 0.9840 | C17—H17B | 0.9700 |
| N2—C18 | 1.334 (2) | C19—C20 | 1.517 (3) |
| N2—C19 | 1.458 (2) | C19—H19A | 0.9700 |
| N2—H1N2 | 0.9295 | C19—H19B | 0.9700 |
| C1—C24 | 1.514 (3) | C20—C21 | 1.390 (3) |
| C1—H1A | 0.9700 | C20—C25 | 1.391 (3) |
| C1—H1B | 0.9700 | C21—C22 | 1.385 (3) |
| C2—C3 | 1.507 (3) | C21—H21 | 0.9300 |
| C3—H3A | 0.9700 | C22—C23 | 1.382 (3) |
| C3—H3B | 0.9700 | C22—H22 | 0.9300 |
| C4—C5 | 1.384 (3) | C23—C24 | 1.394 (3) |
| C4—C9 | 1.404 (3) | C23—H23 | 0.9300 |
| C5—C6 | 1.389 (3) | C24—C25 | 1.391 (3) |
| C5—H5 | 0.9300 | C25—H25 | 0.9300 |
| C6—C7 | 1.378 (3) | O5—C26 | 1.425 (3) |
| C6—H6 | 0.9300 | O5—H1O5 | 0.8200 |
| C7—C8 | 1.386 (3) | C26—H26A | 0.9600 |
| C8—C9 | 1.383 (3) | C26—H26B | 0.9600 |
| C8—H8 | 0.9300 | C26—H26C | 0.9600 |
| C9—C10 | 1.516 (3) | O5A—C26A | 1.430 (19) |
| C10—C11 | 1.508 (3) | O5A—H2O5 | 0.8200 |
| C10—H10A | 0.9700 | C26A—H26D | 0.9600 |
| C10—H10B | 0.9700 | C26A—H26E | 0.9600 |
| C11—C12 | 1.390 (3) | C26A—H26F | 0.9600 |
| C4—O2—C3 | 118.82 (14) | C14—C13—C12 | 121.06 (18) |
| C16—O3—C17 | 116.49 (14) | C14—C13—Cl1 | 120.10 (14) |
| C2—N1—C1 | 121.63 (16) | C12—C13—Cl1 | 118.83 (16) |
| C2—N1—H1N1 | 119.0 | C13—C14—C15 | 119.22 (17) |
| C1—N1—H1N1 | 117.4 | C13—C14—H14 | 120.4 |
| C18—N2—C19 | 121.82 (15) | C15—C14—H14 | 120.4 |
| C18—N2—H1N2 | 115.1 | C14—C15—C16 | 120.21 (19) |
| C19—N2—H1N2 | 123.0 | C14—C15—H15 | 119.9 |
| N1—C1—C24 | 113.56 (16) | C16—C15—H15 | 119.9 |
| N1—C1—H1A | 108.9 | O3—C16—C15 | 122.18 (17) |
| C24—C1—H1A | 108.9 | O3—C16—C11 | 117.25 (16) |
| N1—C1—H1B | 108.9 | C15—C16—C11 | 120.58 (18) |
| C24—C1—H1B | 108.9 | O3—C17—C18 | 111.27 (15) |
| H1A—C1—H1B | 107.7 | O3—C17—H17A | 109.4 |
| O1—C2—N1 | 124.17 (18) | C18—C17—H17A | 109.4 |
| O1—C2—C3 | 118.49 (17) | O3—C17—H17B | 109.4 |
| N1—C2—C3 | 117.30 (16) | C18—C17—H17B | 109.4 |
| O2—C3—C2 | 109.29 (15) | H17A—C17—H17B | 108.0 |
| O2—C3—H3A | 109.8 | O4—C18—N2 | 123.83 (18) |
| C2—C3—H3A | 109.8 | O4—C18—C17 | 118.33 (17) |
| O2—C3—H3B | 109.8 | N2—C18—C17 | 117.84 (16) |
| C2—C3—H3B | 109.8 | N2—C19—C20 | 114.22 (15) |
| H3A—C3—H3B | 108.3 | N2—C19—H19A | 108.7 |
| O2—C4—C5 | 124.25 (16) | C20—C19—H19A | 108.7 |
| O2—C4—C9 | 114.12 (15) | N2—C19—H19B | 108.7 |
| C5—C4—C9 | 121.62 (17) | C20—C19—H19B | 108.7 |
| C4—C5—C6 | 119.53 (17) | H19A—C19—H19B | 107.6 |
| C4—C5—H5 | 120.2 | C21—C20—C25 | 118.80 (18) |
| C6—C5—H5 | 120.2 | C21—C20—C19 | 119.64 (17) |
| C7—C6—C5 | 118.96 (17) | C25—C20—C19 | 121.47 (16) |
| C7—C6—H6 | 120.5 | C22—C21—C20 | 120.21 (19) |
| C5—C6—H6 | 120.5 | C22—C21—H21 | 119.9 |
| C6—C7—C8 | 121.69 (18) | C20—C21—H21 | 119.9 |
| C6—C7—Cl2 | 119.10 (14) | C23—C22—C21 | 120.62 (18) |
| C8—C7—Cl2 | 119.19 (15) | C23—C22—H22 | 119.7 |
| C9—C8—C7 | 120.19 (17) | C21—C22—H22 | 119.7 |
| C9—C8—H8 | 119.9 | C22—C23—C24 | 120.08 (19) |
| C7—C8—H8 | 119.9 | C22—C23—H23 | 120.0 |
| C8—C9—C4 | 118.01 (16) | C24—C23—H23 | 120.0 |
| C8—C9—C10 | 125.23 (16) | C25—C24—C23 | 118.84 (18) |
| C4—C9—C10 | 116.75 (16) | C25—C24—C1 | 121.56 (17) |
| C11—C10—C9 | 116.76 (16) | C23—C24—C1 | 119.60 (18) |
| C11—C10—H10A | 108.1 | C24—C25—C20 | 121.43 (17) |
| C9—C10—H10A | 108.1 | C24—C25—H25 | 119.3 |
| C11—C10—H10B | 108.1 | C20—C25—H25 | 119.3 |
| C9—C10—H10B | 108.1 | C26—O5—H1O5 | 109.5 |
| H10A—C10—H10B | 107.3 | C26A—O5A—H2O5 | 109.5 |
| C12—C11—C16 | 118.45 (17) | O5A—C26A—H26D | 109.5 |
| C12—C11—C10 | 120.39 (18) | O5A—C26A—H26E | 109.5 |
| C16—C11—C10 | 121.00 (17) | H26D—C26A—H26E | 109.5 |
| C13—C12—C11 | 120.43 (19) | O5A—C26A—H26F | 109.5 |
| C13—C12—H12 | 119.8 | H26D—C26A—H26F | 109.5 |
| C11—C12—H12 | 119.8 | H26E—C26A—H26F | 109.5 |
| H··· | ||||
| N1—H1 | 0.98 | 2.31 | 3.039 (3) | 130 |
| N2—H1 | 0.93 | 2.20 | 2.860 (2) | 128 |
| O5—H1 | 0.82 | 2.05 | 2.789 (3) | 150 |
| C26 | 0.96 | 2.74 | 3.616 (3) | 149 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1N1⋯O5 | 0.98 | 2.31 | 3.039 (3) | 130 |
| N2—H1N2⋯O1i | 0.93 | 2.20 | 2.860 (2) | 128 |
| O5—H1O5⋯O4ii | 0.82 | 2.05 | 2.789 (3) | 150 |
| C26 | 0.96 | 2.74 | 3.616 (3) | 149 |
Symmetry codes: (i) ; (ii) ; (iii) .