| Literature DB >> 23424544 |
T Mohandas1, K Jayamoorthy, J Jayabharathi, P Sakthivel.
Abstract
In the title compound, C(20)H(16)N(2)O, the 1H-benzimidazole ring forms dihedral angles of 48.00 (6) and 64.48 (6)°, respectively with the benzene and phenyl rings, which are inclined to one another by 58.51 (7)°. In the crystal, weak C-H⋯π inter-actions are the only inter-molecular inter-actions present.Entities:
Year: 2013 PMID: 23424544 PMCID: PMC3569798 DOI: 10.1107/S1600536813001566
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H16N2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6267 reflections |
| θ = 2.8–31.8° | |
| µ = 0.08 mm−1 | |
| β = 108.909 (1)° | Block, colourless |
| 0.30 × 0.30 × 0.20 mm | |
| Bruker Kappa APEXII CCD diffractometer | 2728 independent reflections |
| Radiation source: fine-focus sealed tube | 2283 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 25.0°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 13787 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2728 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 0.11 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| C1 | 0.15098 (14) | 0.1529 (3) | 0.11631 (12) | 0.0752 (5) | |
| H1A | 0.1582 | 0.0917 | 0.1642 | 0.113* | |
| H1B | 0.0756 | 0.1323 | 0.0803 | 0.113* | |
| H1C | 0.1629 | 0.2819 | 0.1256 | 0.113* | |
| C2 | 0.34701 (11) | 0.10389 (19) | 0.12724 (8) | 0.0448 (3) | |
| C3 | 0.42477 (12) | 0.0429 (2) | 0.09213 (8) | 0.0486 (4) | |
| H3 | 0.3983 | −0.0131 | 0.0438 | 0.058* | |
| C4 | 0.54039 (12) | 0.0648 (2) | 0.12827 (7) | 0.0450 (3) | |
| H4 | 0.5916 | 0.0255 | 0.1037 | 0.054* | |
| C5 | 0.58222 (11) | 0.14511 (18) | 0.20131 (7) | 0.0385 (3) | |
| C6 | 0.50382 (12) | 0.20005 (19) | 0.23664 (8) | 0.0443 (3) | |
| H6 | 0.5302 | 0.2506 | 0.2860 | 0.053* | |
| C7 | 0.38733 (12) | 0.1813 (2) | 0.20007 (8) | 0.0477 (3) | |
| H7 | 0.3360 | 0.2209 | 0.2245 | 0.057* | |
| C8 | 0.70531 (11) | 0.17362 (18) | 0.24035 (7) | 0.0375 (3) | |
| C9 | 0.87357 (11) | 0.18293 (18) | 0.32458 (7) | 0.0404 (3) | |
| C10 | 0.96985 (13) | 0.1720 (2) | 0.39081 (8) | 0.0513 (4) | |
| H10 | 0.9646 | 0.1228 | 0.4366 | 0.062* | |
| C11 | 1.07235 (13) | 0.2354 (2) | 0.38684 (9) | 0.0557 (4) | |
| H11 | 1.1373 | 0.2294 | 0.4306 | 0.067* | |
| C12 | 1.08135 (13) | 0.3089 (2) | 0.31854 (9) | 0.0546 (4) | |
| H12 | 1.1523 | 0.3504 | 0.3178 | 0.066* | |
| C13 | 0.98813 (12) | 0.3218 (2) | 0.25235 (8) | 0.0468 (3) | |
| H13 | 0.9940 | 0.3716 | 0.2069 | 0.056* | |
| C14 | 0.88502 (11) | 0.25677 (18) | 0.25688 (7) | 0.0377 (3) | |
| C15 | 0.74297 (10) | 0.32860 (18) | 0.12689 (7) | 0.0365 (3) | |
| C16 | 0.78572 (13) | 0.2560 (2) | 0.07224 (7) | 0.0478 (4) | |
| H16 | 0.8363 | 0.1576 | 0.0845 | 0.057* | |
| C17 | 0.75247 (15) | 0.3317 (2) | −0.00127 (8) | 0.0589 (4) | |
| H17 | 0.7807 | 0.2833 | −0.0387 | 0.071* | |
| C18 | 0.67873 (15) | 0.4765 (3) | −0.01939 (8) | 0.0626 (5) | |
| H18 | 0.6565 | 0.5259 | −0.0690 | 0.075* | |
| C19 | 0.63744 (13) | 0.5492 (2) | 0.03560 (9) | 0.0601 (4) | |
| H19 | 0.5877 | 0.6488 | 0.0233 | 0.072* | |
| C20 | 0.66926 (11) | 0.4754 (2) | 0.10932 (8) | 0.0479 (4) | |
| H20 | 0.6411 | 0.5245 | 0.1466 | 0.057* | |
| O1 | 0.23425 (8) | 0.08312 (16) | 0.08496 (6) | 0.0636 (3) | |
| N1 | 0.77587 (9) | 0.24986 (15) | 0.20301 (5) | 0.0375 (3) | |
| N2 | 0.76084 (9) | 0.13147 (17) | 0.31277 (6) | 0.0438 (3) |
| O1 | 0.0447 (6) | 0.0665 (8) | 0.0712 (7) | −0.0034 (5) | 0.0074 (5) | −0.0040 (6) |
| N1 | 0.0387 (6) | 0.0421 (6) | 0.0310 (5) | −0.0019 (5) | 0.0105 (4) | 0.0038 (4) |
| N2 | 0.0489 (7) | 0.0512 (7) | 0.0316 (5) | 0.0002 (5) | 0.0134 (5) | 0.0035 (5) |
| C1 | 0.0459 (9) | 0.0666 (12) | 0.1100 (15) | 0.0005 (8) | 0.0207 (9) | −0.0018 (11) |
| C2 | 0.0426 (7) | 0.0394 (8) | 0.0483 (8) | −0.0036 (6) | 0.0091 (6) | 0.0057 (6) |
| C3 | 0.0548 (8) | 0.0520 (9) | 0.0370 (7) | −0.0121 (7) | 0.0121 (6) | −0.0045 (6) |
| C4 | 0.0504 (8) | 0.0507 (9) | 0.0382 (7) | −0.0071 (7) | 0.0203 (6) | −0.0039 (6) |
| C5 | 0.0442 (7) | 0.0388 (7) | 0.0336 (6) | −0.0036 (6) | 0.0142 (5) | 0.0030 (5) |
| C6 | 0.0505 (8) | 0.0461 (8) | 0.0377 (7) | −0.0018 (6) | 0.0164 (6) | −0.0038 (6) |
| C7 | 0.0478 (8) | 0.0461 (8) | 0.0532 (8) | 0.0027 (7) | 0.0220 (7) | −0.0007 (7) |
| C8 | 0.0443 (7) | 0.0389 (7) | 0.0320 (6) | −0.0010 (6) | 0.0160 (5) | 0.0002 (5) |
| C9 | 0.0468 (8) | 0.0394 (8) | 0.0333 (6) | 0.0038 (6) | 0.0105 (6) | −0.0006 (5) |
| C10 | 0.0566 (9) | 0.0547 (9) | 0.0376 (7) | 0.0092 (7) | 0.0080 (6) | 0.0033 (6) |
| C11 | 0.0471 (8) | 0.0577 (10) | 0.0498 (8) | 0.0081 (7) | −0.0015 (7) | −0.0036 (7) |
| C12 | 0.0417 (8) | 0.0514 (9) | 0.0656 (10) | −0.0010 (7) | 0.0103 (7) | −0.0015 (8) |
| C13 | 0.0460 (8) | 0.0442 (8) | 0.0496 (8) | −0.0006 (6) | 0.0147 (6) | 0.0032 (6) |
| C14 | 0.0405 (7) | 0.0351 (7) | 0.0360 (6) | 0.0029 (6) | 0.0103 (5) | 0.0005 (5) |
| C15 | 0.0380 (7) | 0.0403 (7) | 0.0301 (6) | −0.0067 (6) | 0.0095 (5) | 0.0032 (5) |
| C16 | 0.0587 (9) | 0.0471 (9) | 0.0419 (7) | −0.0050 (7) | 0.0225 (7) | 0.0000 (6) |
| C17 | 0.0781 (11) | 0.0663 (11) | 0.0376 (8) | −0.0233 (9) | 0.0260 (7) | −0.0047 (7) |
| C18 | 0.0695 (10) | 0.0707 (12) | 0.0367 (8) | −0.0261 (9) | 0.0024 (7) | 0.0136 (8) |
| C19 | 0.0506 (9) | 0.0592 (10) | 0.0594 (9) | −0.0021 (8) | 0.0024 (7) | 0.0211 (8) |
| C20 | 0.0455 (8) | 0.0510 (9) | 0.0461 (7) | 0.0003 (7) | 0.0136 (6) | 0.0050 (7) |
| O1—C1 | 1.421 (2) | C15—C20 | 1.374 (2) |
| O1—C2 | 1.3616 (18) | C16—C17 | 1.3842 (19) |
| N1—C8 | 1.3835 (17) | C17—C18 | 1.363 (3) |
| N1—C14 | 1.3859 (17) | C18—C19 | 1.371 (2) |
| N1—C15 | 1.4349 (15) | C19—C20 | 1.383 (2) |
| N2—C8 | 1.3126 (16) | C1—H1A | 0.9599 |
| N2—C9 | 1.3868 (18) | C1—H1B | 0.9599 |
| C2—C3 | 1.387 (2) | C1—H1C | 0.9600 |
| C2—C7 | 1.380 (2) | C3—H3 | 0.9301 |
| C3—C4 | 1.371 (2) | C4—H4 | 0.9299 |
| C4—C5 | 1.3930 (18) | C6—H6 | 0.9300 |
| C5—C6 | 1.383 (2) | C7—H7 | 0.9301 |
| C5—C8 | 1.4666 (19) | C10—H10 | 0.9301 |
| C6—C7 | 1.380 (2) | C11—H11 | 0.9299 |
| C9—C10 | 1.395 (2) | C12—H12 | 0.9302 |
| C9—C14 | 1.3962 (18) | C13—H13 | 0.9301 |
| C10—C11 | 1.369 (2) | C16—H16 | 0.9298 |
| C11—C12 | 1.394 (2) | C17—H17 | 0.9299 |
| C12—C13 | 1.374 (2) | C18—H18 | 0.9301 |
| C13—C14 | 1.384 (2) | C19—H19 | 0.9297 |
| C15—C16 | 1.3759 (19) | C20—H20 | 0.9301 |
| C1—O1—C2 | 117.99 (13) | C18—C19—C20 | 120.33 (15) |
| C8—N1—C14 | 106.60 (10) | C15—C20—C19 | 119.28 (13) |
| C8—N1—C15 | 127.76 (11) | O1—C1—H1A | 109.47 |
| C14—N1—C15 | 125.22 (11) | O1—C1—H1B | 109.47 |
| C8—N2—C9 | 105.19 (11) | O1—C1—H1C | 109.47 |
| O1—C2—C3 | 115.69 (12) | H1A—C1—H1B | 109.48 |
| O1—C2—C7 | 125.03 (13) | H1A—C1—H1C | 109.47 |
| C3—C2—C7 | 119.28 (13) | H1B—C1—H1C | 109.47 |
| C2—C3—C4 | 120.41 (13) | C2—C3—H3 | 119.80 |
| C3—C4—C5 | 120.90 (13) | C4—C3—H3 | 119.80 |
| C4—C5—C6 | 118.05 (13) | C3—C4—H4 | 119.56 |
| C4—C5—C8 | 121.88 (13) | C5—C4—H4 | 119.55 |
| C6—C5—C8 | 120.07 (12) | C5—C6—H6 | 119.33 |
| C5—C6—C7 | 121.34 (13) | C7—C6—H6 | 119.33 |
| C2—C7—C6 | 119.99 (14) | C2—C7—H7 | 120.01 |
| N1—C8—N2 | 112.60 (12) | C6—C7—H7 | 120.00 |
| N1—C8—C5 | 122.28 (11) | C9—C10—H10 | 120.82 |
| N2—C8—C5 | 125.12 (12) | C11—C10—H10 | 120.81 |
| N2—C9—C10 | 130.33 (12) | C10—C11—H11 | 119.36 |
| N2—C9—C14 | 110.52 (11) | C12—C11—H11 | 119.33 |
| C10—C9—C14 | 119.16 (13) | C11—C12—H12 | 119.14 |
| C9—C10—C11 | 118.37 (13) | C13—C12—H12 | 119.12 |
| C10—C11—C12 | 121.31 (15) | C12—C13—H13 | 121.75 |
| C11—C12—C13 | 121.75 (15) | C14—C13—H13 | 121.74 |
| C12—C13—C14 | 116.50 (13) | C15—C16—H16 | 120.49 |
| N1—C14—C9 | 105.09 (12) | C17—C16—H16 | 120.46 |
| N1—C14—C13 | 131.99 (12) | C16—C17—H17 | 119.69 |
| C9—C14—C13 | 122.91 (12) | C18—C17—H17 | 119.68 |
| N1—C15—C16 | 119.51 (12) | C17—C18—H18 | 120.02 |
| N1—C15—C20 | 119.77 (11) | C19—C18—H18 | 120.00 |
| C16—C15—C20 | 120.72 (12) | C18—C19—H19 | 119.83 |
| C15—C16—C17 | 119.05 (14) | C20—C19—H19 | 119.83 |
| C16—C17—C18 | 120.63 (15) | C15—C20—H20 | 120.35 |
| C17—C18—C19 | 119.98 (14) | C19—C20—H20 | 120.37 |
| C1—O1—C2—C3 | −176.41 (14) | C8—C5—C6—C7 | 177.52 (13) |
| C1—O1—C2—C7 | 2.8 (2) | C4—C5—C8—N1 | 47.29 (19) |
| C15—N1—C8—N2 | −173.11 (12) | C4—C5—C8—N2 | −132.70 (15) |
| C14—N1—C8—C5 | 179.73 (12) | C4—C5—C6—C7 | −1.9 (2) |
| C8—N1—C14—C9 | 0.04 (14) | C6—C5—C8—N2 | 47.9 (2) |
| C8—N1—C15—C16 | −120.52 (15) | C5—C6—C7—C2 | 1.0 (2) |
| C14—N1—C15—C16 | 67.90 (18) | C14—C9—C10—C11 | 0.3 (2) |
| C8—N1—C15—C20 | 59.48 (18) | C10—C9—C14—C13 | −0.6 (2) |
| C14—N1—C15—C20 | −112.11 (15) | N2—C9—C14—N1 | 0.19 (15) |
| C15—N1—C8—C5 | 6.9 (2) | C10—C9—C14—N1 | −179.49 (12) |
| C15—N1—C14—C9 | 173.11 (12) | N2—C9—C10—C11 | −179.29 (14) |
| C8—N1—C14—C13 | −178.74 (15) | N2—C9—C14—C13 | 179.12 (13) |
| C15—N1—C14—C13 | −5.7 (2) | C9—C10—C11—C12 | −0.2 (2) |
| C14—N1—C8—N2 | −0.28 (15) | C10—C11—C12—C13 | 0.3 (2) |
| C8—N2—C9—C10 | 179.28 (14) | C11—C12—C13—C14 | −0.5 (2) |
| C9—N2—C8—C5 | −179.62 (13) | C12—C13—C14—N1 | 179.23 (14) |
| C9—N2—C8—N1 | 0.39 (15) | C12—C13—C14—C9 | 0.6 (2) |
| C8—N2—C9—C14 | −0.35 (15) | N1—C15—C16—C17 | 179.30 (13) |
| C7—C2—C3—C4 | −2.1 (2) | C16—C15—C20—C19 | 0.5 (2) |
| C3—C2—C7—C6 | 1.0 (2) | C20—C15—C16—C17 | −0.7 (2) |
| O1—C2—C7—C6 | −178.14 (13) | N1—C15—C20—C19 | −179.51 (13) |
| O1—C2—C3—C4 | 177.13 (13) | C15—C16—C17—C18 | 0.2 (2) |
| C2—C3—C4—C5 | 1.2 (2) | C16—C17—C18—C19 | 0.5 (3) |
| C3—C4—C5—C8 | −178.60 (13) | C17—C18—C19—C20 | −0.7 (3) |
| C3—C4—C5—C6 | 0.8 (2) | C18—C19—C20—C15 | 0.2 (2) |
| C6—C5—C8—N1 | −132.09 (14) |
| H··· | ||||
| C6—H6··· | 0.93 | 2.86 | 3.5361 (15) | 130 |
| C13—H13··· | 0.93 | 2.83 | 3.4594 (16) | 126 |
Hydrogen-bond geometry (Å, °)
Cg2 and Cg3 are the centroids of the C2–C7 and C9–C14 phenyl rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C6—H6⋯ | 0.93 | 2.86 | 3.5361 (15) | 130 |
| C13—H13⋯ | 0.93 | 2.83 | 3.4594 (16) | 126 |
Symmetry codes: (i) ; (ii) .