Literature DB >> 23424518

1-Tosyl-4-[2-(trifluoro-meth-yl)benz-yl]piperazine.

S Sreenivasa1, H C Anitha, K E Manojkumar, J Tonannavar, Yenagi Jayashree, P A Suchetan, B S Palakshamurthy.   

Abstract

In the crystal structure of the title compound, C(19)H(21)F(3)N(2)O(2)S, the piperazine ring adopts a chair conformation. The dihedral angles between the mean plane of the piperazine ring and the tosyl and trifluoro-methyl-phenyl rings are 74.52 (3) and 68.30 (2)°, respectively. The sulfonamide N atom deviates from the plane defined by the three attached atoms by 0.327 (1) Å. The crystal structure is stabilized by weak C-H⋯π inter-actions.

Entities:  

Year:  2013        PMID: 23424518      PMCID: PMC3569772          DOI: 10.1107/S1600536813000317

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, characterization and biological activity of piperazine and its derivatives, see: Gan et al. (2009a ▶,b ▶)

Experimental

Crystal data

C19H21F3N2O2S M = 398.44 Triclinic, a = 9.5044 (3) Å b = 9.8389 (3) Å c = 12.1473 (4) Å α = 72.036 (1)° β = 77.024 (1)° γ = 62.384 (1)° V = 952.96 (5) Å3 Z = 2 Mo Kα radiation μ = 0.22 mm−1 T = 296 K 0.28 × 0.26 × 0.24 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.942, T max = 0.950 18514 measured reflections 3359 independent reflections 2981 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.119 S = 1.08 3359 reflections 245 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.53 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: APEX2 and SAINT-Plus (Bruker, 2009 ▶); data reduction: SAINT-Plus and XPREP (Bruker, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813000317/gk2548sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813000317/gk2548Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813000317/gk2548Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H21F3N2O2SF(000) = 416
Mr = 398.44prism
Triclinic, P1Dx = 1.389 Mg m3
Hall symbol: -P 1Melting point: 455 K
a = 9.5044 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.8389 (3) ÅCell parameters from 3359 reflections
c = 12.1473 (4) Åθ = 1.8–25.0°
α = 72.036 (1)°µ = 0.22 mm1
β = 77.024 (1)°T = 296 K
γ = 62.384 (1)°Prism, colourless
V = 952.96 (5) Å30.28 × 0.26 × 0.24 mm
Z = 2
Bruker APEXII diffractometer2981 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.023
Graphite monochromatorθmax = 25.0°, θmin = 1.8°
φ and ω scansh = −11→11
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→11
Tmin = 0.942, Tmax = 0.950l = −14→14
18514 measured reflections2981 standard reflections every 3359 reflections
3359 independent reflections intensity decay: 0.6%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0669P)2 + 0.2061P] where P = (Fo2 + 2Fc2)/3
3359 reflections(Δ/σ)max = 0.001
245 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.53 e Å3
0 constraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1−0.1973 (2)0.79085 (19)1.04506 (16)0.0524 (4)
H1−0.14130.80510.97230.063*
C2−0.3565 (2)0.8200 (2)1.0527 (2)0.0650 (5)
H2−0.40540.85120.98520.078*
C3−0.4417 (2)0.8030 (2)1.1589 (2)0.0692 (6)
H3−0.54940.82691.16370.083*
C4−0.3681 (2)0.7507 (2)1.25786 (19)0.0601 (5)
H4−0.42580.73821.33010.072*
C5−0.2083 (2)0.71618 (19)1.25148 (15)0.0484 (4)
C6−0.12093 (19)0.74094 (18)1.14417 (14)0.0446 (4)
C7−0.1307 (2)0.6477 (3)1.36242 (17)0.0662 (5)
C80.0483 (2)0.7240 (3)1.13458 (15)0.0570 (4)
H8A0.04650.80481.16540.068*
H8B0.11200.62211.18190.068*
C90.1988 (2)0.5868 (2)0.98362 (15)0.0533 (4)
H9A0.12080.54470.99570.064*
H9B0.28350.51241.03280.064*
C100.2667 (2)0.6058 (2)0.85784 (15)0.0512 (4)
H10A0.31900.50410.83780.061*
H10B0.18180.67560.80790.061*
C110.3078 (2)0.8246 (2)0.87272 (15)0.0549 (4)
H11A0.22310.89980.82370.066*
H11B0.38620.86580.86170.066*
C120.2407 (2)0.8003 (2)0.99864 (16)0.0572 (4)
H12A0.32650.72751.04730.069*
H12B0.19080.90001.02130.069*
C130.39911 (19)0.7588 (2)0.60451 (14)0.0494 (4)
C140.3464 (2)0.6848 (2)0.55409 (16)0.0586 (5)
H140.37240.57760.58260.070*
C150.2560 (2)0.7693 (3)0.46208 (17)0.0650 (5)
H150.22110.71870.42840.078*
C160.2156 (2)0.9293 (3)0.41834 (15)0.0607 (5)
C170.2694 (2)1.0018 (2)0.46948 (16)0.0623 (5)
H170.24401.10880.44070.075*
C180.3601 (2)0.9183 (2)0.56233 (16)0.0564 (4)
H180.39470.96870.59640.068*
C190.1146 (3)1.0231 (4)0.3176 (2)0.0932 (8)
H19A0.00381.06160.34640.140*
H19B0.13640.95670.26650.140*
H19C0.13941.11080.27580.140*
N10.12372 (17)0.73734 (17)1.01560 (12)0.0492 (3)
N20.38211 (16)0.67220 (16)0.84130 (12)0.0482 (3)
O10.58136 (16)0.48817 (17)0.72513 (13)0.0758 (4)
O20.60748 (16)0.7253 (2)0.72858 (12)0.0771 (4)
F1−0.05597 (17)0.7266 (2)1.37482 (11)0.0944 (5)
F2−0.23300 (18)0.6445 (2)1.45635 (11)0.1050 (5)
F3−0.02138 (19)0.49998 (18)1.36833 (12)0.1020 (5)
S10.51074 (5)0.65163 (6)0.72555 (4)0.05661 (18)
U11U22U33U12U13U23
C10.0562 (10)0.0455 (9)0.0529 (10)−0.0191 (8)−0.0149 (8)−0.0053 (7)
C20.0602 (11)0.0482 (10)0.0846 (14)−0.0144 (9)−0.0344 (11)−0.0076 (9)
C30.0427 (10)0.0585 (11)0.1037 (17)−0.0164 (9)−0.0127 (11)−0.0198 (11)
C40.0473 (10)0.0564 (10)0.0756 (13)−0.0231 (8)0.0041 (9)−0.0199 (9)
C50.0462 (9)0.0456 (9)0.0517 (9)−0.0183 (7)−0.0002 (7)−0.0144 (7)
C60.0433 (8)0.0414 (8)0.0475 (9)−0.0150 (7)−0.0060 (7)−0.0121 (7)
C70.0612 (12)0.0861 (15)0.0477 (10)−0.0313 (11)0.0032 (9)−0.0172 (10)
C80.0502 (10)0.0831 (13)0.0427 (9)−0.0317 (9)−0.0003 (7)−0.0193 (9)
C90.0600 (10)0.0541 (10)0.0493 (9)−0.0324 (9)0.0011 (8)−0.0084 (7)
C100.0595 (10)0.0490 (9)0.0479 (9)−0.0269 (8)0.0021 (8)−0.0139 (7)
C110.0650 (11)0.0588 (10)0.0516 (10)−0.0377 (9)−0.0018 (8)−0.0115 (8)
C120.0670 (11)0.0690 (11)0.0508 (10)−0.0406 (10)0.0005 (8)−0.0199 (8)
C130.0414 (8)0.0590 (10)0.0397 (8)−0.0213 (8)0.0039 (7)−0.0068 (7)
C140.0609 (11)0.0564 (10)0.0553 (10)−0.0245 (9)0.0012 (8)−0.0146 (8)
C150.0638 (12)0.0822 (14)0.0566 (11)−0.0333 (11)−0.0024 (9)−0.0254 (10)
C160.0500 (10)0.0817 (14)0.0409 (9)−0.0236 (9)−0.0002 (7)−0.0119 (9)
C170.0643 (12)0.0602 (11)0.0505 (10)−0.0255 (9)−0.0038 (9)−0.0002 (8)
C180.0604 (11)0.0619 (11)0.0494 (10)−0.0326 (9)−0.0038 (8)−0.0068 (8)
C190.0775 (15)0.124 (2)0.0571 (13)−0.0275 (15)−0.0203 (11)−0.0076 (13)
N10.0514 (8)0.0605 (8)0.0421 (7)−0.0291 (7)0.0010 (6)−0.0160 (6)
N20.0475 (8)0.0526 (8)0.0414 (7)−0.0232 (6)−0.0020 (6)−0.0054 (6)
O10.0583 (8)0.0634 (8)0.0647 (9)−0.0005 (7)0.0021 (6)−0.0076 (6)
O20.0539 (8)0.1138 (12)0.0621 (8)−0.0461 (8)−0.0073 (6)−0.0008 (8)
F10.0980 (10)0.1560 (14)0.0594 (8)−0.0745 (10)−0.0026 (7)−0.0361 (8)
F20.0923 (10)0.1675 (15)0.0502 (7)−0.0651 (10)0.0168 (7)−0.0202 (8)
F30.1030 (11)0.0919 (10)0.0645 (8)−0.0078 (8)−0.0260 (7)0.0014 (7)
S10.0409 (3)0.0670 (3)0.0460 (3)−0.0177 (2)−0.00155 (18)−0.0027 (2)
C1—C61.384 (2)C11—N21.464 (2)
C1—C21.390 (3)C11—C121.510 (2)
C1—H10.9300C11—H11A0.9700
C2—C31.368 (3)C11—H11B0.9700
C2—H20.9300C12—N11.456 (2)
C3—C41.364 (3)C12—H12A0.9700
C3—H30.9300C12—H12B0.9700
C4—C51.384 (2)C13—C141.381 (3)
C4—H40.9300C13—C181.382 (3)
C5—C61.398 (2)C13—S11.7625 (17)
C5—C71.496 (3)C14—C151.369 (3)
C6—C81.519 (2)C14—H140.9300
C7—F21.325 (2)C15—C161.386 (3)
C7—F11.328 (3)C15—H150.9300
C7—F31.329 (3)C16—C171.383 (3)
C8—N11.458 (2)C16—C191.510 (3)
C8—H8A0.9700C17—C181.378 (3)
C8—H8B0.9700C17—H170.9300
C9—N11.451 (2)C18—H180.9300
C9—C101.510 (2)C19—H19A0.9600
C9—H9A0.9700C19—H19B0.9600
C9—H9B0.9700C19—H19C0.9600
C10—N21.468 (2)N2—S11.6391 (14)
C10—H10A0.9700O2—S11.4223 (15)
C10—H10B0.9700S1—O11.4282 (15)
C6—C1—C2120.91 (18)N2—C11—H11B110.0
C6—C1—H1119.5C12—C11—H11B110.0
C2—C1—H1119.5H11A—C11—H11B108.4
C3—C2—C1120.35 (18)N1—C12—C11110.19 (14)
C3—C2—H2119.8N1—C12—H12A109.6
C1—C2—H2119.8C11—C12—H12A109.6
C4—C3—C2119.77 (18)N1—C12—H12B109.6
C4—C3—H3120.1C11—C12—H12B109.6
C2—C3—H3120.1H12A—C12—H12B108.1
C3—C4—C5120.43 (18)C14—C13—C18120.00 (17)
C3—C4—H4119.8C14—C13—S1120.06 (14)
C5—C4—H4119.8C18—C13—S1119.91 (14)
C4—C5—C6120.86 (17)C15—C14—C13119.93 (18)
C4—C5—C7118.11 (16)C15—C14—H14120.0
C6—C5—C7121.01 (15)C13—C14—H14120.0
C1—C6—C5117.53 (15)C14—C15—C16121.02 (18)
C1—C6—C8120.23 (15)C14—C15—H15119.5
C5—C6—C8122.15 (15)C16—C15—H15119.5
F2—C7—F1105.93 (17)C17—C16—C15118.43 (18)
F2—C7—F3106.64 (18)C17—C16—C19120.4 (2)
F1—C7—F3106.07 (18)C15—C16—C19121.1 (2)
F2—C7—C5113.14 (17)C18—C17—C16121.17 (18)
F1—C7—C5113.06 (17)C18—C17—H17119.4
F3—C7—C5111.48 (16)C16—C17—H17119.4
N1—C8—C6113.17 (14)C17—C18—C13119.45 (17)
N1—C8—H8A108.9C17—C18—H18120.3
C6—C8—H8A108.9C13—C18—H18120.3
N1—C8—H8B108.9C16—C19—H19A109.5
C6—C8—H8B108.9C16—C19—H19B109.5
H8A—C8—H8B107.8H19A—C19—H19B109.5
N1—C9—C10110.58 (13)C16—C19—H19C109.5
N1—C9—H9A109.5H19A—C19—H19C109.5
C10—C9—H9A109.5H19B—C19—H19C109.5
N1—C9—H9B109.5C9—N1—C12109.73 (14)
C10—C9—H9B109.5C9—N1—C8111.63 (14)
H9A—C9—H9B108.1C12—N1—C8111.32 (13)
N2—C10—C9108.49 (13)C11—N2—C10111.46 (13)
N2—C10—H10A110.0C11—N2—S1118.22 (11)
C9—C10—H10A110.0C10—N2—S1116.83 (11)
N2—C10—H10B110.0O2—S1—O1120.28 (9)
C9—C10—H10B110.0O2—S1—N2106.27 (8)
H10A—C10—H10B108.4O1—S1—N2106.46 (8)
N2—C11—C12108.27 (14)O2—S1—C13108.64 (8)
N2—C11—H11A110.0O1—S1—C13107.92 (9)
C12—C11—H11A110.0N2—S1—C13106.48 (7)
D—H···AD—HH···AD···AD—H···A
C11—H11A···Cgi0.972.84 (1)3.670 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the benzene ring of the trifluoro­methyl­phenyl group (C1–C6).

D—H⋯A D—HH⋯A DA D—H⋯A
C11—H11ACg i 0.972.84 (1)3.670 (2)144

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  An unknown solvate of 1-(2,4-di-chloro-benz-yl)-4-[(4-methyl-phen-yl)sulfon-yl]piperazine.

Authors:  S Sreenivasa; K E Manojkumar; H C Anitha; P A Suchetan; B S Palakshamurthy; Yenagi Jayashree; J Tonannavar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-24

2.  1-(3,4-Di-fluoro-benz-yl)-4-(4-methyl-phenyl-sulfon-yl)piperazine.

Authors:  S Sreenivasa; H C Anitha; P A Suchetan; B S Palakshamurthy; J Savanur; J Tonannavar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-06-29
  2 in total

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