| Literature DB >> 23424463 |
Mohammed Khaled Bin Break1, Sachin Mehta, M Ibrahim M Tahir, Karen A Crouse, Teng-Jin Khoo.
Abstract
The title compound, C(12)H(16)N(2)S(3), was obtained by the condensation reaction of S-benzyl dithio-carbazate and 3-mercaptobutan-2-one. The phenyl ring and thiol (SH) group are approximately perpendicular [S-C-C-C and N-C-C-S torsion angles = 67.8 (3) and 116.9 (2)°, respectively] to the rest of the mol-ecule. In the crystal, mol-ecules are linked by weak S-H⋯S and N-H⋯S hydrogen bonds, π-π inter-actions between the benzene rings [centroid-centroid distance = 3.823 (2) Å] and C-H⋯π inter-actions.Entities:
Year: 2013 PMID: 23424463 PMCID: PMC3569240 DOI: 10.1107/S1600536812051008
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H16N2S3 | |
| Monoclinic, | Cu |
| Cell parameters from 3777 reflections | |
| θ = 4–71° | |
| µ = 4.73 mm−1 | |
| β = 90.234 (2)° | |
| Plate, yellow | |
| 0.25 × 0.10 × 0.08 mm |
| Oxford Diffraction Gemini diffractometer | 2374 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 71.4°, θmin = 5.4° |
| Absorption correction: multi-scan ( | |
| 7359 measured reflections | |
| 2615 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| Method = Modified Sheldrick
| |
| (Δ/σ)max = 0.001 | |
| 2605 reflections | Δρmax = 0.55 e Å−3 |
| 154 parameters | Δρmin = −0.60 e Å−3 |
| 0 restraints |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems open-flow nitrogen cryostat with a nominal stability of 0.1 K. |
| S1 | 0.09283 (4) | 0.86651 (8) | 0.60282 (6) | 0.0199 | |
| C2 | 0.14578 (15) | 0.9210 (3) | 0.4711 (3) | 0.0161 | |
| S3 | 0.25242 (4) | 0.90367 (8) | 0.45582 (6) | 0.0169 | |
| C4 | 0.28225 (15) | 0.8290 (3) | 0.6180 (2) | 0.0188 | |
| C5 | 0.37460 (15) | 0.8307 (3) | 0.6187 (2) | 0.0169 | |
| C6 | 0.41672 (16) | 0.9417 (3) | 0.6956 (3) | 0.0206 | |
| C7 | 0.50166 (17) | 0.9473 (4) | 0.6929 (3) | 0.0225 | |
| C8 | 0.54462 (16) | 0.8430 (4) | 0.6130 (3) | 0.0219 | |
| C9 | 0.50291 (16) | 0.7324 (3) | 0.5353 (3) | 0.0214 | |
| C10 | 0.41832 (16) | 0.7260 (3) | 0.5382 (3) | 0.0197 | |
| N11 | 0.11068 (12) | 0.9875 (3) | 0.3635 (2) | 0.0170 | |
| N12 | 0.16216 (13) | 1.0374 (3) | 0.2636 (2) | 0.0175 | |
| C13 | 0.13156 (16) | 1.1118 (3) | 0.1648 (3) | 0.0177 | |
| C14 | 0.19140 (16) | 1.1704 (3) | 0.0635 (3) | 0.0204 | |
| S15 | 0.17221 (5) | 1.07040 (10) | −0.09485 (8) | 0.0330 | |
| C16 | 0.28359 (14) | 1.1622 (3) | 0.1108 (3) | 0.0174 | |
| C17 | 0.04289 (17) | 1.1502 (4) | 0.1460 (3) | 0.0280 | |
| H42 | 0.2606 | 0.8996 | 0.6857 | 0.0241* | |
| H41 | 0.2610 | 0.7201 | 0.6290 | 0.0236* | |
| H61 | 0.3876 | 1.0135 | 0.7489 | 0.0263* | |
| H71 | 0.5297 | 1.0237 | 0.7454 | 0.0292* | |
| H81 | 0.6020 | 0.8472 | 0.6120 | 0.0276* | |
| H91 | 0.5316 | 0.6627 | 0.4815 | 0.0271* | |
| H101 | 0.3910 | 0.6505 | 0.4850 | 0.0248* | |
| H141 | 0.1776 | 1.2846 | 0.0485 | 0.0260* | |
| H162 | 0.3131 | 1.2050 | 0.0476 | 0.0278* | |
| H161 | 0.2891 | 1.2182 | 0.1858 | 0.0279* | |
| H163 | 0.2963 | 1.0585 | 0.1218 | 0.0273* | |
| H171 | 0.0348 | 1.1957 | 0.0604 | 0.0430* | |
| H173 | 0.0259 | 1.2280 | 0.2111 | 0.0430* | |
| H172 | 0.0109 | 1.0536 | 0.1544 | 0.0427* | |
| H111 | 0.0595 | 1.0101 | 0.3634 | 0.0211* | |
| H151 | 0.1736 | 0.9172 | −0.0413 | 0.0626* |
| S1 | 0.0142 (3) | 0.0288 (4) | 0.0167 (3) | 0.0005 (2) | 0.0001 (2) | 0.0022 (3) |
| C2 | 0.0139 (12) | 0.0171 (12) | 0.0173 (12) | −0.0001 (9) | −0.0009 (9) | −0.0038 (10) |
| S3 | 0.0123 (3) | 0.0223 (3) | 0.0159 (3) | 0.0019 (2) | −0.0009 (2) | 0.0016 (2) |
| C4 | 0.0160 (12) | 0.0258 (14) | 0.0146 (12) | 0.0025 (10) | −0.0014 (9) | 0.0029 (10) |
| C5 | 0.0155 (12) | 0.0223 (13) | 0.0130 (11) | 0.0009 (10) | −0.0014 (9) | 0.0051 (10) |
| C6 | 0.0218 (13) | 0.0247 (14) | 0.0154 (13) | 0.0034 (11) | −0.0004 (10) | 0.0000 (11) |
| C7 | 0.0212 (13) | 0.0281 (15) | 0.0182 (13) | −0.0022 (11) | −0.0040 (10) | 0.0015 (11) |
| C8 | 0.0145 (12) | 0.0294 (15) | 0.0219 (13) | 0.0000 (11) | −0.0016 (10) | 0.0051 (11) |
| C9 | 0.0201 (13) | 0.0242 (14) | 0.0199 (13) | 0.0043 (11) | 0.0027 (10) | 0.0021 (11) |
| C10 | 0.0196 (12) | 0.0211 (13) | 0.0183 (13) | −0.0012 (10) | −0.0021 (10) | 0.0005 (10) |
| N11 | 0.0113 (9) | 0.0217 (11) | 0.0179 (11) | 0.0009 (8) | −0.0003 (8) | 0.0015 (9) |
| N12 | 0.0157 (10) | 0.0176 (11) | 0.0191 (11) | −0.0008 (8) | 0.0001 (8) | 0.0009 (9) |
| C13 | 0.0179 (13) | 0.0184 (12) | 0.0167 (12) | 0.0003 (10) | 0.0001 (10) | −0.0012 (10) |
| C14 | 0.0189 (13) | 0.0195 (13) | 0.0229 (13) | −0.0004 (10) | −0.0007 (10) | 0.0036 (11) |
| S15 | 0.0372 (4) | 0.0348 (4) | 0.0269 (4) | 0.0010 (3) | 0.0047 (3) | 0.0019 (3) |
| C16 | 0.0076 (11) | 0.0178 (13) | 0.0269 (14) | −0.0035 (9) | 0.0069 (9) | 0.0070 (10) |
| C17 | 0.0201 (14) | 0.0412 (18) | 0.0225 (14) | 0.0051 (12) | −0.0010 (11) | 0.0102 (13) |
| S1—C2 | 1.659 (3) | C10—H101 | 0.941 |
| C2—S3 | 1.761 (3) | N11—N12 | 1.384 (3) |
| C2—N11 | 1.350 (3) | N11—H111 | 0.859 |
| S3—C4 | 1.823 (3) | N12—C13 | 1.278 (3) |
| C4—C5 | 1.514 (3) | C13—C14 | 1.504 (4) |
| C4—H42 | 0.972 | C13—C17 | 1.499 (4) |
| C4—H41 | 0.976 | C14—S15 | 1.834 (3) |
| C5—C6 | 1.390 (4) | C14—C16 | 1.585 (3) |
| C5—C10 | 1.393 (4) | C14—H141 | 0.988 |
| C6—C7 | 1.393 (4) | S15—H151 | 1.385 |
| C6—H61 | 0.937 | C16—H162 | 0.880 |
| C7—C8 | 1.382 (4) | C16—H161 | 0.896 |
| C7—H71 | 0.947 | C16—H163 | 0.894 |
| C8—C9 | 1.389 (4) | C17—H171 | 0.955 |
| C8—H81 | 0.941 | C17—H173 | 0.966 |
| C9—C10 | 1.388 (4) | C17—H172 | 0.963 |
| C9—H91 | 0.926 | ||
| S1—C2—S3 | 124.83 (15) | C9—C10—H101 | 119.2 |
| S1—C2—N11 | 122.70 (19) | C2—N11—N12 | 117.1 (2) |
| S3—C2—N11 | 112.46 (19) | C2—N11—H111 | 120.2 |
| C2—S3—C4 | 102.18 (12) | N12—N11—H111 | 122.1 |
| S3—C4—C5 | 105.39 (17) | N11—N12—C13 | 118.7 (2) |
| S3—C4—H42 | 109.5 | N12—C13—C14 | 115.9 (2) |
| C5—C4—H42 | 111.0 | N12—C13—C17 | 125.4 (2) |
| S3—C4—H41 | 108.9 | C14—C13—C17 | 118.6 (2) |
| C5—C4—H41 | 111.4 | C13—C14—S15 | 109.95 (18) |
| H42—C4—H41 | 110.4 | C13—C14—C16 | 113.7 (2) |
| C4—C5—C6 | 120.2 (2) | S15—C14—C16 | 113.94 (19) |
| C4—C5—C10 | 120.5 (2) | C13—C14—H141 | 105.5 |
| C6—C5—C10 | 119.2 (2) | S15—C14—H141 | 105.2 |
| C5—C6—C7 | 120.4 (3) | C16—C14—H141 | 107.8 |
| C5—C6—H61 | 119.6 | C14—S15—H151 | 94.1 |
| C7—C6—H61 | 120.1 | C14—C16—H162 | 106.7 |
| C6—C7—C8 | 120.1 (3) | C14—C16—H161 | 109.1 |
| C6—C7—H71 | 119.7 | H162—C16—H161 | 110.7 |
| C8—C7—H71 | 120.2 | C14—C16—H163 | 107.4 |
| C7—C8—C9 | 119.8 (2) | H162—C16—H163 | 110.6 |
| C7—C8—H81 | 119.6 | H161—C16—H163 | 112.0 |
| C9—C8—H81 | 120.6 | C13—C17—H171 | 109.3 |
| C8—C9—C10 | 120.2 (3) | C13—C17—H173 | 109.8 |
| C8—C9—H91 | 120.0 | H171—C17—H173 | 108.4 |
| C10—C9—H91 | 119.8 | C13—C17—H172 | 109.8 |
| C5—C10—C9 | 120.3 (2) | H171—C17—H172 | 109.7 |
| C5—C10—H101 | 120.5 | H173—C17—H172 | 109.8 |
| H··· | ||||
| S15—H151···S3i | 1.38 | 2.96 | 4.186 (1) | 146 |
| N11—H111···S1ii | 0.86 | 2.72 | 3.567 (2) | 168 |
| C7—H71··· | 0.95 | 2.97 | 3.827 (3) | 152 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C5–C10 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| S15—H151⋯S3i | 1.38 | 2.96 | 4.186 (1) | 146 |
| N11—H111⋯S1ii | 0.86 | 2.72 | 3.567 (2) | 168 |
| C7—H71⋯ | 0.95 | 2.97 | 3.827 (3) | 152 |
Symmetry codes: (i) ; (ii) ; (iii) .