| Literature DB >> 23424455 |
May Lee Low1, Thahira Begum S A Ravoof, Mohamed Ibrahim Mohamed Tahir, Karen A Crouse, Edward R T Tiekink.
Abstract
In the title compound, C(16)H(15)N(3)S(2), the central C(2)N(2)S(2) residue is planar (r.m.s. deviation = 0.045 Å) and the pyridyl and benzene rings are inclined and approximately coplanar to this plane, respectively [dihedral angles = 72.85 (9) and 10.73 (9)°], so that, overall, the mol-ecule adopts an L-shape. The conformation about each of the N=C [1.290 (3) Å] and C=C [1.340 (3) Å] bonds is E. Supra-molecular chains along [1-10] are stabilized by N-H⋯N(pyridine) hydrogen bonding and these are connected into a double layer that stacks along the c-axis direction by C-H⋯π(pyridine) inter-actions.Entities:
Year: 2013 PMID: 23424455 PMCID: PMC3569232 DOI: 10.1107/S1600536812051537
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H15N3S2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu |
| Cell parameters from 5833 reflections | |
| θ = 3–72° | |
| µ = 3.14 mm−1 | |
| α = 77.315 (9)° | |
| β = 84.735 (9)° | Thin-plate, orange |
| γ = 78.193 (8)° | 0.13 × 0.06 × 0.01 mm |
| Oxford Diffraction Xcaliber Eos Gemini diffractometer | 2918 independent reflections |
| Radiation source: fine-focus sealed tube | 2469 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.1952 pixels mm-1 | θmax = 72.3°, θmin = 3.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 15664 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2918 reflections | (Δ/σ)max < 0.001 |
| 193 parameters | Δρmax = 0.42 e Å−3 |
| 1 restraint | Δρmin = −0.29 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.36876 (9) | 0.53086 (5) | 0.18295 (4) | 0.02532 (16) | |
| S2 | 0.33320 (10) | 0.32045 (5) | 0.06781 (4) | 0.02701 (17) | |
| N1 | 0.6775 (3) | 0.29601 (17) | 0.19095 (13) | 0.0256 (4) | |
| H1n | 0.749 (4) | 0.2148 (14) | 0.1794 (18) | 0.031* | |
| N2 | 0.7786 (3) | 0.34184 (17) | 0.25917 (13) | 0.0262 (4) | |
| N3 | −0.1177 (4) | 1.01818 (18) | 0.16683 (15) | 0.0338 (5) | |
| C1 | 0.4717 (4) | 0.3730 (2) | 0.14713 (15) | 0.0233 (4) | |
| C2 | 0.9846 (4) | 0.2638 (2) | 0.29282 (16) | 0.0266 (5) | |
| H2 | 1.0579 | 0.1846 | 0.2682 | 0.032* | |
| C3 | 1.1038 (4) | 0.2962 (2) | 0.36748 (16) | 0.0284 (5) | |
| H3 | 1.0295 | 0.3764 | 0.3909 | 0.034* | |
| C4 | 1.3162 (4) | 0.2171 (2) | 0.40512 (16) | 0.0279 (5) | |
| H4 | 1.3893 | 0.1405 | 0.3776 | 0.033* | |
| C5 | 1.4484 (4) | 0.2350 (2) | 0.48372 (16) | 0.0284 (5) | |
| C6 | 1.3649 (5) | 0.3430 (2) | 0.53137 (18) | 0.0370 (6) | |
| H6 | 1.2139 | 0.4074 | 0.5133 | 0.044* | |
| C7 | 1.4982 (5) | 0.3574 (3) | 0.60420 (19) | 0.0393 (6) | |
| H7 | 1.4401 | 0.4323 | 0.6349 | 0.047* | |
| C8 | 1.7160 (5) | 0.2633 (3) | 0.63253 (18) | 0.0368 (6) | |
| H8 | 1.8074 | 0.2733 | 0.6826 | 0.044* | |
| C9 | 1.8000 (4) | 0.1543 (3) | 0.58746 (18) | 0.0359 (5) | |
| H9 | 1.9484 | 0.0889 | 0.6072 | 0.043* | |
| C10 | 1.6683 (4) | 0.1405 (2) | 0.51347 (17) | 0.0312 (5) | |
| H10 | 1.7283 | 0.0659 | 0.4827 | 0.037* | |
| C11 | 0.1118 (4) | 0.6125 (2) | 0.10459 (17) | 0.0269 (5) | |
| H11A | 0.1725 | 0.6164 | 0.0379 | 0.032* | |
| H11B | −0.0298 | 0.5612 | 0.1181 | 0.032* | |
| C12 | 0.0263 (4) | 0.7559 (2) | 0.12385 (16) | 0.0262 (5) | |
| C13 | −0.1950 (4) | 0.7908 (2) | 0.17696 (19) | 0.0357 (6) | |
| H13 | −0.3022 | 0.7258 | 0.1998 | 0.043* | |
| C14 | −0.2588 (4) | 0.9219 (2) | 0.1965 (2) | 0.0390 (6) | |
| H14 | −0.4112 | 0.9441 | 0.2330 | 0.047* | |
| C15 | 0.0961 (5) | 0.9839 (2) | 0.11574 (18) | 0.0345 (5) | |
| H15 | 0.1999 | 1.0508 | 0.0940 | 0.041* | |
| C16 | 0.1742 (4) | 0.8555 (2) | 0.09283 (17) | 0.0314 (5) | |
| H16 | 0.3277 | 0.8361 | 0.0562 | 0.038* |
| S1 | 0.0270 (3) | 0.0170 (3) | 0.0333 (3) | 0.00106 (19) | −0.0078 (2) | −0.0104 (2) |
| S2 | 0.0278 (3) | 0.0215 (3) | 0.0342 (3) | −0.0011 (2) | −0.0060 (2) | −0.0124 (2) |
| N1 | 0.0275 (9) | 0.0184 (8) | 0.0315 (10) | 0.0004 (7) | −0.0035 (8) | −0.0100 (7) |
| N2 | 0.0260 (9) | 0.0226 (9) | 0.0312 (10) | −0.0014 (7) | −0.0049 (7) | −0.0095 (7) |
| N3 | 0.0309 (10) | 0.0233 (9) | 0.0484 (13) | 0.0048 (7) | −0.0124 (9) | −0.0149 (9) |
| C1 | 0.0249 (10) | 0.0176 (9) | 0.0272 (11) | −0.0021 (8) | 0.0002 (8) | −0.0062 (8) |
| C2 | 0.0251 (10) | 0.0224 (10) | 0.0323 (12) | −0.0021 (8) | −0.0013 (9) | −0.0078 (9) |
| C3 | 0.0292 (11) | 0.0234 (10) | 0.0334 (12) | −0.0025 (8) | −0.0023 (9) | −0.0096 (9) |
| C4 | 0.0300 (11) | 0.0238 (10) | 0.0299 (12) | −0.0020 (8) | 0.0003 (9) | −0.0089 (9) |
| C5 | 0.0271 (11) | 0.0262 (11) | 0.0313 (12) | −0.0045 (8) | −0.0021 (9) | −0.0051 (9) |
| C6 | 0.0370 (13) | 0.0302 (12) | 0.0429 (15) | 0.0047 (9) | −0.0111 (11) | −0.0122 (10) |
| C7 | 0.0419 (14) | 0.0341 (13) | 0.0436 (15) | 0.0009 (10) | −0.0083 (11) | −0.0166 (11) |
| C8 | 0.0345 (12) | 0.0433 (14) | 0.0341 (13) | −0.0045 (10) | −0.0093 (10) | −0.0111 (11) |
| C9 | 0.0281 (11) | 0.0395 (13) | 0.0387 (14) | 0.0020 (9) | −0.0057 (10) | −0.0111 (11) |
| C10 | 0.0291 (11) | 0.0303 (11) | 0.0339 (13) | −0.0007 (9) | −0.0007 (9) | −0.0108 (9) |
| C11 | 0.0268 (10) | 0.0201 (10) | 0.0344 (12) | 0.0004 (8) | −0.0097 (9) | −0.0077 (9) |
| C12 | 0.0270 (10) | 0.0198 (10) | 0.0320 (12) | 0.0022 (8) | −0.0113 (9) | −0.0081 (8) |
| C13 | 0.0260 (11) | 0.0314 (12) | 0.0542 (16) | −0.0051 (9) | −0.0020 (10) | −0.0185 (11) |
| C14 | 0.0257 (11) | 0.0359 (13) | 0.0584 (17) | 0.0018 (9) | −0.0017 (11) | −0.0235 (12) |
| C15 | 0.0389 (13) | 0.0204 (10) | 0.0439 (14) | −0.0034 (9) | −0.0068 (11) | −0.0060 (9) |
| C16 | 0.0328 (11) | 0.0230 (10) | 0.0363 (13) | 0.0005 (9) | −0.0022 (10) | −0.0071 (9) |
| S1—C1 | 1.760 (2) | C7—C8 | 1.383 (3) |
| S1—C11 | 1.817 (2) | C7—H7 | 0.9500 |
| S2—C1 | 1.662 (2) | C8—C9 | 1.385 (4) |
| N1—C1 | 1.342 (3) | C8—H8 | 0.9500 |
| N1—N2 | 1.379 (3) | C9—C10 | 1.389 (3) |
| N1—H1n | 0.880 (10) | C9—H9 | 0.9500 |
| N2—C2 | 1.290 (3) | C10—H10 | 0.9500 |
| N3—C14 | 1.332 (3) | C11—C12 | 1.514 (3) |
| N3—C15 | 1.337 (3) | C11—H11A | 0.9900 |
| C2—C3 | 1.439 (3) | C11—H11B | 0.9900 |
| C2—H2 | 0.9500 | C12—C13 | 1.385 (3) |
| C3—C4 | 1.340 (3) | C12—C16 | 1.386 (3) |
| C3—H3 | 0.9500 | C13—C14 | 1.391 (3) |
| C4—C5 | 1.463 (3) | C13—H13 | 0.9500 |
| C4—H4 | 0.9500 | C14—H14 | 0.9500 |
| C5—C10 | 1.398 (3) | C15—C16 | 1.389 (3) |
| C5—C6 | 1.400 (3) | C15—H15 | 0.9500 |
| C6—C7 | 1.382 (3) | C16—H16 | 0.9500 |
| C6—H6 | 0.9500 | ||
| C1—S1—C11 | 101.51 (10) | C9—C8—H8 | 120.2 |
| C1—N1—N2 | 119.67 (17) | C8—C9—C10 | 120.2 (2) |
| C1—N1—H1n | 122.4 (17) | C8—C9—H9 | 119.9 |
| N2—N1—H1n | 117.9 (17) | C10—C9—H9 | 119.9 |
| C2—N2—N1 | 114.56 (18) | C9—C10—C5 | 120.9 (2) |
| C14—N3—C15 | 116.84 (19) | C9—C10—H10 | 119.6 |
| N1—C1—S2 | 121.98 (16) | C5—C10—H10 | 119.6 |
| N1—C1—S1 | 113.13 (16) | C12—C11—S1 | 105.44 (14) |
| S2—C1—S1 | 124.88 (12) | C12—C11—H11A | 110.7 |
| N2—C2—C3 | 120.4 (2) | S1—C11—H11A | 110.7 |
| N2—C2—H2 | 119.8 | C12—C11—H11B | 110.7 |
| C3—C2—H2 | 119.8 | S1—C11—H11B | 110.7 |
| C4—C3—C2 | 122.2 (2) | H11A—C11—H11B | 108.8 |
| C4—C3—H3 | 118.9 | C13—C12—C16 | 117.4 (2) |
| C2—C3—H3 | 118.9 | C13—C12—C11 | 121.6 (2) |
| C3—C4—C5 | 127.5 (2) | C16—C12—C11 | 121.0 (2) |
| C3—C4—H4 | 116.3 | C12—C13—C14 | 119.3 (2) |
| C5—C4—H4 | 116.3 | C12—C13—H13 | 120.3 |
| C10—C5—C6 | 117.9 (2) | C14—C13—H13 | 120.3 |
| C10—C5—C4 | 119.1 (2) | N3—C14—C13 | 123.6 (2) |
| C6—C5—C4 | 123.0 (2) | N3—C14—H14 | 118.2 |
| C7—C6—C5 | 121.1 (2) | C13—C14—H14 | 118.2 |
| C7—C6—H6 | 119.4 | N3—C15—C16 | 123.4 (2) |
| C5—C6—H6 | 119.4 | N3—C15—H15 | 118.3 |
| C6—C7—C8 | 120.2 (2) | C16—C15—H15 | 118.3 |
| C6—C7—H7 | 119.9 | C12—C16—C15 | 119.4 (2) |
| C8—C7—H7 | 119.9 | C12—C16—H16 | 120.3 |
| C7—C8—C9 | 119.7 (2) | C15—C16—H16 | 120.3 |
| C7—C8—H8 | 120.2 | ||
| C1—N1—N2—C2 | −176.15 (19) | C8—C9—C10—C5 | −0.5 (4) |
| N2—N1—C1—S2 | −177.22 (15) | C6—C5—C10—C9 | −0.5 (3) |
| N2—N1—C1—S1 | 2.5 (2) | C4—C5—C10—C9 | 179.6 (2) |
| C11—S1—C1—N1 | 175.41 (16) | C1—S1—C11—C12 | −174.77 (15) |
| C11—S1—C1—S2 | −4.84 (16) | S1—C11—C12—C13 | −103.5 (2) |
| N1—N2—C2—C3 | −177.19 (18) | S1—C11—C12—C16 | 73.2 (2) |
| N2—C2—C3—C4 | 179.2 (2) | C16—C12—C13—C14 | 0.1 (4) |
| C2—C3—C4—C5 | −176.9 (2) | C11—C12—C13—C14 | 176.9 (2) |
| C3—C4—C5—C10 | 179.6 (2) | C15—N3—C14—C13 | −0.1 (4) |
| C3—C4—C5—C6 | −0.2 (4) | C12—C13—C14—N3 | 0.0 (4) |
| C10—C5—C6—C7 | 1.3 (4) | C14—N3—C15—C16 | 0.2 (4) |
| C4—C5—C6—C7 | −178.8 (2) | C13—C12—C16—C15 | 0.0 (3) |
| C5—C6—C7—C8 | −1.1 (4) | C11—C12—C16—C15 | −176.9 (2) |
| C6—C7—C8—C9 | 0.1 (4) | N3—C15—C16—C12 | −0.1 (4) |
| C7—C8—C9—C10 | 0.8 (4) |
| H··· | ||||
| N1—H1 | 0.88 (2) | 2.02 (2) | 2.897 (3) | 172 (2) |
| C8—H8··· | 0.95 | 2.92 | 3.701 (3) | 141 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the N3,C12–C15 pyridyl ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.88 (2) | 2.02 (2) | 2.897 (3) | 172 (2) |
| C8—H8⋯ | 0.95 | 2.92 | 3.701 (3) | 141 |
Symmetry codes: (i) ; (ii) .