| Literature DB >> 23424450 |
Konstantin V Kudryavtsev1, Polina M Ivantcova, Andrei V Churakov.
Abstract
In the title compound, C(16)H(15)F(3)N(2)O(4), the relative stereochemistry of the four stereogenic C atoms has been determined. The carb-oxy-methyl and 2-(trifluoro-meth-yl)-phenyl substituents of the pyrrolidine cycle have a cis mutual arrangement. The five-membered saturated aza-cycle adopts an envelope conformation with the N atom occupying the flap position. In the crystal, adjacent mol-ecules are combined in centrosymmetric dimers by two weak N-H⋯O hydrogen bonds.Entities:
Year: 2013 PMID: 23424450 PMCID: PMC3569227 DOI: 10.1107/S1600536812051471
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H15F3N2O4 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 7037 reflections |
| θ = 2.6–30.2° | |
| µ = 0.13 mm−1 | |
| Block, colourless | |
| 0.35 × 0.30 × 0.25 mm |
| Bruker SMART APEXII diffractometer | 4585 independent reflections |
| Radiation source: fine-focus sealed tube | 3698 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 30.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 28987 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| All H-atom parameters refined | |
| 4585 reflections | (Δ/σ)max = 0.001 |
| 286 parameters | Δρmax = 0.41 e Å−3 |
| 0 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.37232 (8) | 0.96741 (8) | 0.58121 (4) | 0.01832 (19) | |
| N2 | 0.43578 (9) | 0.80090 (8) | 0.70073 (5) | 0.0223 (2) | |
| O1 | 0.59707 (8) | 0.90401 (9) | 0.70207 (5) | 0.0323 (2) | |
| O2 | 0.25210 (8) | 0.73656 (7) | 0.69180 (4) | 0.0293 (2) | |
| O3 | 0.60527 (8) | 1.01872 (8) | 0.56746 (4) | 0.0261 (2) | |
| O4 | 0.59604 (7) | 1.12962 (7) | 0.64969 (4) | 0.0265 (2) | |
| F1 | 0.02339 (7) | 0.95536 (7) | 0.66222 (4) | 0.0360 (2) | |
| F2 | 0.01291 (10) | 1.04045 (8) | 0.57563 (5) | 0.0519 (3) | |
| F3 | −0.11317 (8) | 0.92265 (11) | 0.59782 (7) | 0.0708 (4) | |
| C1 | 0.49344 (10) | 0.89519 (10) | 0.69792 (5) | 0.0218 (2) | |
| C2 | 0.40611 (10) | 0.98226 (9) | 0.68818 (5) | 0.0187 (2) | |
| C3 | 0.42693 (10) | 1.03976 (9) | 0.62520 (5) | 0.0182 (2) | |
| C4 | 0.25821 (9) | 0.94880 (9) | 0.60901 (5) | 0.0180 (2) | |
| C5 | 0.29053 (9) | 0.92447 (9) | 0.67894 (5) | 0.0187 (2) | |
| C6 | 0.31822 (10) | 0.80982 (9) | 0.69077 (5) | 0.0206 (2) | |
| C7 | 0.49500 (13) | 0.70166 (11) | 0.71063 (7) | 0.0309 (3) | |
| C8 | 0.55262 (10) | 1.05870 (9) | 0.60979 (5) | 0.0197 (2) | |
| C9 | 0.71865 (12) | 1.14732 (14) | 0.64520 (7) | 0.0352 (3) | |
| C10 | −0.00083 (11) | 0.94442 (12) | 0.60086 (7) | 0.0342 (3) | |
| C11 | 0.19231 (9) | 0.86470 (9) | 0.57357 (5) | 0.0182 (2) | |
| C12 | 0.25319 (10) | 0.78516 (10) | 0.54317 (6) | 0.0238 (2) | |
| C13 | 0.19746 (11) | 0.70890 (10) | 0.50777 (6) | 0.0246 (2) | |
| C14 | 0.07863 (11) | 0.70963 (10) | 0.50236 (6) | 0.0241 (2) | |
| C15 | 0.01667 (11) | 0.78587 (10) | 0.53409 (6) | 0.0265 (3) | |
| C16 | 0.07221 (10) | 0.86314 (10) | 0.56912 (6) | 0.0224 (2) | |
| H4 | 0.2122 (13) | 1.0153 (12) | 0.6103 (7) | 0.023 (4)* | |
| H14 | 0.0394 (13) | 0.6570 (12) | 0.4770 (7) | 0.024 (4)* | |
| H5 | 0.2277 (12) | 0.9465 (11) | 0.7074 (7) | 0.018 (3)* | |
| H1 | 0.3693 (12) | 0.9935 (12) | 0.5427 (7) | 0.021 (4)* | |
| H3 | 0.3902 (13) | 1.1102 (12) | 0.6286 (7) | 0.025 (4)* | |
| H15 | −0.0638 (14) | 0.7870 (13) | 0.5322 (8) | 0.034 (4)* | |
| H2 | 0.4071 (13) | 1.0292 (13) | 0.7231 (7) | 0.028 (4)* | |
| H12 | 0.3371 (15) | 0.7847 (13) | 0.5480 (8) | 0.034 (4)* | |
| H13 | 0.2416 (14) | 0.6568 (13) | 0.4868 (8) | 0.032 (4)* | |
| H73 | 0.5522 (17) | 0.7131 (15) | 0.7416 (10) | 0.051 (5)* | |
| H72 | 0.5263 (16) | 0.6773 (15) | 0.6724 (10) | 0.048 (5)* | |
| H93 | 0.7376 (17) | 1.2026 (16) | 0.6754 (9) | 0.053 (5)* | |
| H71 | 0.4386 (16) | 0.6518 (15) | 0.7264 (9) | 0.043 (5)* | |
| H92 | 0.7571 (18) | 1.0823 (17) | 0.6561 (9) | 0.052 (6)* | |
| H91 | 0.7395 (18) | 1.1612 (16) | 0.6019 (10) | 0.057 (6)* |
| N1 | 0.0192 (4) | 0.0201 (5) | 0.0156 (4) | −0.0034 (3) | −0.0001 (3) | −0.0012 (3) |
| N2 | 0.0226 (5) | 0.0219 (5) | 0.0223 (4) | −0.0002 (4) | −0.0016 (4) | 0.0028 (4) |
| O1 | 0.0209 (4) | 0.0408 (6) | 0.0351 (5) | −0.0038 (4) | −0.0069 (4) | 0.0116 (4) |
| O2 | 0.0306 (5) | 0.0260 (5) | 0.0313 (4) | −0.0092 (4) | −0.0024 (4) | 0.0040 (4) |
| O3 | 0.0235 (4) | 0.0328 (5) | 0.0219 (4) | −0.0027 (4) | 0.0024 (3) | −0.0044 (3) |
| O4 | 0.0226 (4) | 0.0287 (5) | 0.0282 (4) | −0.0085 (4) | 0.0013 (3) | −0.0080 (4) |
| F1 | 0.0303 (4) | 0.0427 (5) | 0.0349 (4) | 0.0047 (3) | 0.0050 (3) | −0.0139 (4) |
| F2 | 0.0706 (7) | 0.0358 (5) | 0.0493 (6) | 0.0292 (5) | −0.0191 (5) | −0.0091 (4) |
| F3 | 0.0184 (4) | 0.0833 (8) | 0.1107 (10) | 0.0122 (5) | −0.0119 (5) | −0.0622 (8) |
| C1 | 0.0222 (5) | 0.0272 (6) | 0.0162 (5) | −0.0026 (4) | −0.0030 (4) | 0.0019 (4) |
| C2 | 0.0199 (5) | 0.0206 (5) | 0.0157 (4) | −0.0035 (4) | 0.0002 (4) | −0.0033 (4) |
| C3 | 0.0191 (5) | 0.0176 (5) | 0.0178 (4) | −0.0020 (4) | −0.0002 (4) | −0.0017 (4) |
| C4 | 0.0169 (5) | 0.0184 (5) | 0.0185 (5) | −0.0004 (4) | 0.0001 (4) | −0.0024 (4) |
| C5 | 0.0172 (5) | 0.0215 (5) | 0.0174 (4) | −0.0020 (4) | 0.0016 (4) | −0.0021 (4) |
| C6 | 0.0223 (5) | 0.0235 (6) | 0.0161 (5) | −0.0027 (4) | 0.0010 (4) | 0.0000 (4) |
| C7 | 0.0309 (7) | 0.0268 (7) | 0.0352 (7) | 0.0057 (5) | −0.0003 (5) | 0.0065 (5) |
| C8 | 0.0207 (5) | 0.0195 (5) | 0.0189 (5) | −0.0022 (4) | −0.0014 (4) | 0.0009 (4) |
| C9 | 0.0232 (6) | 0.0457 (9) | 0.0367 (7) | −0.0127 (6) | 0.0005 (5) | −0.0083 (6) |
| C10 | 0.0202 (6) | 0.0376 (8) | 0.0448 (8) | 0.0082 (5) | −0.0101 (5) | −0.0172 (6) |
| C11 | 0.0182 (5) | 0.0191 (5) | 0.0174 (5) | −0.0019 (4) | −0.0003 (4) | −0.0009 (4) |
| C12 | 0.0186 (5) | 0.0255 (6) | 0.0274 (5) | −0.0036 (4) | 0.0050 (4) | −0.0062 (4) |
| C13 | 0.0254 (6) | 0.0226 (6) | 0.0257 (5) | −0.0034 (5) | 0.0065 (4) | −0.0061 (4) |
| C14 | 0.0262 (6) | 0.0228 (6) | 0.0231 (5) | −0.0045 (5) | −0.0024 (4) | −0.0039 (4) |
| C15 | 0.0198 (5) | 0.0290 (6) | 0.0307 (6) | 0.0000 (5) | −0.0065 (5) | −0.0059 (5) |
| C16 | 0.0185 (5) | 0.0234 (6) | 0.0254 (5) | 0.0036 (4) | −0.0044 (4) | −0.0048 (4) |
| N1—C3 | 1.4578 (14) | C4—C5 | 1.5633 (15) |
| N1—C4 | 1.4704 (14) | C4—H4 | 1.002 (15) |
| N1—H1 | 0.884 (15) | C5—C6 | 1.5164 (17) |
| N2—C1 | 1.3766 (16) | C5—H5 | 0.988 (14) |
| N2—C6 | 1.3866 (15) | C7—H73 | 0.95 (2) |
| N2—C7 | 1.4545 (16) | C7—H72 | 0.94 (2) |
| O1—C1 | 1.2124 (14) | C7—H71 | 0.972 (19) |
| O2—C6 | 1.2089 (15) | C9—H93 | 0.98 (2) |
| O3—C8 | 1.2008 (14) | C9—H92 | 0.97 (2) |
| O4—C8 | 1.3375 (14) | C9—H91 | 0.97 (2) |
| O4—C9 | 1.4451 (15) | C10—C16 | 1.4990 (17) |
| F1—C10 | 1.3406 (17) | C11—C12 | 1.3942 (16) |
| F2—C10 | 1.3452 (19) | C11—C16 | 1.3984 (15) |
| F3—C10 | 1.3357 (16) | C12—C13 | 1.3886 (16) |
| C1—C2 | 1.5173 (17) | C12—H12 | 0.980 (17) |
| C2—C5 | 1.5437 (15) | C13—C14 | 1.3852 (17) |
| C2—C3 | 1.5444 (15) | C13—H13 | 0.950 (17) |
| C2—H2 | 0.953 (16) | C14—C15 | 1.3842 (18) |
| C3—C8 | 1.5157 (16) | C14—H14 | 0.973 (15) |
| C3—H3 | 0.997 (16) | C15—C16 | 1.3923 (17) |
| C4—C11 | 1.5168 (15) | C15—H15 | 0.936 (17) |
| C3—N1—C4 | 103.70 (8) | N2—C7—H72 | 110.1 (12) |
| C3—N1—H1 | 112.0 (10) | H73—C7—H72 | 112.3 (16) |
| C4—N1—H1 | 113.3 (9) | N2—C7—H71 | 107.4 (11) |
| C1—N2—C6 | 113.64 (10) | H73—C7—H71 | 109.5 (16) |
| C1—N2—C7 | 122.31 (11) | H72—C7—H71 | 110.0 (16) |
| C6—N2—C7 | 124.00 (11) | O3—C8—O4 | 124.67 (11) |
| C8—O4—C9 | 115.80 (10) | O3—C8—C3 | 125.80 (10) |
| O1—C1—N2 | 124.12 (12) | O4—C8—C3 | 109.51 (9) |
| O1—C1—C2 | 127.31 (11) | O4—C9—H93 | 106.9 (12) |
| N2—C1—C2 | 108.57 (10) | O4—C9—H92 | 107.7 (12) |
| C1—C2—C5 | 104.50 (9) | H93—C9—H92 | 110.8 (17) |
| C1—C2—C3 | 111.11 (9) | O4—C9—H91 | 109.7 (12) |
| C5—C2—C3 | 104.61 (9) | H93—C9—H91 | 115.8 (17) |
| C1—C2—H2 | 110.2 (10) | H92—C9—H91 | 105.6 (17) |
| C5—C2—H2 | 114.1 (10) | F3—C10—F1 | 105.89 (13) |
| C3—C2—H2 | 112.0 (10) | F3—C10—F2 | 106.58 (12) |
| N1—C3—C8 | 112.42 (9) | F1—C10—F2 | 105.55 (11) |
| N1—C3—C2 | 100.80 (9) | F3—C10—C16 | 112.82 (11) |
| C8—C3—C2 | 114.43 (9) | F1—C10—C16 | 112.98 (11) |
| N1—C3—H3 | 115.4 (9) | F2—C10—C16 | 112.44 (13) |
| C8—C3—H3 | 106.6 (9) | C12—C11—C16 | 117.67 (10) |
| C2—C3—H3 | 107.3 (9) | C12—C11—C4 | 119.15 (10) |
| N1—C4—C11 | 111.69 (9) | C16—C11—C4 | 123.17 (10) |
| N1—C4—C5 | 101.36 (8) | C13—C12—C11 | 121.52 (11) |
| C11—C4—C5 | 116.93 (9) | C13—C12—H12 | 121.0 (10) |
| N1—C4—H4 | 110.8 (9) | C11—C12—H12 | 117.4 (10) |
| C11—C4—H4 | 109.9 (9) | C14—C13—C12 | 120.32 (11) |
| C5—C4—H4 | 105.7 (8) | C14—C13—H13 | 120.2 (10) |
| C6—C5—C2 | 104.70 (9) | C12—C13—H13 | 119.4 (10) |
| C6—C5—C4 | 113.54 (9) | C15—C14—C13 | 118.85 (11) |
| C2—C5—C4 | 103.61 (9) | C15—C14—H14 | 120.6 (9) |
| C6—C5—H5 | 109.2 (8) | C13—C14—H14 | 120.5 (9) |
| C2—C5—H5 | 115.4 (8) | C14—C15—C16 | 121.01 (11) |
| C4—C5—H5 | 110.4 (8) | C14—C15—H15 | 120.6 (10) |
| O2—C6—N2 | 124.03 (11) | C16—C15—H15 | 118.4 (10) |
| O2—C6—C5 | 127.72 (11) | C15—C16—C11 | 120.57 (11) |
| N2—C6—C5 | 108.25 (9) | C15—C16—C10 | 117.79 (11) |
| N2—C7—H73 | 107.4 (12) | C11—C16—C10 | 121.63 (11) |
| H··· | ||||
| N1—H1···O3i | 0.884 (15) | 2.363 (15) | 3.1738 (13) | 152.5 (13) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O3i | 0.884 (15) | 2.363 (15) | 3.1738 (13) | 152.5 (13) |
Symmetry code: (i) .