Literature DB >> 23424405

Dichlorido(2,9-dimethyl-1,10-phenanthroline-κ(2)N,N')mercury(II).

Ismail Warad1, Mousa Al-Noaimi, Salim F Haddad, Rema Othman.   

Abstract

The title compound, [HgCl(2)(C(14)H(12)N(2))], consists of one 2,9-dimethyl-1,10-phenanthroline (dmphen) ligand chelating the Hg(II) ion and two chloride ligands coordinating to the Hg(II) ion, forming a distorted tetra-hedral environment. The dmphen ligand is nearly planar (r.m.s. deviation = 0.0225 Å). The dihedral angle between the normal to the plane defined by the Hg(II) atom and the two Cl atoms and the normal to the plane of the dmphen ring is 81.8 (1)°.

Entities:  

Year:  2013        PMID: 23424405      PMCID: PMC3569203          DOI: 10.1107/S1600536813001086

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see Alizadeh (2009 ▶); Alizadeh et al. (2009 ▶); Wang & Zhong (2009 ▶); Warad et al. (2011 ▶). For properties and application of mercury(II) complexes, see: Ramazani et al. (2005 ▶); Mahjoub et al. (2004 ▶); Canty & Maker (1976 ▶); Canty & Lee (1982 ▶).

Experimental

Crystal data

[HgCl2(C14H12N2)] M = 479.75 Monoclinic, a = 7.5732 (13) Å b = 10.3733 (16) Å c = 18.673 (2) Å β = 94.308 (12)° V = 1462.8 (4) Å3 Z = 4 Mo Kα radiation μ = 10.87 mm−1 T = 293 K 0.22 × 0.20 × 0.18 mm

Data collection

Agilent Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.106, T max = 0.140 5483 measured reflections 2564 independent reflections 1758 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.128 S = 0.99 2564 reflections 174 parameters H-atom parameters constrained Δρmax = 1.81 e Å−3 Δρmin = −1.83 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813001086/br2220sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813001086/br2220Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgCl2(C14H12N2)]F(000) = 896
Mr = 479.75Dx = 2.178 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1534 reflections
a = 7.5732 (13) Åθ = 2.9–29.0°
b = 10.3733 (16) ŵ = 10.87 mm1
c = 18.673 (2) ÅT = 293 K
β = 94.308 (12)°Block, colourless
V = 1462.8 (4) Å30.22 × 0.20 × 0.18 mm
Z = 4
Agilent Xcalibur Eos diffractometer2564 independent reflections
Radiation source: Enhance (Mo) X-ray Source1758 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.061
Detector resolution: 16.0534 pixels mm-1θmax = 25.0°, θmin = 2.9°
ω scansh = −9→7
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −12→12
Tmin = 0.106, Tmax = 0.140l = −16→22
5483 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0521P)2] where P = (Fo2 + 2Fc2)/3
2564 reflections(Δ/σ)max < 0.001
174 parametersΔρmax = 1.81 e Å3
0 restraintsΔρmin = −1.83 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Hg10.21008 (6)0.28289 (4)0.39470 (2)0.0597 (2)
Cl1−0.0404 (4)0.3290 (4)0.31096 (16)0.0818 (10)
Cl20.4266 (5)0.4523 (3)0.39503 (19)0.0871 (11)
C50.3385 (16)−0.2144 (11)0.4986 (7)0.063 (3)
H5A0.3736−0.30020.49750.076*
N10.2952 (11)0.0704 (7)0.3787 (4)0.047 (2)
C10.3465 (14)0.0196 (11)0.3185 (6)0.057 (3)
C100.1290 (15)0.2260 (10)0.5625 (7)0.055 (3)
C110.2939 (12)−0.0049 (11)0.4375 (5)0.048 (2)
C30.3905 (15)−0.1866 (12)0.3704 (7)0.060 (3)
H3A0.4210−0.27310.36700.072*
C80.1676 (15)0.0244 (12)0.6240 (6)0.067 (3)
H8A0.1636−0.02470.66550.080*
C120.2350 (11)0.0470 (11)0.5026 (5)0.048 (3)
N20.1849 (11)0.1747 (8)0.5019 (4)0.045 (2)
C70.2276 (13)−0.0328 (10)0.5619 (6)0.052 (3)
C140.0775 (16)0.3651 (12)0.5595 (6)0.073 (4)
H14A0.18220.41760.56150.110*
H14B0.01000.38530.59950.110*
H14C0.00730.38190.51550.110*
C40.3430 (13)−0.1380 (10)0.4363 (6)0.052 (3)
C20.3929 (15)−0.1104 (11)0.3118 (7)0.066 (3)
H2A0.4245−0.14340.26830.080*
C60.2834 (14)−0.1637 (11)0.5598 (7)0.062 (3)
H6A0.2820−0.21470.60070.074*
C90.1155 (14)0.1497 (14)0.6246 (5)0.061 (3)
H9A0.07150.18500.66540.074*
C130.3475 (18)0.1076 (12)0.2547 (6)0.083 (4)
H13A0.34490.05720.21160.124*
H13B0.45280.15940.25870.124*
H13C0.24530.16260.25320.124*
U11U22U33U12U13U23
Hg10.0813 (4)0.0419 (4)0.0565 (3)0.0057 (2)0.0083 (3)0.00836 (19)
Cl10.075 (2)0.111 (3)0.0590 (19)0.016 (2)0.0022 (15)0.0250 (18)
Cl20.106 (3)0.0474 (18)0.107 (3)−0.0145 (19)0.003 (2)0.0152 (18)
C50.070 (8)0.046 (8)0.075 (9)−0.002 (6)0.009 (6)0.023 (7)
N10.056 (5)0.033 (5)0.051 (5)−0.001 (4)0.002 (4)−0.003 (4)
C10.061 (7)0.052 (7)0.059 (7)0.003 (6)0.014 (5)0.003 (6)
C100.053 (7)0.047 (7)0.065 (8)0.003 (5)0.007 (5)−0.008 (6)
C110.037 (6)0.056 (7)0.049 (6)−0.003 (5)−0.001 (4)0.003 (6)
C30.050 (7)0.049 (7)0.080 (9)0.007 (5)−0.004 (6)−0.003 (7)
C80.071 (8)0.066 (8)0.062 (8)−0.016 (7)−0.002 (6)0.017 (7)
C120.020 (5)0.060 (7)0.062 (7)−0.006 (5)−0.007 (4)0.008 (6)
N20.051 (5)0.043 (5)0.041 (5)−0.006 (4)0.004 (4)−0.002 (4)
C70.062 (7)0.038 (6)0.055 (7)−0.007 (5)0.001 (5)0.015 (5)
C140.078 (9)0.088 (10)0.055 (7)0.002 (8)0.015 (6)−0.021 (7)
C40.042 (6)0.036 (6)0.077 (8)−0.007 (5)0.000 (5)0.005 (6)
C20.076 (9)0.057 (8)0.065 (8)0.015 (7)−0.001 (6)−0.016 (7)
C60.048 (7)0.060 (8)0.075 (9)−0.014 (6)−0.006 (6)0.030 (7)
C90.051 (7)0.099 (10)0.035 (6)−0.009 (7)0.007 (4)0.005 (7)
C130.133 (13)0.059 (8)0.061 (8)0.001 (8)0.031 (8)0.006 (7)
Hg1—N22.314 (8)C3—C41.401 (15)
Hg1—N12.322 (8)C3—H3A0.9300
Hg1—Cl22.403 (3)C8—C91.359 (16)
Hg1—Cl12.414 (3)C8—C71.408 (15)
C5—C61.352 (16)C8—H8A0.9300
C5—C41.410 (15)C12—N21.378 (13)
C5—H5A0.9300C12—C71.386 (13)
N1—C11.326 (12)C7—C61.424 (15)
N1—C111.348 (12)C14—H14A0.9600
C1—C21.402 (15)C14—H14B0.9600
C1—C131.501 (15)C14—H14C0.9600
C10—N21.348 (13)C2—H2A0.9300
C10—C91.414 (15)C6—H6A0.9300
C10—C141.494 (15)C9—H9A0.9300
C11—C41.430 (14)C13—H13A0.9600
C11—C121.432 (13)C13—H13B0.9600
C3—C21.350 (16)C13—H13C0.9600
N2—Hg1—N172.1 (3)C10—N2—C12118.3 (9)
N2—Hg1—Cl2116.9 (2)C10—N2—Hg1125.9 (7)
N1—Hg1—Cl2119.9 (2)C12—N2—Hg1115.8 (6)
N2—Hg1—Cl1123.0 (2)C12—C7—C8116.1 (10)
N1—Hg1—Cl1108.5 (2)C12—C7—C6121.2 (11)
Cl2—Hg1—Cl1111.07 (13)C8—C7—C6122.6 (10)
C6—C5—C4120.5 (11)C10—C14—H14A109.5
C6—C5—H5A119.8C10—C14—H14B109.5
C4—C5—H5A119.8H14A—C14—H14B109.5
C1—N1—C11118.8 (9)C10—C14—H14C109.5
C1—N1—Hg1126.0 (7)H14A—C14—H14C109.5
C11—N1—Hg1115.2 (7)H14B—C14—H14C109.5
N1—C1—C2123.3 (10)C3—C4—C5123.1 (10)
N1—C1—C13116.8 (10)C3—C4—C11116.5 (10)
C2—C1—C13119.9 (10)C5—C4—C11120.4 (10)
N2—C10—C9120.9 (10)C3—C2—C1118.2 (11)
N2—C10—C14116.5 (10)C3—C2—H2A120.9
C9—C10—C14122.5 (10)C1—C2—H2A120.9
N1—C11—C4121.9 (9)C5—C6—C7120.3 (11)
N1—C11—C12119.7 (10)C5—C6—H6A119.8
C4—C11—C12118.4 (10)C7—C6—H6A119.8
C2—C3—C4121.4 (11)C8—C9—C10119.3 (11)
C2—C3—H3A119.3C8—C9—H9A120.3
C4—C3—H3A119.3C10—C9—H9A120.3
C9—C8—C7121.5 (11)C1—C13—H13A109.5
C9—C8—H8A119.3C1—C13—H13B109.5
C7—C8—H8A119.3H13A—C13—H13B109.5
N2—C12—C7123.7 (10)C1—C13—H13C109.5
N2—C12—C11117.1 (9)H13A—C13—H13C109.5
C7—C12—C11119.1 (10)H13B—C13—H13C109.5
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