Literature DB >> 2342066

A model for the antagonist binding site on the adenosine A1 receptor, based on steric, electrostatic, and hydrophobic properties.

P J van Galen1, H W van Vlijmen, A P IJzerman, W Soudijn.   

Abstract

With the aid of molecular modeling, both adenosine and adenosine A1 receptor antagonists belonging to various chemical classes were compared with respect to their minimum-energy conformations and molecular electrostatic potentials, as computed by the semiempirical molecular orbital program MOPAC. Distinct steric and electrostatic similarities between adenosine and the prototypic adenosine antagonist theophylline are evident when both compounds are superimposed, with theophylline in a so-called flipped orientation. Similar patterns were found for all other A1 antagonists investigated in this study. A model for the antagonist binding site on the adenosine A1 receptor, based on steric, electrostatic, and hydrophobic properties contributing to potency, is proposed.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2342066     DOI: 10.1021/jm00168a027

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  8 in total

1.  CoMFA-based comparison of two models of binding site on adenosine A1 receptor.

Authors:  I Doytchinova
Journal:  J Comput Aided Mol Des       Date:  2001-01       Impact factor: 3.686

2.  Molecular modeling of adenosine receptors. I. The ligand binding site on the A1 receptor.

Authors:  A P IJzerman; P J Van Galen; K A Jacobson
Journal:  Drug Des Discov       Date:  1992

3.  Role of the extracellular loops of G protein-coupled receptors in ligand recognition: a molecular modeling study of the human P2Y1 receptor.

Authors:  S Moro; C Hoffmann; K A Jacobson
Journal:  Biochemistry       Date:  1999-03-23       Impact factor: 3.162

Review 4.  Nomenclature and classification of purinoceptors.

Authors:  B B Fredholm; M P Abbracchio; G Burnstock; J W Daly; T K Harden; K A Jacobson; P Leff; M Williams
Journal:  Pharmacol Rev       Date:  1994-06       Impact factor: 25.468

5.  Relative binding orientations of adenosine A1 receptor ligands--a test case for Distributed Multipole Analysis in medicinal chemistry.

Authors:  E M van der Wenden; S L Price; R P Apaya; A P IJzerman; W Soudijn
Journal:  J Comput Aided Mol Des       Date:  1995-02       Impact factor: 3.686

6.  Evaluation of homology modeling of G-protein-coupled receptors in light of the A(2A) adenosine receptor crystallographic structure.

Authors:  Andrei A Ivanov; Dov Barak; Kenneth A Jacobson
Journal:  J Med Chem       Date:  2009-05-28       Impact factor: 7.446

Review 7.  Adenosine A1 and A2 receptors: structure--function relationships.

Authors:  P J van Galen; G L Stiles; G Michaels; K A Jacobson
Journal:  Med Res Rev       Date:  1992-09       Impact factor: 12.944

8.  Molecular modeling study of chiral separation and recognition mechanism of β-adrenergic antagonists by capillary electrophoresis.

Authors:  Wuhong Li; Changhai Liu; Guangguo Tan; Xinrong Zhang; Zhenyu Zhu; Yifeng Chai
Journal:  Int J Mol Sci       Date:  2012-01-11       Impact factor: 6.208

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.