Literature DB >> 23420178

Electrostatic spectral tuning mechanism of the green fluorescent protein.

Ville R I Kaila1, Robert Send, Dage Sundholm.   

Abstract

Understanding the mechanism of spectral tuning of biological chromophores is a major challenge in photobiology. We show here using large-scale full quantum chemical calculations of the green fluorescent protein that state-of-the-art coupled-cluster calculations provide accurate excitation energies and detailed insight about specific environmental effects. We obtain vertical excitation energies of 3.13 eV (396 nm) and 2.68 eV (463 nm), which are in quantitative agreement with the experimental absorption energies of 3.12 eV (397 nm) and 2.61 eV (475 nm) for the A- and B-forms of the protein. We find that the protein environment redshifts the absorption spectra by ∼0.56 eV and ∼0.22 eV for the two states, which can be attributed to ∼80% electrostatic effects and ∼20% steric effects.

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Year:  2013        PMID: 23420178     DOI: 10.1039/c3cp00058c

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  5 in total

1.  Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.

Authors:  Chi-Yun Lin; Matthew G Romei; Luke M Oltrogge; Irimpan I Mathews; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2019-09-11       Impact factor: 15.419

2.  Benchmarking the Performance of Time-Dependent Density Functional Theory Methods on Biochromophores.

Authors:  Yihan Shao; Ye Mei; Dage Sundholm; Ville R I Kaila
Journal:  J Chem Theory Comput       Date:  2019-12-26       Impact factor: 6.006

3.  Two-Photon Absorption Cross-Sections in Fluorescent Proteins Containing Non-canonical Chromophores Using Polarizable QM/MM.

Authors:  Maria Rossano-Tapia; Jógvan Magnus Haugaard Olsen; Alex Brown
Journal:  Front Mol Biosci       Date:  2020-06-12

4.  Glycine insertion modulates the fluorescence properties of Aequorea victoria green fluorescent protein and its variants in their ambient environment.

Authors:  Takamitsu J Morikawa; Masayoshi Nishiyama; Keiko Yoshizawa; Hideaki Fujita; Tomonobu M Watanabe
Journal:  Biophys Physicobiol       Date:  2021-05-21

5.  Long- and Short-Range Electrostatic Fields in GFP Mutants: Implications for Spectral Tuning.

Authors:  M Drobizhev; P R Callis; R Nifosì; G Wicks; C Stoltzfus; L Barnett; T E Hughes; P Sullivan; A Rebane
Journal:  Sci Rep       Date:  2015-08-19       Impact factor: 4.379

  5 in total

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