Literature DB >> 23408190

Histone deacetylases and their functions in plants.

Xujun Ma1, Shibo Lv, Chao Zhang, Chuanping Yang.   

Abstract

Histone deacetylases (HDACs) mediate histone deacetylation and act in concert with histone acetyltransferases to regulate dynamic and reversible histone acetylation which modifies chromatin structure and function, affects gene transcription, thus, controlling multiple cellular processes. HDACs are widely distributed in almost all eukaryotes, and there have been many researches focusing on plant HDACs recently. An increasing number of HDAC genes have been identified and characterized in a variety of plant species and the functions of certain HDACs have been studied. The present studies indicate that HDACs play a key role in regulating plant growth, development and stress responses. This paper reviews recent findings on HDACs and their functions in plants, especially their roles in development and stress responses.

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Year:  2013        PMID: 23408190     DOI: 10.1007/s00299-013-1393-6

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  92 in total

1.  Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes.

Authors:  Ritu Pandey; Andreas Müller; Carolyn A Napoli; David A Selinger; Craig S Pikaard; Eric J Richards; Judith Bender; David W Mount; Richard A Jorgensen
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

2.  Specificity of Zea mays histone deacetylase is regulated by phosphorylation.

Authors:  G Brosch; E I Georgieva; G López-Rodas; H Lindner; P Loidl
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

Review 3.  Functions of site-specific histone acetylation and deacetylation.

Authors:  Mona D Shahbazian; Michael Grunstein
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

4.  Subcellular localization of rice histone deacetylases in organelles.

Authors:  Pil Joong Chung; Youn Shic Kim; Su-Hyun Park; Baek Hie Nahm; Ju-Kon Kim
Journal:  FEBS Lett       Date:  2009-06-06       Impact factor: 4.124

5.  Purification of histone deacetylase HD1-A of germinating maize embryos.

Authors:  G Brosch; M Goralik-Schramel; P Loidl
Journal:  FEBS Lett       Date:  1996-09-16       Impact factor: 4.124

6.  Identification of maize histone deacetylase HD2 as an acidic nucleolar phosphoprotein.

Authors:  A Lusser; G Brosch; A Loidl; H Haas; P Loidl
Journal:  Science       Date:  1997-07-04       Impact factor: 47.728

7.  Type-2 histone deacetylases as new regulators of elicitor-induced cell death in plants.

Authors:  Stéphane Bourque; Agnès Dutartre; Valentin Hammoudi; Sabrina Blanc; Jennifer Dahan; Sylvain Jeandroz; Carole Pichereaux; Michel Rossignol; David Wendehenne
Journal:  New Phytol       Date:  2011-06-08       Impact factor: 10.151

8.  Requirement of Hos2 histone deacetylase for gene activity in yeast.

Authors:  Amy Wang; Siavash K Kurdistani; Michael Grunstein
Journal:  Science       Date:  2002-11-15       Impact factor: 47.728

9.  Lysine acetylation is a widespread protein modification for diverse proteins in Arabidopsis.

Authors:  Xia Wu; Man-Ho Oh; Eliezer M Schwarz; Clayton T Larue; Mayandi Sivaguru; Brian S Imai; Peter M Yau; Donald R Ort; Steven C Huber
Journal:  Plant Physiol       Date:  2011-02-10       Impact factor: 8.340

10.  Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense.

Authors:  Kang-Chang Kim; Zhibing Lai; Baofang Fan; Zhixiang Chen
Journal:  Plant Cell       Date:  2008-09-05       Impact factor: 11.277

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  41 in total

1.  Genome-Wide Mapping of Targets of Maize Histone Deacetylase HDA101 Reveals Its Function and Regulatory Mechanism during Seed Development.

Authors:  Hua Yang; Xinye Liu; Mingming Xin; Jinkun Du; Zhaorong Hu; HuiRu Peng; Vincenzo Rossi; Qixin Sun; Zhongfu Ni; Yingyin Yao
Journal:  Plant Cell       Date:  2016-02-23       Impact factor: 11.277

2.  Histone deacetylase HD2D is involved in regulating plant development and flowering time in Arabidopsis.

Authors:  Joshua Farhi; Gang Tian; Hui Fang; Denis Maxwell; Tim Xing; Lining Tian
Journal:  Plant Signal Behav       Date:  2017-07-24

Review 3.  Plant epigenetic mechanisms: role in abiotic stress and their generational heritability.

Authors:  Jebi Sudan; Meenakshi Raina; Ravinder Singh
Journal:  3 Biotech       Date:  2018-03-10       Impact factor: 2.406

4.  Unique miRNome during anthesis in drought-tolerant indica rice var. Nagina 22.

Authors:  Shivani Kansal; Roseeta Devi Mutum; Roseeta M Devi; Sonia C Balyan; Mukesh K Arora; Ashok Kumar Singh; Anil K Singh; Saloni Mathur; Saurabh Raghuvanshi
Journal:  Planta       Date:  2015-03-26       Impact factor: 4.116

Review 5.  Epigenome editing: targeted manipulation of epigenetic modifications in plants.

Authors:  Hosub Shin; Woo Lee Choi; Joo Young Lim; Jin Hoe Huh
Journal:  Genes Genomics       Date:  2022-01-09       Impact factor: 1.839

Review 6.  HD2-type histone deacetylases: unique regulators of plant development and stress responses.

Authors:  Muhammad Sufyan Tahir; Lining Tian
Journal:  Plant Cell Rep       Date:  2021-05-26       Impact factor: 4.570

7.  High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns in Arabidopsis and rice.

Authors:  Li Lu; Xiangsong Chen; Dean Sanders; Shuiming Qian; Xuehua Zhong
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

8.  The Distinct Roles of Class I and II RPD3-Like Histone Deacetylases in Salinity Stress Response.

Authors:  Minoru Ueda; Akihiro Matsui; Maho Tanaka; Tomoe Nakamura; Takahiro Abe; Kaori Sako; Taku Sasaki; Jong-Myong Kim; Akihiro Ito; Norikazu Nishino; Hiroaki Shimada; Minoru Yoshida; Motoaki Seki
Journal:  Plant Physiol       Date:  2017-10-10       Impact factor: 8.340

9.  The histone deubiquitinase OTLD1 targets euchromatin to regulate plant growth.

Authors:  Ido Keren; Vitaly Citovsky
Journal:  Sci Signal       Date:  2016-12-20       Impact factor: 9.517

10.  An RNA-seq transcriptome analysis of histone modifiers and RNA silencing genes in soybean during floral initiation process.

Authors:  Lim Chee Liew; Mohan B Singh; Prem L Bhalla
Journal:  PLoS One       Date:  2013-10-16       Impact factor: 3.240

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