Literature DB >> 23408125

Pareto genealogies arising from a Poisson branching evolution model with selection.

Thierry E Huillet1.   

Abstract

We study a class of coalescents derived from a sampling procedure out of N i.i.d. Pareto(α) random variables, normalized by their sum, including β-size-biasing on total length effects (β < α). Depending on the range of α we derive the large N limit coalescents structure, leading either to a discrete-time Poisson-Dirichlet (α, -β) Ξ-coalescent (α ε[0, 1)), or to a family of continuous-time Beta (2 - α, α - β)Λ-coalescents (α ε[1, 2)), or to the Kingman coalescent (α ≥ 2). We indicate that this class of coalescent processes (and their scaling limits) may be viewed as the genealogical processes of some forward in time evolving branching population models including selection effects. In such constant-size population models, the reproduction step, which is based on a fitness-dependent Poisson Point Process with scaling power-law(α) intensity, is coupled to a selection step consisting of sorting out the N fittest individuals issued from the reproduction step.

Mesh:

Year:  2013        PMID: 23408125     DOI: 10.1007/s00285-013-0649-7

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  6 in total

1.  On the extended Moran model and its relation to coalescents with multiple collisions.

Authors:  Thierry Huillet; Martin Möhle
Journal:  Theor Popul Biol       Date:  2011-10-01       Impact factor: 1.570

2.  DIRECT PRODUCT BRANCHING PROCESSES AND RELATED MARKOV CHAINS.

Authors:  S Karlin; J McGregor
Journal:  Proc Natl Acad Sci U S A       Date:  1964-04       Impact factor: 11.205

3.  Coalescent processes when the distribution of offspring number among individuals is highly skewed.

Authors:  Bjarki Eldon; John Wakeley
Journal:  Genetics       Date:  2006-02-01       Impact factor: 4.562

4.  Effect of selection on ancestry: an exactly soluble case and its phenomenological generalization.

Authors:  E Brunet; B Derrida; A H Mueller; S Munier
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-10-03

5.  On the length distribution of external branches in coalescence trees: genetic diversity within species.

Authors:  Amke Caliebe; Ralph Neininger; Michael Krawczak; Uwe Rösler
Journal:  Theor Popul Biol       Date:  2007-06-15       Impact factor: 1.570

6.  Computing likelihoods for coalescents with multiple collisions in the infinitely many sites model.

Authors:  Matthias Birkner; Jochen Blath
Journal:  J Math Biol       Date:  2008-03-18       Impact factor: 2.259

  6 in total
  1 in total

1.  The Site Frequency Spectrum for General Coalescents.

Authors:  Jeffrey P Spence; John A Kamm; Yun S Song
Journal:  Genetics       Date:  2016-02-16       Impact factor: 4.562

  1 in total

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