Literature DB >> 23406161

Carbonyl sulfide hydrolase from Thiobacillus thioparus strain THI115 is one of the β-carbonic anhydrase family enzymes.

Takahiro Ogawa1, Keiichi Noguchi, Masahiko Saito, Yoshiko Nagahata, Hiromi Kato, Akashi Ohtaki, Hiroshi Nakayama, Naoshi Dohmae, Yasuhiko Matsushita, Masafumi Odaka, Masafumi Yohda, Hiroshi Nyunoya, Yoko Katayama.   

Abstract

Carbonyl sulfide (COS) is an atmospheric trace gas leading to sulfate aerosol formation, thereby participating in the global radiation balance and ozone chemistry, but its biological sinks are not well understood. Thiobacillus thioparus strain THI115 can grow on thiocyanate (SCN(-)) as its sole energy source. Previously, we showed that SCN(-) is first converted to COS by thiocyanate hydrolase in T. thioparus strain THI115. In the present work, we purified, characterized, and determined the crystal structure of carbonyl sulfide hydrolase (COSase), which is responsible for the degradation of COS to H2S and CO2, the second step of SCN(-) assimilation. COSase is a homotetramer composed of a 23.4 kDa subunit containing a zinc ion in its catalytic site. The amino acid sequence of COSase is homologous to the β-class carbonic anhydrases (β-CAs). Although the crystal structure including the catalytic site resembles those of the β-CAs, CO2 hydration activity of COSase is negligible compared to those of the β-CAs. The α5 helix and the extra loop (Gly150-Pro158) near the N-terminus of the α6 helix narrow the substrate pathway, which could be responsible for the substrate specificity. The k(cat)/K(m) value, 9.6 × 10(5) s(-1) M(-1), is comparable to those of the β-CAs. COSase hydrolyzes COS over a wide concentration range, including the ambient level, in vitro and in vivo. COSase and its structurally related enzymes are distributed in the clade D in the phylogenetic tree of β-CAs, suggesting that COSase and its related enzymes are one of the catalysts responsible for the global sink of COS.

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Year:  2013        PMID: 23406161     DOI: 10.1021/ja307735e

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

Review 1.  Emerging Roles of Carbonyl Sulfide in Chemical Biology: Sulfide Transporter or Gasotransmitter?

Authors:  Andrea K Steiger; Yu Zhao; Michael D Pluth
Journal:  Antioxid Redox Signal       Date:  2017-05-18       Impact factor: 8.401

2.  α-Carbonic Anhydrases Possess Thioesterase Activity.

Authors:  Muhammet Tanc; Fabrizio Carta; Andrea Scozzafava; Claudiu T Supuran
Journal:  ACS Med Chem Lett       Date:  2015-01-19       Impact factor: 4.345

3.  Bacterial CS2 hydrolases from Acidithiobacillus thiooxidans strains are homologous to the archaeal catenane CS2 hydrolase.

Authors:  Marjan J Smeulders; Arjan Pol; Hanka Venselaar; Thomas R M Barends; John Hermans; Mike S M Jetten; Huub J M Op den Camp
Journal:  J Bacteriol       Date:  2013-07-08       Impact factor: 3.490

4.  Sources and sinks of carbonyl sulfide in an agricultural field in the Southern Great Plains.

Authors:  Kadmiel Maseyk; Joseph A Berry; Dave Billesbach; John Elliott Campbell; Margaret S Torn; Mark Zahniser; Ulli Seibt
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-09       Impact factor: 11.205

5.  Soil carbonyl sulfide exchange in relation to microbial community composition: insights from a managed grassland soil amendment experiment.

Authors:  Florian Kitz; María Gómez-Brandón; Bernhard Eder; Mohammad Etemadi; Felix M Spielmann; Albin Hammerle; Heribert Insam; Georg Wohlfahrt
Journal:  Soil Biol Biochem       Date:  2019-04-12       Impact factor: 7.609

Review 6.  The hydrolysis of carbonyl sulfide at low temperature: a review.

Authors:  Shunzheng Zhao; Honghong Yi; Xiaolong Tang; Shanxue Jiang; Fengyu Gao; Bowen Zhang; Yanran Zuo; Zhixiang Wang
Journal:  ScientificWorldJournal       Date:  2013-07-15

7.  Low temperature, autotrophic microbial denitrification using thiosulfate or thiocyanate as electron donor.

Authors:  Elias Broman; Abbtesaim Jawad; Xiaofen Wu; Stephan Christel; Gaofeng Ni; Margarita Lopez-Fernandez; Jan-Eric Sundkvist; Mark Dopson
Journal:  Biodegradation       Date:  2017-06-02       Impact factor: 3.909

8.  Analysis of the Genes Involved in Thiocyanate Oxidation during Growth in Continuous Culture of the Haloalkaliphilic Sulfur-Oxidizing Bacterium Thioalkalivibrio thiocyanoxidans ARh 2T Using Transcriptomics.

Authors:  Tom Berben; Cherel Balkema; Dimitry Y Sorokin; Gerard Muyzer
Journal:  mSystems       Date:  2017-12-26       Impact factor: 6.496

9.  The interaction of soil phototrophs and fungi with pH and their impact on soil CO2, CO18O and OCS exchange.

Authors:  Joana Sauze; Jérôme Ogée; Pierre-Alain Maron; Olivier Crouzet; Virginie Nowak; Steven Wohl; Aurore Kaisermann; Sam P Jones; Lisa Wingate
Journal:  Soil Biol Biochem       Date:  2017-12       Impact factor: 7.609

10.  Isotopic Fractionation of Sulfur in Carbonyl Sulfide by Carbonyl Sulfide Hydrolase of Thiobacillus thioparus THI115.

Authors:  Takahiro Ogawa; Shohei Hattori; Kazuki Kamezaki; Hiromi Kato; Naohiro Yoshida; Yoko Katayama
Journal:  Microbes Environ       Date:  2017-12-02       Impact factor: 2.912

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