Literature DB >> 31579268

Soil carbonyl sulfide exchange in relation to microbial community composition: insights from a managed grassland soil amendment experiment.

Florian Kitz1, María Gómez-Brandón2, Bernhard Eder2, Mohammad Etemadi2, Felix M Spielmann1, Albin Hammerle1, Heribert Insam2, Georg Wohlfahrt1.   

Abstract

The viability of carbonyl sulfide (COS) measurements for partitioning ecosystem-scale net carbon dioxide (CO2) fluxes into photosynthesis and respiration critically depends on our knowledge of non-leaf sinks and sources of COS in ecosystems. We combined soil gas exchange measurements of COS and CO2 with next-generation sequencing technology (NGS) to investigate the role of soil microbiota for soil COS exchange. We applied different treatments (litter and glucose addition, enzyme inhibition and gamma sterilization) to soil samples from a temperate grassland to manipulate microbial composition and activity. While untreated soil was characterized by consistent COS uptake, other treatments reduced COS uptake and even turned the soil into a net COS source. Removing biotic processes through sterilization led to positive or zero fluxes. We used NGS to link changes in the COS response to alterations in the microbial community composition, with bacterial data having a higher explanatory power for the measured COS fluxes than fungal data. We found that the genera Arthrobacter and Streptomyces were particularly abundant in samples exhibiting high COS emissions. Our results indicate co-occurring abiotic production and biotic consumption of COS in untreated soil, the latter linked to carbonic anhydrase activity, and a strong dependency of the COS flux on the activity, identity, abundance of and substrate available to microorganisms.

Entities:  

Keywords:  NGS; carbonyl sulfide; gas exchange measurements; microbial community composition

Year:  2019        PMID: 31579268      PMCID: PMC6774760          DOI: 10.1016/j.soilbio.2019.04.005

Source DB:  PubMed          Journal:  Soil Biol Biochem        ISSN: 0038-0717            Impact factor:   7.609


  47 in total

Review 1.  Growth of saprotrophic fungi and bacteria in soil.

Authors:  Johannes Rousk; Erland Bååth
Journal:  FEMS Microbiol Ecol       Date:  2011-04-28       Impact factor: 4.194

Review 2.  Emerging Roles of Carbonyl Sulfide in Chemical Biology: Sulfide Transporter or Gasotransmitter?

Authors:  Andrea K Steiger; Yu Zhao; Michael D Pluth
Journal:  Antioxid Redox Signal       Date:  2017-05-18       Impact factor: 8.401

3.  A novel pathway producing dimethylsulphide in bacteria is widespread in soil environments.

Authors:  O Carrión; A R J Curson; D Kumaresan; Y Fu; A S Lang; E Mercadé; J D Todd
Journal:  Nat Commun       Date:  2015-03-25       Impact factor: 14.919

Review 4.  Structure and mechanism of carbonic anhydrase.

Authors:  S Lindskog
Journal:  Pharmacol Ther       Date:  1997       Impact factor: 12.310

5.  Biodegradation of thiocyanate using co-culture of Klebsiella pneumoniae and Ralstonia sp.

Authors:  Ashvini U Chaudhari; Kisan M Kodam
Journal:  Appl Microbiol Biotechnol       Date:  2009-10-17       Impact factor: 4.813

6.  Dual influence of the carbon source and L-methionine on the synthesis of sulphur compounds in the cheese-ripening yeast Geotrichum candidum.

Authors:  K Arfi; R Tâche; H E Spinnler; P Bonnarme
Journal:  Appl Microbiol Biotechnol       Date:  2003-02-11       Impact factor: 4.813

7.  Degradation of ambient carbonyl sulfide by Mycobacterium spp. in soil.

Authors:  Hiromi Kato; Masahiko Saito; Yoshiko Nagahata; Yoko Katayama
Journal:  Microbiology       Date:  2008-01       Impact factor: 2.777

8.  Carbonyl sulfide and carbon dioxide as new substrates, and carbon disulfide as a new inhibitor, of nitrogenase.

Authors:  L C Seefeldt; M E Rasche; S A Ensign
Journal:  Biochemistry       Date:  1995-04-25       Impact factor: 3.162

9.  Shiny-phyloseq: Web application for interactive microbiome analysis with provenance tracking.

Authors:  Paul J McMurdie; Susan Holmes
Journal:  Bioinformatics       Date:  2014-09-26       Impact factor: 6.937

10.  Methane and nitrous oxide exchange over a managed hay meadow.

Authors:  L Hörtnagl; G Wohlfahrt
Journal:  Biogeosciences       Date:  2014-12-17       Impact factor: 4.295

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  1 in total

1.  Feasibility Study on the Application of Microbial Agent Modified Water-Jet Loom Sludge for the Restoration of Degraded Soil in Mining Areas.

Authors:  Chuning Ji; Jiu Huang; Yu Tian; Ying Liu; Joshua Bosco Barvor; Xintong Shao; Zi'ao Li
Journal:  Int J Environ Res Public Health       Date:  2021-06-24       Impact factor: 3.390

  1 in total

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