| Literature DB >> 23399458 |
James B Kirkbride1, Daniel Jackson, Jesus Perez, David Fowler, Francis Winton, Jeremy W Coid, Robin M Murray, Peter B Jones.
Abstract
OBJECTIVES: Specialist early intervention services (EIS) for people aged 14-35 years with first episodes of psychosis (FEP) have been commissioned throughout England since 2001. A single estimate of population need was used everywhere, but true incidence varies enormously according to sociodemographic factors. We sought to develop a realistically complex, population-based prediction tool for FEP, based on precise estimates of epidemiological risk. DESIGN AND PARTICIPANTS: Data from 1037 participants in two cross-sectional population-based FEP studies were fitted to several negative binomial regression models to estimate risk coefficients across combinations of different sociodemographic and socioenvironmental factors. We applied these coefficients to the population at-risk of a third, socioeconomically different region to predict expected caseload over 2.5 years, where the observed rates of ICD-10 F10-39 FEP had been concurrently ascertained via EIS.Entities:
Year: 2013 PMID: 23399458 PMCID: PMC3585967 DOI: 10.1136/bmjopen-2012-001998
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
Description of included socioenvironmental variables*†
| Variable | Classification and description |
|---|---|
| Multiple deprivation | Weighted data from routine national sources across seven domains: income, employment, education, health, barriers to housing and services, living environment, crime. Continuous, z-standardised scores for analysis |
| Extent of deprivation | Proportion of LAD population living in 20% most deprived SOA in England (%) |
| Income deprivation | Proportion of all people in LAD classified as income deprived (%) |
| Employment deprivation | Proportion of adults of working age in LAD classified as employment deprived (%) |
| Population density | Population density at LAD level (people per hectare) |
*Prediction sample sources: Population density—2001 census estimates; deprivation variables: 2004 Indices of Deprivation, predominantly collected from data sources close to ÆSOP and ELFEP case ascertainment periods (ie, 1997–2000).
†Validation sample sources: Population density—2009 mid-year census estimates; deprivation variables: 2010 Indices of Deprivation, predominantly collected from data sources just prior to the SEPEA case ascertainment period (2008).
IMD, Index of Multiple Deprivation; LAD, local authority district; SOA, super output area.
Prediction models, covariates and fit: all clinically relevant psychoses (F10–39)
| Model 1 | Model 2 | Model 3 | Model 4 | Model 5 | Model 6 | |
|---|---|---|---|---|---|---|
| Variable | IRR (95% CI) | IRR (95% CI) | IRR (95% CI) | IRR (95% CI) | IRR (95% CI) | IRR (95% CI) |
| Age group×sex interaction* | p=0.07 | p=0.06 | p=0.06 | p=0.06 | p=0.06 | p=0.06 |
| Ethnicity | ||||||
| White British | 1 | 1 | 1 | 1 | 1 | 1 |
| Non-British white | 2.0 (1.5 to 2.5) | 1.7 (1.4 to 2.2) | 1.7 (1.3 to 2.2) | 1.7 (1.3 to 2.2) | 1.8 (1.4 to 2.3) | 1.7 (1.3 to 2.2) |
| Black Caribbean | 6.0 (4.9 to 7.3) | 5.3 (4.3 to 6.5) | 5.2 (4.3 to 6.4) | 5.2 (4.3 to 6.4) | 5.4 (4.5 to 6.6) | 5.1 (4.2 to 6.3) |
| Black African | 4.1 (3.3 to 5.1) | 3.6 (2.9 to 4.5) | 3.5 (2.8 to 4.4) | 3.5 (2.8 to 4.4) | 3.7 (3.0 to 4.6) | 3.5 (2.8 to 4.3) |
| Indian | 1.7 (1.2 to 2.5) | 1.5 (1.1 to 2.2) | 1.5 (1.0 to 2.2) | 1.5 (1.0 to 2.1) | 1.6 (1.1 to 2.3) | 1.6 (1.1 to 2.2) |
| Pakistani | 1.8 (1.2 to 2.5) | 1.6 (1.0 to 2.5) | 1.6 (1.0 to 2.4) | 1.6 (1.0 to 2.4) | 1.6 (1.1 to 2.5) | 1.8 (1.3 to 2.7) |
| Bangladeshi | 2.1 (1.5 to 2.8) | 1.7 (1.2 to 2.3) | 1.7 (1.2 to 2.3) | 1.6 (1.2 to 2.2) | 1.8 (1.3 to 2.5) | 1.8 (1.4 to 2.4) |
| Mixed white and black Caribbean | 4.3 (2.8 to 6.7) | 3.9 (2.5 to 6.0) | 3.9 (2.5 to 6.0) | 3.9 (2.5 to 6.0) | 4.0 (2.6 to 6.1) | 3.9 (2.5 to 6.1) |
| Mixed, other ethnicities | 1.3 (0.8 to 2.3) | 1.2 (0.7 to 2.1) | 1.2 (0.7 to 2.1) | 1.2 (0.7 to 2.1) | 1.2 (0.7 to 2.1) | 1.2 (0.7 to 2.1) |
| Other ethnicities | 2.2 (1.6 to 3.0) | 1.9 (1.4 to 2.7) | 1.9 (1.4 to 2.6) | 1.9 (1.4 to 2.6) | 2.0 (1.4 to 2.7) | 1.9 (1.4 to 2.7) |
| Socioenvironmental variables | ||||||
| IMD (z-score) | – | 1.184 (1.101 to 1.274) | – | – | – | – |
| Extent of deprivation (%) | – | – | 1.008 (1.004 to 1.011) | – | – | – |
| Income deprivation (%) | – | – | – | 1.025 (1.015 to 1.035) | – | – |
| Employment deprivation (%) | – | – | – | – | 1.062 (1.032 to 1.093) | – |
| Population density (pph) | – | – | – | – | – | 1.005 (1.003 to 1.007) |
| Model-fit diagnostics | ||||||
| AIC† | 2571.8 | 2552.4 | 2551.3 | 2549.6 | 2556.4 | 2556.3 |
| Mean Lin's CCC (95% CI)‡ | 0.75 (0.74 to 0.77) | 0.77 (0.75 to 0.78) | 0.77 (0.75 to 0.79) | 0.77 (0.75 to 0.78) | 0.77 (0.75 to 0.78) | 0.76 (0.74 to 0.77) |
| Mean RMSE (SD)§ | 0.75 (0.11) | 0.74 (0.11) | 0.74 (0.10) | 0.74 (0.10) | 0.74 (0.11) | 0.76 (0.13) |
*All models fitted with age group by sex interaction given a priori evidence for effect modification.18 45 Likelihood ratio test p values reported between models with and without an interaction term fitted between age group and sex. Specific IRR has not been reported for clarity, but is available on request.
†Lower scores denote improved model fit.
‡Higher scores indicate greater correlation between observed and predicted count of cases in the prediction sample. Mean CCC and 95%CI reported following h=20 trials during cross-validation.
§Lower scores indicate lower prediction error. Mean RMSE and SD reported following h=20 repeats of K-fold cross-validation, where K=10.
AIC, Akaike's Information Criterion; CCC, Lin's correlation concordance coefficient; IRR, incidence rate ratio; RMSE, root mean squared error.
Observed versus predicted cases in Social Epidemiology of Psychoses in East Anglia study for all clinically relevant psychoses, 16–35 years*
| EIS | Observed | Predicted (95% PI) | Predicted (95% PI) | Predicted (95% PI) | Predicted (95% PI) |
|---|---|---|---|---|---|
| Model 1 | Model 2 | Model 3 | Model 4 | ||
| Overall total, 16–35 years | 522 | 641.2 (586.0, 696.1) | 468.5 (422.0, 518.0) | ||
| CAMEO North | 55 | 84.7 (66.0, 106.0) | |||
| CAMEO South | 134 | 163.6 (135.0, 192.0) | 105.5 (84.0, 129.0) | 110.9 (90.0, 132.0) | |
| West Norfolk | 26 | ||||
| Central Norfolk | 120 | 162.6 (136.0, 191.0) | |||
| Great Yarmouth and Waveney | 60 | 41.6 (28.0, 55.0) | 39.9 (27.0, 53.0) | 42.9 (30.0, 57.0) | |
| Suffolk | 127 | ||||
| Overall total, 36–64 years | – | 332.2 (292.0, 373.0) | 244.0 (213.0, 276.0) | 248.6 (216.0, 280.0) | 256.3 (228.0, 291.0) |
| Overall total, 16–35 years | 522 | 715.6 (664.0, 769.0) | |||
| CAMEO North | 55 | 92.1 (74.0, 111.0) | |||
| CAMEO South | 134 | 100.7 (79.0, 123.0) | 169.0 (144.0, 195.0) | ||
| West Norfolk | 26 | ||||
| Central Norfolk | 120 | 187.7 (161.0, 215.0) | |||
| Great Yarmouth and Waveney | 60 | 38.0 (26.0, 51.0) | |||
| Suffolk | 127 | 172.1 (147.0, 198.0) | |||
| Overall total, 36–64 years | 249.7 (221.0, 284.0) | 262.9 (233.0, 297.0) | 1175.4 (1109.0, 1243.0) |
*Numbers in italics denote where the observed count fell within 95% prediction interval (95% PI) for people aged 16–35 years. Observed data for people aged 36–64 years in the validation sample were not available.
Model 1: Age group, sex, their interaction and ethnicity.
Model 2: Model 1+IMD.
Model 3: Model 1+extent of deprivation.
Model 4: Model 1+income deprivation.
Model 5: Model 1+employment deprivation.
Model 6: Model 1+population density.
Model 7: Department of health uniform figure for EIS of 15 new cases per 100 000 people/year.
External model validation diagnostics*
| Model | Observed case count within SEPEA overall prediction intervals? (rank) | EIS (N=6) | LAD (N=21) | Mean ranking (rank of mean ranking) | ||
|---|---|---|---|---|---|---|
| Number correct (rank) | RMSE (rank) | Number correct (rank) | RMSE (rank) | |||
| Model 1 | No (5) | 3 (6) | 26.9 (6) | 18 (2) | 8.9 (6) | 5.0 (6) |
| Model 2 | No (5) | 4 (4) | 17.0 (4) | 18 (2) | 6.5 (4) | 4.8 (5) |
| Model 3 | Yes (1) | 5 (1) | 15.1 (2) | 17 (5) | 6.2 (3) | 2.4 (2) |
| Model 4 | Yes (1) | 4 (4) | 15.1 (2) | 17 (5) | 6.1 (1) | 2.6 (3) |
| Model 5 | Yes (1) | 5 (1) | 18.0 (5) | 18 (2) | 6.7 (5) | 2.8 (4) |
| Model 6 | Yes (1) | 5 (1) | 11.6 (1) | 19 (1) | 6.1 (1) | 1.0 (1) |
| Model 7 | No (5) | 2 (7) | 39.4 (7) | 13 (7) | 11.7 (7) | 6.6 (7) |
*For each diagnostic, models are placed in rank order (1=best model, 7=worst model) with ties given the same ranking. The mean ranking and rank provide an estimate of the overall performance of various models.
EIS, early intervention services; LAD, local authority district; RMSE, root mean squared error; SEPEA, Social Epidemiology of Psychoses in East Anglia.