Literature DB >> 23393426

Starch metabolism in Arabidopsis.

Sebastian Streb1, Samuel C Zeeman.   

Abstract

Starch is the major non-structural carbohydrate in plants. It serves as an important store of carbon that fuels plant metabolism and growth when they are unable to photosynthesise. This storage can be in leaves and other green tissues, where it is degraded during the night, or in heterotrophic tissues such as roots, seeds and tubers, where it is stored over longer time periods. Arabidopsis accumulates starch in many of its tissues, but mostly in its leaves during the day. It has proven to be a powerful genetic system for discovering how starch is synthesised and degraded, and new proteins and processes have been discovered. Such work has major significance for our starch crops, whose yield and quality could be improved by the application of this knowledge. Research into Arabidopsis starch metabolism has begun to reveal how its daily turnover is integrated into the rest of metabolism and adapted to the environmental conditions. Furthermore, Arabidopsis mutant lines deficient in starch metabolism have been employed as tools to study other biological processes ranging from sugar sensing to gravitropism and flowering time control. This review gives a detailed account of the use of Arabidopsis to study starch metabolism. It describes the major discoveries made and presents an overview of our understanding today, together with some as-yet unresolved questions.

Entities:  

Year:  2012        PMID: 23393426      PMCID: PMC3527087          DOI: 10.1199/tab.0160

Source DB:  PubMed          Journal:  Arabidopsis Book        ISSN: 1543-8120


  243 in total

1.  The ram1 mutant of Arabidopsis exhibits severely decreased beta-amylase activity.

Authors:  R J Laby; D Kim; S I Gibson
Journal:  Plant Physiol       Date:  2001-12       Impact factor: 8.340

2.  Identification of a novel enzyme required for starch metabolism in Arabidopsis leaves. The phosphoglucan, water dikinase.

Authors:  Oliver Kötting; Kerstin Pusch; Axel Tiessen; Peter Geigenberger; Martin Steup; Gerhard Ritte
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

3.  Mutations in the gene encoding starch synthase II profoundly alter amylopectin structure in pea embryos.

Authors:  J Craig; J R Lloyd; K Tomlinson; L Barber; A Edwards; T L Wang; C Martin; C L Hedley; A M Smith
Journal:  Plant Cell       Date:  1998-03       Impact factor: 11.277

4.  Soluble starch synthase I: a major determinant for the synthesis of amylopectin in Arabidopsis thaliana leaves.

Authors:  David Delvallé; Sylvain Dumez; Fabrice Wattebled; Isaac Roldán; Véronique Planchot; Pierre Berbezy; Paul Colonna; Darshna Vyas; Manash Chatterjee; Steven Ball; Angel Mérida; Christophe D'Hulst
Journal:  Plant J       Date:  2005-08       Impact factor: 6.417

5.  beta-Maltose is the metabolically active anomer of maltose during transitory starch degradation.

Authors:  Sean E Weise; Kirsten S Kim; Robert P Stewart; Thomas D Sharkey
Journal:  Plant Physiol       Date:  2005-01-21       Impact factor: 8.340

6.  Molecular characterisation of a new mutant allele of the plastid phosphoglucomutase in Arabidopsis, and complementation of the mutant with the wild-type cDNA.

Authors:  H Kofler; R E Häusler; B Schulz; F Gröner; U I Flügge; A Weber
Journal:  Mol Gen Genet       Date:  2000-07

7.  Involvement of alpha-amylase I-1 in starch degradation in rice chloroplasts.

Authors:  Satoru Asatsuma; Chihoko Sawada; Kimiko Itoh; Mitsutoshi Okito; Aya Kitajima; Toshiaki Mitsui
Journal:  Plant Cell Physiol       Date:  2005-04-08       Impact factor: 4.927

8.  Function and characterization of starch synthase I using mutants in rice.

Authors:  Naoko Fujita; Mayumi Yoshida; Noriko Asakura; Takashi Ohdan; Akio Miyao; Hirohiko Hirochika; Yasunori Nakamura
Journal:  Plant Physiol       Date:  2006-01-27       Impact factor: 8.340

9.  Mutation of the plastidial alpha-glucan phosphorylase gene in rice affects the synthesis and structure of starch in the endosperm.

Authors:  Hikaru Satoh; Kensuke Shibahara; Takashi Tokunaga; Aiko Nishi; Mikako Tasaki; Seon-Kap Hwang; Thomas W Okita; Nanae Kaneko; Naoko Fujita; Mayumi Yoshida; Yuko Hosaka; Aya Sato; Yoshinori Utsumi; Takashi Ohdan; Yasunori Nakamura
Journal:  Plant Cell       Date:  2008-07-11       Impact factor: 11.277

10.  The two plastidial starch-related dikinases sequentially phosphorylate glucosyl residues at the surface of both the A- and B-type allomorphs of crystallized maltodextrins but the mode of action differs.

Authors:  Mahdi Hejazi; Joerg Fettke; Oskar Paris; Martin Steup
Journal:  Plant Physiol       Date:  2009-04-24       Impact factor: 8.340

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  103 in total

1.  Regulation of Leaf Starch Degradation by Abscisic Acid Is Important for Osmotic Stress Tolerance in Plants.

Authors:  Matthias Thalmann; Diana Pazmino; David Seung; Daniel Horrer; Arianna Nigro; Tiago Meier; Katharina Kölling; Hartwig W Pfeifhofer; Samuel C Zeeman; Diana Santelia
Journal:  Plant Cell       Date:  2016-07-19       Impact factor: 11.277

2.  Modeling the Metabolism of Arabidopsis thaliana: Application of Network Decomposition and Network Reduction in the Context of Petri Nets.

Authors:  Ina Koch; Joachim Nöthen; Enrico Schleiff
Journal:  Front Genet       Date:  2017-06-30       Impact factor: 4.599

3.  A new mechanism for starch dephosphorylation: insight from the structure of like sex four2.

Authors:  Nancy R Hofmann
Journal:  Plant Cell       Date:  2013-06-28       Impact factor: 11.277

4.  Gene Regulation and Survival under Hypoxia Requires Starch Availability and Metabolism.

Authors:  Elena Loreti; Maria Cristina Valeri; Giacomo Novi; Pierdomenico Perata
Journal:  Plant Physiol       Date:  2017-10-30       Impact factor: 8.340

Review 5.  Dancing in the dark: darkness as a signal in plants.

Authors:  Adam Seluzicki; Yogev Burko; Joanne Chory
Journal:  Plant Cell Environ       Date:  2017-02-23       Impact factor: 7.228

6.  Photoperiodic control of carbon distribution during the floral transition in Arabidopsis.

Authors:  M Isabel Ortiz-Marchena; Tomás Albi; Eva Lucas-Reina; Fatima E Said; Francisco J Romero-Campero; Beatriz Cano; M Teresa Ruiz; José M Romero; Federico Valverde
Journal:  Plant Cell       Date:  2014-02-21       Impact factor: 11.277

7.  The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth.

Authors:  Spencer Diamond; Darae Jun; Benjamin E Rubin; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-30       Impact factor: 11.205

Review 8.  Transitory Starch Metabolism in Guard Cells: Unique Features for a Unique Function.

Authors:  Diana Santelia; John E Lunn
Journal:  Plant Physiol       Date:  2017-03-14       Impact factor: 8.340

9.  Nighttime sugar starvation orchestrates gibberellin biosynthesis and plant growth in Arabidopsis.

Authors:  Eleonora Paparelli; Sandro Parlanti; Silvia Gonzali; Giacomo Novi; Lorenzo Mariotti; Nello Ceccarelli; Joost T van Dongen; Katharina Kölling; Samuel C Zeeman; Pierdomenico Perata
Journal:  Plant Cell       Date:  2013-10-04       Impact factor: 11.277

10.  Genetic Evidence That Chain Length and Branch Point Distributions Are Linked Determinants of Starch Granule Formation in Arabidopsis.

Authors:  Barbara Pfister; Kuan-Jen Lu; Simona Eicke; Regina Feil; John E Lunn; Sebastian Streb; Samuel C Zeeman
Journal:  Plant Physiol       Date:  2014-06-25       Impact factor: 8.340

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