Literature DB >> 23385754

Crystallization and preliminary diffraction analysis of the catalytic domain of major extracellular endoglucanase from Xanthomonas campestris pv. campestris.

Flávio R Rosseto1, Ana C Puhl, Maxuel O Andrade, Igor Polikarpov.   

Abstract

Cellulases, such as endoglucanases, exoglucanases and β-glucosidases, are important enzymes used in the process of enzymatic hydrolysis of plant biomass. The bacteria Xanthomonas campestris pv. campestris expresses a large number of hydrolases and the major endoglucanase (XccEG), a member of glycoside hydrolase family 5 (GH5), is the most strongly secreted extracellularly. In this work, the native XccEG was purified from the extracellular extract and crystallization assays were performed on its catalytic domain. A complete data set was collected on an in-house X-ray source. The crystal diffracted to 2.7 Å resolution and belonged to space group C2, with unit-cell parameters a = 174.66, b = 141.53, c = 108.00 Å, β = 110.49°. The Matthews coefficient suggests a solvent content of 70.1% and the presence of four protein subunits in the asymmetric unit.

Entities:  

Keywords:  Xanthomonas campestris pv. campestris; cellulases; endoglucanases

Mesh:

Substances:

Year:  2013        PMID: 23385754      PMCID: PMC3564615          DOI: 10.1107/S1744309112051408

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

Review 1.  Comparative genomic analysis of plant-associated bacteria.

Authors:  M A Van Sluys; C B Monteiro-Vitorello; L E A Camargo; C F M Menck; A C R Da Silva; J A Ferro; M C Oliveira; J C Setubal; J P Kitajima; A J Simpson
Journal:  Annu Rev Phytopathol       Date:  2002-05-13       Impact factor: 13.078

2.  SignalP 4.0: discriminating signal peptides from transmembrane regions.

Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

3.  The crystal structure of the catalytic core domain of endoglucanase I from Trichoderma reesei at 3.6 A resolution, and a comparison with related enzymes.

Authors:  G J Kleywegt; J Y Zou; C Divne; G J Davies; I Sinning; J Stâhlberg; T Reinikainen; M Srisodsuk; T T Teeri; T A Jones
Journal:  J Mol Biol       Date:  1997-09-26       Impact factor: 5.469

4.  Production and characterization of cellulolytic enzymes from the thermoacidophilic fungal Aspergillus terreus M11 under solid-state cultivation of corn stover.

Authors:  Jianmin Gao; Haibo Weng; Daheng Zhu; Mingxue Yuan; Fangxia Guan; Yu Xi
Journal:  Bioresour Technol       Date:  2008-03-17       Impact factor: 9.642

Review 5.  Domains in microbial beta-1, 4-glycanases: sequence conservation, function, and enzyme families.

Authors:  N R Gilkes; B Henrissat; D G Kilburn; R C Miller; R A Warren
Journal:  Microbiol Rev       Date:  1991-06

6.  Nucleotide sequence of the engXCA gene encoding the major endoglucanase of Xanthomonas campestris pv. campestris.

Authors:  C L Gough; J M Dow; J Keen; B Henrissat; M J Daniels
Journal:  Gene       Date:  1990-04-30       Impact factor: 3.688

7.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

8.  The Pfam protein families database.

Authors:  Robert D Finn; Jaina Mistry; John Tate; Penny Coggill; Andreas Heger; Joanne E Pollington; O Luke Gavin; Prasad Gunasekaran; Goran Ceric; Kristoffer Forslund; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman
Journal:  Nucleic Acids Res       Date:  2009-11-17       Impact factor: 16.971

Review 9.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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