| Literature DB >> 23384855 |
Hanne Eknes Puntervoll1, Xiaohong R Yang, Hildegunn Høberg Vetti, Ingeborg M Bachmann, Marie Françoise Avril, Meriem Benfodda, Caterina Catricalà, Stéphane Dalle, Anne B Duval-Modeste, Paola Ghiorzo, Paola Grammatico, Mark Harland, Nicholas K Hayward, Hui-Han Hu, Thomas Jouary, Tanguy Martin-Denavit, Aija Ozola, Jane M Palmer, Lorenza Pastorino, Dace Pjanova, Nadem Soufir, Solrun J Steine, Alexander J Stratigos, Luc Thomas, Julie Tinat, Hensin Tsao, Ruta Veinalde, Margaret A Tucker, Brigitte Bressac-de Paillerets, Julia A Newton-Bishop, Alisa M Goldstein, Lars A Akslen, Anders Molven.
Abstract
BACKGROUND: CDKN2A and CDK4 are high risk susceptibility genes for cutaneous malignant melanoma. Melanoma families with CDKN2A germline mutations have been extensively characterised, whereas CDK4 families are rare and lack a systematic investigation of their phenotype.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23384855 PMCID: PMC3607098 DOI: 10.1136/jmedgenet-2012-101455
Source DB: PubMed Journal: J Med Genet ISSN: 0022-2593 Impact factor: 6.318
Overview of the studied melanoma families with CDK4 germline mutations
| Family designation | Laboratory number of family | Mutation | Subjects with verified cutaneous melanoma in pedigree | Total number of subjects with analysed DNA | Mutation positive family members | Mutation negative family members | Spouses | Reference |
|---|---|---|---|---|---|---|---|---|
| Norway-1 | – | Arg24His | 28 | 108 | 33 | 48 | 27 | |
| USA-1 | 8302 | Arg24Cys | 9 | 29 | 12 | 10 | 7 | |
| USA-2 | 8290 | Arg24Cys | 6 | 12 | 7 | 5 | 0 | |
| UK-1 | 301 | Arg24His | 4 | 5 | 2 | 2 | 1 | |
| UK-2 | 1119 | Arg24Cys | 5 | 7 | 4 | 3 | 0 | Unpublished |
| Latvia-1 | 247 | Arg24His | 5 | 5 | 2 | 3 | 0 | |
| Latvia-2 | 268 | Arg24His | 5 | 6 | 3 | 3 | 0 | |
| Latvia-3 | M679 | Arg24His | 5 | 3 | 2 | 0 | 1 | Unpublished |
| Australia-1 | 60007 | Arg24His | 10 | 3 | 2 | 0 | 1 | |
| Italy-1 | FM029 | Arg24His | 4 | 6 | 4 | 1 | 1 | |
| Italy-2 | 501153 | Arg24Cys | 1 | 2 | 1 | 1 | 0 | |
| France-1 | 759 | Arg24His | 6 | 14 | 9 | 3 | 2 | |
| France-2 | – | Arg24His | 2 | 4 | 3 | 0 | 1 | |
| France-3 | – | Arg24Cys | 2 | 1 | 1 | 0 | 0 | Unpublished |
| France-4 | 14648 | Arg24Cys | 3 | 1 | 1 | 0 | 0 | Unpublished |
| France-5 | – | Arg24His | 2 | 1 | 1 | 0 | 0 | Unpublished |
| Greece-1 | – | Arg24His | 6 | 2 | 2 | 0 | 0 | |
| Total | 103 | 209 | 89* | 79 | 41 |
*Sixty-two of the mutation positive family members had melanoma and 27 were unaffected.
Phenotypic and genotypic characteristics of melanoma cases in families with CDK4 germline mutations
| Variable* | Number | % |
|---|---|---|
| Sex (N=103) | ||
| Male | 44 | 42.7 |
| Female | 59 | 57.3 |
| Number of primary melanomas in affected subjects (N=103) | ||
| One | 60 | 58.3 |
| Multiple | 43 | 41.7 |
| Mean | 2.1 | – |
| Subjects (N=77) in R24H families | ||
| | 41 | 39.8 |
| | 0 | 0.0 |
| Obligate | 7 | 6.8 |
| Unknown mutation status† | 29 | 28.2 |
| Subjects (N=26) in R24C families | ||
| | 21 | 20.4 |
| | 0 | 0.0 |
| Obligate | 0 | 0.0 |
| Unknown mutation status† | 5 | 4.9 |
| Age at first melanoma diagnosis (N=95) | ||
| <30 years | 20 | 21.1 |
| 30–39 years | 30 | 31.6 |
| 40–49 years | 24 | 25.3 |
| 50–59 years | 14 | 14.7 |
| ≥60 years | 7 | 7.4 |
| Missing data‡ | 8 | – |
| Mean (years) | 40.4 | – |
| Median (years) | 39.0 | – |
| Anatomic location (N=140)§ | ||
| Head/neck | 31 | 22.1 |
| Limbs | 66 | 47.1 |
| Trunk | 43 | 30.7 |
| Missing data‡ | 28 | – |
| Anatomic location, first primary melanoma only (N=81) | ||
| Head/neck | 17 | 21.0 |
| Limbs | 34 | 42.0 |
| Trunk | 30 | 37.0 |
| Missing data‡ | 21 | – |
| Histologic type (N=95)§ | ||
| SSM | 71 | 74.7 |
| NM | 3 | 3.2 |
| LMM | 1 | 1.1 |
| In situ melanoma | 20 | 21.1 |
| Melanoma unclassified or classification unknown‡ | 73 | – |
| Histologic type, first primary melanoma only (N=48) | ||
| SSM | 34 | 70.8 |
| NM | 3 | 6.3 |
| LMM | 1 | 2.1 |
| In situ melanoma | 10 | 20.8 |
| Melanoma unclassified or classification unknown‡ | 54 | – |
*One melanoma case was recorded as MPM, but with no information on the actual number of melanomas. It was therefore excluded when calculating the mean number of melanomas and when summarising anatomic location and histologic type.
†DNA was not available for these cases.
‡Missing data are not included in the parentheses (N=) and not included when calculating percentages.
§For persons with MPM, information about the first three registered tumours was recorded.
LMM, lentigo malignant melanoma; MPM, multiple primary melanomas; NM, nodular melanoma; SSM, superficial spreading melanoma.
Occurrence of clinically atypical nevi in families with CDK4 germline mutations
| Affected | Unaffected | ||||
|---|---|---|---|---|---|
| Clinically atypical nevi* | N=49 (%) | N=50 (%) | p Value† | N=20 (%) | p Value† |
| Present | 13 (26.5) | 35 (70.0) | <0.001 | 15 (75.0) | <0.001 |
| Not present | 36 (73.5) | 15 (30.0) | 5 (25.0) | ||
*Data on CDK4 mutation status and clinically atypical nevi were available for 119 subjects.
†CDK4 negative family members were compared with affected and with unaffected CDK4 positive family members, respectively.
Frequencies of MC1R variants in families with CDK4 germline mutations
| Number of primary melanomas‡ | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Unaffected | Affected | SPM | MPM | ||||||
| N=115 (%) | N=23 (%) | p Value§ | N=60 (%) | p Value§ | p Value¶ | N=30 (%) | N=30 (%) | p Value** | |
| Number of | |||||||||
| 0 (consensus sequence) | 23 (20.0) | 10 (43.5) | 0.071 | 15 (25.0) | NS | NS | 11 (36.7) | 4 (13.3) | 0.070 |
| 1 variant | 71 (61.7) | 10 (43.5) | 32 (53.3) | 15 (50.0) | 17 (56.7) | ||||
| 2 variants | 21 (18.3) | 3 (13.0) | 13 (21.7) | 4 (13.3) | 9 (30.0) | ||||
| Type of | |||||||||
| 0 (consensus sequence) | 23 (20.0) | 10 (43.5) | 0.012 | 15 (25.0) | NS | 0.042 | 11 (36.7) | 4 (13.3) | 0.010 |
| RHC only | 48 (41.7) | 3 (13.0) | 23 (38.3) | 7 (23.3) | 16 (53.3) | ||||
| NRHC only | 31 (27.0) | 9 (39.1) | 14 (23.3) | 10 (33.3) | 4 (13.3) | ||||
| Both RHC and NRHC | 13 (11.3) | 1 (4.4) | 8 (13.3) | 2 (6.7) | 6 (20.0) | ||||
*MC1R data were available for 76 of 79 CDK4 negative family members and for 39 of 41 spouses. In these groups, the distributions of number and type of MC1R variants were very similar, and the two groups were combined into a single control group for the statistical analyses.
†Melanoma status and MC1R data were available for 83 of 89 CDK4 positive family members.
‡The number of primary melanomas and MC1R data were available for 60 of the 103 melanoma subjects.
§The control group was compared with unaffected and affected CDK4 positive family members, respectively.
¶Unaffected mutation carriers were compared with affected mutation carriers.
**Subjects with SPM and MPM were compared with each other with regard to MC1R variant distribution.
NS=non-significant p value.
MPM, multiple primary melanomas; NRHC, non-red hair colour; RHC, red hair colour; SPM, single primary melanoma.