Literature DB >> 23382418

Evolutionary epidemiology: preparing for an age of genomic plenty.

O G Pybus1, C Fraser, A Rambaut.   

Abstract

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Year:  2013        PMID： 23382418      PMCID： PMC3678320          DOI： 10.1098/rstb.2012.0193

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN： 0962-8436            Impact factor:   6.237


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  24 in total

1.  Multiple scales of selection influence the evolutionary emergence of novel pathogens.

Authors:  Miran Park; Claude Loverdo; Sebastian J Schreiber; James O Lloyd-Smith
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

2.  Uncovering epidemiological dynamics in heterogeneous host populations using phylogenetic methods.

Authors:  Tanja Stadler; Sebastian Bonhoeffer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

Review 3.  Bacterial genomes in epidemiology--present and future.

Authors:  Nicholas J Croucher; Simon R Harris; Yonatan H Grad; William P Hanage
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

Review 4.  Contrasting the epidemiological and evolutionary dynamics of influenza spatial transmission.

Authors:  Cécile Viboud; Martha I Nelson; Yi Tan; Edward C Holmes
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

5.  Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses.

Authors:  Cadhla Firth; Andrew Kitchen; Beth Shapiro; Marc A Suchard; Edward C Holmes; Andrew Rambaut
Journal:  Mol Biol Evol       Date:  2010-04-02       Impact factor: 16.240

Review 6.  Unifying the epidemiological and evolutionary dynamics of pathogens.

Authors:  Bryan T Grenfell; Oliver G Pybus; Julia R Gog; James L N Wood; Janet M Daly; Jenny A Mumford; Edward C Holmes
Journal:  Science       Date:  2004-01-16       Impact factor: 47.728

Review 7.  Observing micro-evolutionary processes of viral populations at multiple scales.

Authors:  Richard J Orton; Caroline F Wright; Marco J Morelli; Nicholas Juleff; Gaël Thébaud; Nick J Knowles; Begoña Valdazo-González; David J Paton; Donald P King; Daniel T Haydon
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

8.  Viral population analysis and minority-variant detection using short read next-generation sequencing.

Authors:  Simon J Watson; Matthijs R A Welkers; Daniel P Depledge; Eve Coulter; Judith M Breuer; Menno D de Jong; Paul Kellam
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

9.  Coalescent inference for infectious disease: meta-analysis of hepatitis C.

Authors:  Bethany Dearlove; Daniel J Wilson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237

10.  Modelling tree shape and structure in viral phylodynamics.

Authors:  Simon D W Frost; Erik M Volz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-02-04       Impact factor: 6.237
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  15 in total

1.  Host age modulates within-host parasite competition.

Authors:  Rony Izhar; Jarkko Routtu; Frida Ben-Ami
Journal:  Biol Lett       Date:  2015-05       Impact factor: 3.703

2.  Biannual birth pulses allow filoviruses to persist in bat populations.

Authors:  David T S Hayman
Journal:  Proc Biol Sci       Date:  2015-03-22       Impact factor: 5.349

3.  Phylodynamics of H5N1 Highly Pathogenic Avian Influenza in Europe, 2005-2010: Potential for Molecular Surveillance of New Outbreaks.

Authors:  Mohammad A Alkhamis; Brian R Moore; Andres M Perez
Journal:  Viruses       Date:  2015-06-23       Impact factor: 5.048

4.  Within-host dynamics of infection: from ecological insights to evolutionary predictions.

Authors:  Olivier Restif; Andrea L Graham
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-08-19       Impact factor: 6.237

5.  Deciphering the origins and tracking the evolution of cholera epidemics with whole-genome-based molecular epidemiology.

Authors:  Yonatan H Grad; Matthew K Waldor
Journal:  mBio       Date:  2013-09-10       Impact factor: 7.867

6.  HIV-1 transmission networks in a small world.

Authors:  Pleuni S Pennings; Susan P Holmes; Robert W Shafer
Journal:  J Infect Dis       Date:  2013-10-22       Impact factor: 5.226

7.  Applications of Bayesian Phylodynamic Methods in a Recent U.S. Porcine Reproductive and Respiratory Syndrome Virus Outbreak.

Authors:  Mohammad A Alkhamis; Andres M Perez; Michael P Murtaugh; Xiong Wang; Robert B Morrison
Journal:  Front Microbiol       Date:  2016-02-02       Impact factor: 5.640

8.  Novel approaches for Spatial and Molecular Surveillance of Porcine Reproductive and Respiratory Syndrome Virus (PRRSv) in the United States.

Authors:  Moh A Alkhamis; Andreia G Arruda; Robert B Morrison; Andres M Perez
Journal:  Sci Rep       Date:  2017-06-28       Impact factor: 4.379

9.  Molecular evolution in court: analysis of a large hepatitis C virus outbreak from an evolving source.

Authors:  Fernando González-Candelas; María Alma Bracho; Borys Wróbel; Andrés Moya
Journal:  BMC Biol       Date:  2013-07-19       Impact factor: 7.431

10.  Phylodynamic applications in 21st century global infectious disease research.

Authors:  Brittany D Rife; Carla Mavian; Xinguang Chen; Massimo Ciccozzi; Marco Salemi; Jae Min; Mattia Cf Prosperi
Journal:  Glob Health Res Policy       Date:  2017-05-08
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