| Literature DB >> 23365626 |
Johannes W Wehner1, Thisbe K Lindhorst.
Abstract
Deprotection of an N(α)-Fmoc-protected glycocysteine derivative 7 with an excess of morpholine unexpectedly led to the fluorenylmethyl-protected thioether 8 in high yield. The suggested mechanism for this reaction comprises the addition of the cysteine thiolate on the exocyclic double bond of dibenzofulvene, which is formed during Fmoc deprotection. The influence of base concentration on this transprotection reaction was studied.Entities:
Keywords: Fmoc protecting group; N-Fmoc→S-Fm transprotection; glycoamino acids; protecting groups
Year: 2012 PMID: 23365626 PMCID: PMC3555517 DOI: 10.3762/bjoc.8.242
Source DB: PubMed Journal: Beilstein J Org Chem ISSN: 1860-5397 Impact factor: 2.883
Scheme 1Synthesis of glycoamino acid derivative 3 and its dimer, from the known mannopyranoside 1.
Scheme 2To obtain the glycocystine derivative 3-dimer from the protected cysteine mannopyranoside precursor 4, the sequence of deprotection steps matters. When the thiol function was deprotected first to give 7, then N-Fmoc deprotection resulted in N-Fmoc→S-Fm transprotection. On the other hand, Fmoc deprotection was no problem starting from 4 with the thiol function protected.
Figure 1In the 1H/13C HMBC NMR spectrum of the S-Fm-protected glycoamino acid derivative 8, protecting-group rearrangement is confirmed by the cross peaks between C-β and the Fm-CH protons (in blue) and between Fm-CH and the H-βa,β protons (in red).
Scheme 3Proposed mechanism for the formation of S-Fm-protected 8 from N-Fmoc-protected 7 according to Rich and co-workers [16].
Product analysis of deprotection reactions under different basic reaction conditions.a
| Starting material/ used baseb | Products | ||
| 70% | |||
| 43% | 22% | 22%d | |
| 66% | 32% | – | |
| 47% | 46% | – | |
| 62% | 35% | – | |
| – | 93% | – | |
aOnly products obtained with yields >5% were isolated and analyzed;
breaction conditions: 7 (50 mg in dry DMF) was reacted at a concentration of 100 mM for 2 h at rt under a nitrogen atmosphere;
cthis reaction was carried out at a concentration of 57.5 mM;
dconfirmed by MALDI–TOF mass spectrometry;
e6 equiv morpholine at a concentration of 173 mM led to 77% 8 (see above).