Literature DB >> 23362960

DNA origami nanopillars as standards for three-dimensional superresolution microscopy.

Jürgen J Schmied1, Carsten Forthmann, Enrico Pibiri, Birka Lalkens, Philipp Nickels, Tim Liedl, Philip Tinnefeld.   

Abstract

Nanopillars are promising nanostructures composed of various materials that bring new functionalities for applications ranging from photovoltaics to analytics. We developed DNA nanopillars with a height of 220 nm and a diameter of ~14 nm using the DNA origami technique. Modifying the base of the nanopillars with biotins allowed selective, upright, and rigid immobilization on solid substrates. With the help of site-selective dye labels, we visualized the structure and determined the orientation of the nanopillars by three-dimensional fluorescence superresolution microscopy. Because of their rigidity and nanometer-precise addressability, DNA origami nanopillars qualify as scaffold for the assembly of plasmonic devices as well as for three-dimensional superresolution standards.

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Year:  2013        PMID: 23362960     DOI: 10.1021/nl304492y

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  16 in total

1.  Stepwise growth of surface-grafted DNA nanotubes visualized at the single-molecule level.

Authors:  Amani A Hariri; Graham D Hamblin; Yasser Gidi; Hanadi F Sleiman; Gonzalo Cosa
Journal:  Nat Chem       Date:  2015-02-23       Impact factor: 24.427

Review 2.  Quantitative 3D structured illumination microscopy of nuclear structures.

Authors:  Felix Kraus; Ezequiel Miron; Justin Demmerle; Tsotne Chitiashvili; Alexei Budco; Quentin Alle; Atsushi Matsuda; Heinrich Leonhardt; Lothar Schermelleh; Yolanda Markaki
Journal:  Nat Protoc       Date:  2017-04-13       Impact factor: 13.491

3.  Strong signal increase in STED fluorescence microscopy by imaging regions of subdiffraction extent.

Authors:  Fabian Göttfert; Tino Pleiner; Jörn Heine; Volker Westphal; Dirk Görlich; Steffen J Sahl; Stefan W Hell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

4.  DNA-Origami-Based Fluorescence Brightness Standards for Convenient and Fast Protein Counting in Live Cells.

Authors:  Nathan D Williams; Ane Landajuela; Ravi Kiran Kasula; Wenjiao Zhou; John T Powell; Zhiqun Xi; Farren J Isaacs; Julien Berro; Derek Toomre; Erdem Karatekin; Chenxiang Lin
Journal:  Nano Lett       Date:  2020-11-09       Impact factor: 11.189

5.  Nanometrology and super-resolution imaging with DNA.

Authors:  Elton Graugnard; William L Hughes; Ralf Jungmann; Mauri A Kostiainen; Veikko Linko
Journal:  MRS Bull       Date:  2017-12-08       Impact factor: 6.578

6.  DNA origami-based standards for quantitative fluorescence microscopy.

Authors:  Jürgen J Schmied; Mario Raab; Carsten Forthmann; Enrico Pibiri; Bettina Wünsch; Thorben Dammeyer; Philip Tinnefeld
Journal:  Nat Protoc       Date:  2014-05-15       Impact factor: 13.491

Review 7.  Nucleic Acid-Based Nanodevices in Biological Imaging.

Authors:  Kasturi Chakraborty; Aneesh T Veetil; Samie R Jaffrey; Yamuna Krishnan
Journal:  Annu Rev Biochem       Date:  2016-06-02       Impact factor: 23.643

8.  Polyhedra self-assembled from DNA tripods and characterized with 3D DNA-PAINT.

Authors:  Ryosuke Iinuma; Yonggang Ke; Ralf Jungmann; Thomas Schlichthaerle; Johannes B Woehrstein; Peng Yin
Journal:  Science       Date:  2014-03-13       Impact factor: 47.728

9.  Super-Resolution Imaging Conditions for enhanced Yellow Fluorescent Protein (eYFP) Demonstrated on DNA Origami Nanorulers.

Authors:  Ija Jusuk; Carolin Vietz; Mario Raab; Thorben Dammeyer; Philip Tinnefeld
Journal:  Sci Rep       Date:  2015-09-16       Impact factor: 4.379

10.  Choosing dyes for cw-STED nanoscopy using self-assembled nanorulers.

Authors:  Susanne Beater; Phil Holzmeister; Enrico Pibiri; Birka Lalkens; Philip Tinnefeld
Journal:  Phys Chem Chem Phys       Date:  2014-03-06       Impact factor: 3.676

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