Literature DB >> 23357850

Structural insight into substrate recognition by histone demethylase LSD2/KDM1b.

Fei Chen, Huirong Yang, Zhenghong Dong, Jian Fang, Ping Wang, Tingting Zhu, Wei Gong, Rui Fang, Yujiang Geno Shi, Ze Li, Yanhui Xu.   

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Year:  2013        PMID： 23357850      PMCID： PMC3567815          DOI： 10.1038/cr.2013.17

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  9 in total

Review 1.  Reversal of histone methylation: biochemical and molecular mechanisms of histone demethylases.

Authors:  Nima Mosammaparast; Yang Shi
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

Review 2.  The diverse functions of histone lysine methylation.

Authors:  Cyrus Martin; Yi Zhang
Journal:  Nat Rev Mol Cell Biol       Date:  2005-11       Impact factor: 94.444

3.  Structural basis of LSD1-CoREST selectivity in histone H3 recognition.

Authors:  Federico Forneris; Claudia Binda; Antonio Adamo; Elena Battaglioli; Andrea Mattevi
Journal:  J Biol Chem       Date:  2007-05-30       Impact factor: 5.157

4.  Human LSD2/KDM1b/AOF1 regulates gene transcription by modulating intragenic H3K4me2 methylation.

Authors:  Rui Fang; Andrew J Barbera; Yufei Xu; Michael Rutenberg; Thiago Leonor; Qing Bi; Fei Lan; Pinchao Mei; Guo-Cheng Yuan; Christine Lian; Junmin Peng; Dongmei Cheng; Guangchao Sui; Ursula B Kaiser; Yang Shi; Yujiang Geno Shi
Journal:  Mol Cell       Date:  2010-07-30       Impact factor: 17.970

5.  Histone demethylation mediated by the nuclear amine oxidase homolog LSD1.

Authors:  Yujiang Shi; Fei Lan; Caitlin Matson; Peter Mulligan; Johnathan R Whetstine; Philip A Cole; Robert A Casero; Yang Shi
Journal:  Cell       Date:  2004-12-29       Impact factor: 41.582

6.  A novel mammalian flavin-dependent histone demethylase.

Authors:  Aristotele Karytinos; Federico Forneris; Antonella Profumo; Giuseppe Ciossani; Elena Battaglioli; Claudia Binda; Andrea Mattevi
Journal:  J Biol Chem       Date:  2009-04-30       Impact factor: 5.157

7.  LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation.

Authors:  Rui Fang; Fei Chen; Zhenghong Dong; Di Hu; Andrew J Barbera; Erin A Clark; Jian Fang; Ying Yang; Pinchao Mei; Michael Rutenberg; Ze Li; Ying Zhang; Youwei Xu; Huirong Yang; Ping Wang; Matthew D Simon; Qiongjie Zhou; Jing Li; Mark P Marynick; Xiaotian Li; Haojie Lu; Ursula B Kaiser; Robert E Kingston; Yanhui Xu; Yujiang Geno Shi
Journal:  Mol Cell       Date:  2012-12-20       Impact factor: 17.970

8.  KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints.

Authors:  David N Ciccone; Hui Su; Sarah Hevi; Frédérique Gay; Hong Lei; Jeffrey Bajko; Guoliang Xu; En Li; Taiping Chen
Journal:  Nature       Date:  2009-09-02       Impact factor: 49.962

9.  AOF1 is a histone H3K4 demethylase possessing demethylase activity-independent repression function.

Authors:  Ze Yang; Jun Jiang; M David Stewart; David M Stewart; Shankang Qi; Kenichi Yamane; Jiwen Li; Yi Zhang; Jiemin Wong
Journal:  Cell Res       Date:  2010-01-26       Impact factor: 25.617
  9 in total
  14 in total

Review 1.  KDM1 class flavin-dependent protein lysine demethylases.

Authors:  Jonathan M Burg; Jennifer E Link; Brittany S Morgan; Frederick J Heller; Amanda E Hargrove; Dewey G McCafferty
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

2.  Uncovering the mechanistic basis for specific recognition of monomethylated H3K4 by the CW domain of Arabidopsis histone methyltransferase SDG8.

Authors:  Yanchao Liu; Ying Huang
Journal:  J Biol Chem       Date:  2018-03-01       Impact factor: 5.157

Review 3.  Chromatin dynamics: H3K4 methylation and H3 variant replacement during development and in cancer.

Authors:  Moonmoon Deb; Swayamsiddha Kar; Dipta Sengupta; Arunima Shilpi; Sabnam Parbin; Sandip K Rath; Vedang A Londhe; Samir Kumar Patra
Journal:  Cell Mol Life Sci       Date:  2014-03-28       Impact factor: 9.261

Review 4.  Histone lysine specific demethylase 1 inhibitors.

Authors:  Samir Mehndiratta; Jing-Ping Liou
Journal:  RSC Med Chem       Date:  2020-07-31

Review 5.  Histone lysine demethylases as targets for anticancer therapy.

Authors:  Jonas W Højfeldt; Karl Agger; Kristian Helin
Journal:  Nat Rev Drug Discov       Date:  2013-11-15       Impact factor: 84.694

6.  A rationally-designed chimeric KDM1A/KDM1B histone demethylase tower domain deletion mutant retaining enzymatic activity.

Authors:  Jonathan M Burg; Alan T Makhoul; Charles W Pemble; Jennifer E Link; Frederick J Heller; Dewey G McCafferty
Journal:  FEBS Lett       Date:  2015-07-29       Impact factor: 4.124

7.  Lysine-Specific Demethylase 1A (KDM1A/LSD1): Product Recognition and Kinetic Analysis of Full-Length Histones.

Authors:  Jonathan M Burg; Julie J Gonzalez; Kenneth R Maksimchuk; Dewey G McCafferty
Journal:  Biochemistry       Date:  2016-02-09       Impact factor: 3.162

Review 8.  Structural insight into inhibitors of flavin adenine dinucleotide-dependent lysine demethylases.

Authors:  Hideaki Niwa; Takashi Umehara
Journal:  Epigenetics       Date:  2017-02-10       Impact factor: 4.528

9.  Lysine-specific histone demethylase 1B (LSD2/KDM1B) represses p53 expression to promote proliferation and inhibit apoptosis in colorectal cancer through LSD2-mediated H3K4me2 demethylation.

Authors:  Shaoxin Cai; Jinsi Wang; Wei Zeng; Xuefei Cheng; Lihang Liu; Weihua Li
Journal:  Aging (Albany NY)       Date:  2020-07-29       Impact factor: 5.682

Review 10.  Histone demethylases in chromatin biology and beyond.

Authors:  Emilia Dimitrova; Anne H Turberfield; Robert J Klose
Journal:  EMBO Rep       Date:  2015-11-12       Impact factor: 8.807
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