Literature DB >> 23357359

FTIR spectroscopic imaging of protein aggregation in living cells.

Lisa M Miller1, Megan W Bourassa, Randy J Smith.   

Abstract

Protein misfolding and aggregation are the hallmark of a number of diseases including Alzheimer's disease, Parkinson's disease, Huntington's disease, amyotrophic lateral sclerosis, and the prion diseases. In all cases, a naturally-occurring protein misfolds and forms aggregates that are thought to disrupt cell function through a wide range of mechanisms that are yet to be fully unraveled. Fourier transform infrared (FTIR) spectroscopy is a technique that is sensitive to the secondary structure of proteins and has been widely used to investigate the process of misfolding and aggregate formation. This review focuses on how FTIR spectroscopy and spectroscopic microscopy are being used to evaluate the structural changes in disease-related proteins both in vitro and directly within cells and tissues. Finally, ongoing technological advances will be presented that are enabling time-resolved FTIR imaging of protein aggregation directly within living cells, which can provide insight into the structural intermediates, time scale, and mechanisms of cell toxicity associated with aggregate formation. This article is part of a Special Issue entitled: FTIR in membrane proteins and peptide studies.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Amyloid; Fourier transform infrared (FTIR) spectroscopy; Microspectroscopy; Protein aggregation; Protein secondary structure

Mesh:

Substances:

Year:  2013        PMID: 23357359      PMCID: PMC3722250          DOI: 10.1016/j.bbamem.2013.01.014

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  58 in total

1.  Experimental ATR device for real-time FTIR imaging of living cells using brilliant synchrotron radiation sources.

Authors:  Cestelli-Guidi Mariangela; Yao Seydou; Sali Diego; Castano Sabine; Marcelli Augusto; Cyril Petibois
Journal:  Biotechnol Adv       Date:  2011-12-09       Impact factor: 14.227

2.  Experimental evidence for the reorganization of beta-strands within aggregates of the Abeta(16-22) peptide.

Authors:  Sarah A Petty; Sean M Decatur
Journal:  J Am Chem Soc       Date:  2005-10-05       Impact factor: 15.419

Review 3.  FTIR-microspectroscopy of prion-infected nervous tissue.

Authors:  Ariane Kretlow; Qi Wang; Janina Kneipp; Peter Lasch; Michael Beekes; Lisa Miller; Dieter Naumann
Journal:  Biochim Biophys Acta       Date:  2006-06-07

Review 4.  A mechanistic link between oxidative stress and membrane mediated amyloidogenesis revealed by infrared spectroscopy.

Authors:  Hiroaki Komatsu; Liu Liu; Ian V J Murray; Paul H Axelsen
Journal:  Biochim Biophys Acta       Date:  2007-06-07

Review 5.  Quantitative studies of the structure of proteins in solution by Fourier-transform infrared spectroscopy.

Authors:  J L Arrondo; A Muga; J Castresana; F M Goñi
Journal:  Prog Biophys Mol Biol       Date:  1993       Impact factor: 3.667

Review 6.  Opinion: What is the role of protein aggregation in neurodegeneration?

Authors:  Christopher A Ross; Michelle A Poirier
Journal:  Nat Rev Mol Cell Biol       Date:  2005-11       Impact factor: 94.444

7.  Changes in protein structure and distribution observed at pre-clinical stages of scrapie pathogenesis.

Authors:  Ariane Kretlow; Qi Wang; Michael Beekes; Dieter Naumann; Lisa M Miller
Journal:  Biochim Biophys Acta       Date:  2008-06-14

8.  Amyloid plaques in PSAPP mice bind less metal than plaques in human Alzheimer's disease.

Authors:  Andreana C Leskovjan; Antonio Lanzirotti; Lisa M Miller
Journal:  Neuroimage       Date:  2009-05-28       Impact factor: 6.556

9.  Initiation and elongation in fibrillation of ALS-linked superoxide dismutase.

Authors:  Madhuri Chattopadhyay; Armando Durazo; Se Hui Sohn; Cynthia D Strong; Edith B Gralla; Julian P Whitelegge; Joan Selverstone Valentine
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-20       Impact factor: 11.205

10.  Variation in aggregation propensities among ALS-associated variants of SOD1: correlation to human disease.

Authors:  Mercedes Prudencio; P John Hart; David R Borchelt; Peter M Andersen
Journal:  Hum Mol Genet       Date:  2009-05-30       Impact factor: 6.150

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  51 in total

1.  Misfolded opsin mutants display elevated β-sheet structure.

Authors:  Lisa M Miller; Megan Gragg; Tae Gyun Kim; Paul S-H Park
Journal:  FEBS Lett       Date:  2015-09-07       Impact factor: 4.124

2.  Dissociation of β-Sheet Stacking of Amyloid β Fibrils by Irradiation of Intense, Short-Pulsed Mid-infrared Laser.

Authors:  Takayasu Kawasaki; Toyonari Yaji; Toshiaki Ohta; Koichi Tsukiyama; Kazuhiro Nakamura
Journal:  Cell Mol Neurobiol       Date:  2018-02-05       Impact factor: 5.046

3.  X-ray-Based Techniques to Study the Nano-Bio Interface.

Authors:  Carlos Sanchez-Cano; Ramon A Alvarez-Puebla; John M Abendroth; Tobias Beck; Robert Blick; Yuan Cao; Frank Caruso; Indranath Chakraborty; Henry N Chapman; Chunying Chen; Bruce E Cohen; Andre L C Conceição; David P Cormode; Daxiang Cui; Kenneth A Dawson; Gerald Falkenberg; Chunhai Fan; Neus Feliu; Mingyuan Gao; Elisabetta Gargioni; Claus-C Glüer; Florian Grüner; Moustapha Hassan; Yong Hu; Yalan Huang; Samuel Huber; Nils Huse; Yanan Kang; Ali Khademhosseini; Thomas F Keller; Christian Körnig; Nicholas A Kotov; Dorota Koziej; Xing-Jie Liang; Beibei Liu; Sijin Liu; Yang Liu; Ziyao Liu; Luis M Liz-Marzán; Xiaowei Ma; Andres Machicote; Wolfgang Maison; Adrian P Mancuso; Saad Megahed; Bert Nickel; Ferdinand Otto; Cristina Palencia; Sakura Pascarelli; Arwen Pearson; Oula Peñate-Medina; Bing Qi; Joachim Rädler; Joseph J Richardson; Axel Rosenhahn; Kai Rothkamm; Michael Rübhausen; Milan K Sanyal; Raymond E Schaak; Heinz-Peter Schlemmer; Marius Schmidt; Oliver Schmutzler; Theo Schotten; Florian Schulz; A K Sood; Kathryn M Spiers; Theresa Staufer; Dominik M Stemer; Andreas Stierle; Xing Sun; Gohar Tsakanova; Paul S Weiss; Horst Weller; Fabian Westermeier; Ming Xu; Huijie Yan; Yuan Zeng; Ying Zhao; Yuliang Zhao; Dingcheng Zhu; Ying Zhu; Wolfgang J Parak
Journal:  ACS Nano       Date:  2021-03-02       Impact factor: 15.881

4.  Label-free imaging of fibroblast membrane interfaces and protein signatures with vibrational infrared photothermal and phase signals.

Authors:  Panagis D Samolis; Daniel Langley; Breanna M O'Reilly; Zay Oo; Geva Hilzenrat; Shyamsunder Erramilli; Allyson E Sgro; Sally McArthur; Michelle Y Sander
Journal:  Biomed Opt Express       Date:  2020-12-14       Impact factor: 3.732

Review 5.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

Authors:  Francois-Xavier Theillet; Andres Binolfi; Tamara Frembgen-Kesner; Karan Hingorani; Mohona Sarkar; Ciara Kyne; Conggang Li; Peter B Crowley; Lila Gierasch; Gary J Pielak; Adrian H Elcock; Anne Gershenson; Philipp Selenko
Journal:  Chem Rev       Date:  2014-06-05       Impact factor: 60.622

6.  Characterization of Protein Structural Changes in Living Cells Using Time-Lapsed FTIR Imaging.

Authors:  Paul Gelfand; Randy J Smith; Eli Stavitski; David R Borchelt; Lisa M Miller
Journal:  Anal Chem       Date:  2015-05-28       Impact factor: 6.986

7.  A new method to image heme-Fe, total Fe, and aggregated protein levels after intracerebral hemorrhage.

Authors:  Mark J Hackett; Mauren DeSouza; Sally Caine; Brian Bewer; Helen Nichol; Phyllis G Paterson; Frederick Colbourne
Journal:  ACS Chem Neurosci       Date:  2015-03-02       Impact factor: 4.418

8.  Physicochemical characterisation of kafirins extracted from sorghum grain and dried distillers grain with solubles related to their biomaterial functionality.

Authors:  Umar Shah; Deepak Dwivedi; Mark Hackett; Hani Al-Salami; Ranjeet P Utikar; Chris Blanchard; Adil Gani; Matthew R Rowles; Stuart K Johnson
Journal:  Sci Rep       Date:  2021-07-26       Impact factor: 4.379

9.  Novel bio-spectroscopic imaging reveals disturbed protein homeostasis and thiol redox with protein aggregation prior to hippocampal CA1 pyramidal neuron death induced by global brain ischemia in the rat.

Authors:  Mark J Hackett; Shari E Smith; Sally Caine; Helen Nichol; Graham N George; Ingrid J Pickering; Phyllis G Paterson
Journal:  Free Radic Biol Med       Date:  2015-10-09       Impact factor: 7.376

Review 10.  Insight of brain degenerative protein modifications in the pathology of neurodegeneration and dementia by proteomic profiling.

Authors:  Sunil S Adav; Siu Kwan Sze
Journal:  Mol Brain       Date:  2016-11-03       Impact factor: 4.041

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