Literature DB >> 23347296

Quantum-chemical studies on the favored and rare tautomers of neutral and redox adenine.

Ewa D Raczyńska1, Mariusz Makowski, Katarzyna Zientara-Rytter, Katarzyna Kolczyńska, Tomasz M Stępniewski, Małgorzata Hallmann.   

Abstract

All possible twenty-three prototropic tautomers of neutral and redox adenine (nine amine and fourteen imine forms, including geometric isomerism of the exo ═NH group) were examined in vacuo {DFT(B3LYP)/6-311+G(d,p)}. The NH → NH conversions as well as those usually omitted, NH → CH and CH → CH, were considered. An interesting change of the tautomeric preference occurs when proceeding from neutral to reduced adenine. One-electron reduction favors the nonaromatic amine C8H-N10H tautomer. This tautomeric preference is similar to that (C2H) for reduced imidazole. Water molecules (PCM model) seem to not change this trend. They influence solely the relative energies. The DFT vertical detachment energy in the gas phase is positive for each tautomer, e.g., 0.03 eV for N9H-N10H and 1.84 eV for C8H-N10H. The DFT adiabatic electron affinity for the favored process, neutral N9H-N10H → reduced C8H-N10H (ground states), is equal to 0.18 eV at 0 K (ZPE included). One-electron oxidation does not change the tautomeric preference in the gas phase. The aromatic amine N9H-N10H tautomer is favored for the oxidized molecule similarly as for the neutral one. The DFT adiabatic ionization potential for the favored process, neutral N9H-N10H → oxidized N9H-N10H (ground states), is equal to 8.12 eV at 0 K (ZPE included). Water molecules (PCM model) seem to influence solely the composition of the tautomeric mixture and the relative energies. They change the energies of the oxidation and reduction processes by ca. 2 eV.

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Year:  2013        PMID: 23347296     DOI: 10.1021/jp3081029

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  7 in total

1.  Geometric consequences of electron delocalization for adenine tautomers in aqueous solution.

Authors:  Ewa D Raczyńska; Mariusz Makowski
Journal:  J Mol Model       Date:  2014-05-15       Impact factor: 1.810

2.  The influence of isolated and penta-hydrated Zn2+ on some of the intramolecular proton-transfer processes of thymine: a quantum chemical study.

Authors:  Dejie Li; Ying Han; Huijuan Li; Ping Zhang; Qi Kang; Zhihua Li; Dazhong Shen
Journal:  RSC Adv       Date:  2018-03-20       Impact factor: 4.036

3.  Variations of the tautomeric preferences and π-electron delocalization for the neutral and redox forms of purine when proceeding from the gas phase (DFT) to water (PCM).

Authors:  Ewa D Raczyńska; Beata Kamińska
Journal:  J Mol Model       Date:  2013-07-07       Impact factor: 1.810

4.  Impact of the Substituents on the Electronic Structure of the Four Most Stable Tautomers of Purine and Their Adenine Analogues.

Authors:  Anna Jezuita; Halina Szatylowicz; Tadeusz M Krygowski
Journal:  ACS Omega       Date:  2020-05-12

5.  Substituent effects on the stability of the four most stable tautomers of adenine and purine.

Authors:  Halina Szatylowicz; Anna Jezuita; Paulina H Marek; Tadeusz M Krygowski
Journal:  RSC Adv       Date:  2019-10-02       Impact factor: 3.361

6.  Effects of ionization on stability of 1-methylcytosine - DFT and PCM studies.

Authors:  Ewa D Raczyńska; Piotr Michalec; Marcin Zalewski; Mariusz Sapuła
Journal:  J Mol Model       Date:  2016-06-03       Impact factor: 1.810

7.  Effect of the Solvent and Substituent on Tautomeric Preferences of Amine-Adenine Tautomers.

Authors:  Anna Jezuita; Paweł Andrzej Wieczorkiewicz; Halina Szatylowicz; Tadeusz Marek Krygowski
Journal:  ACS Omega       Date:  2021-07-12
  7 in total

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