Literature DB >> 23341615

Structure of ADP-aluminium fluoride-stabilized protochlorophyllide oxidoreductase complex.

Jürgen Moser1, Christiane Lange, Joern Krausze, Johannes Rebelein, Wolf-Dieter Schubert, Markus W Ribbe, Dirk W Heinz, Dieter Jahn.   

Abstract

Photosynthesis uses chlorophylls for the conversion of light into chemical energy, the driving force of life on Earth. During chlorophyll biosynthesis in photosynthetic bacteria, cyanobacteria, green algae and gymnosperms, dark-operative protochlorophyllide oxidoreductase (DPOR), a nitrogenase-like metalloenzyme, catalyzes the chemically challenging two-electron reduction of the fully conjugated ring system of protochlorophyllide a. The reduction of the C-17=C-18 double bond results in the characteristic ring architecture of all chlorophylls, thereby altering the absorption properties of the molecule and providing the basis for light-capturing and energy-transduction processes of photosynthesis. We report the X-ray crystallographic structure of the substrate-bound, ADP-aluminium fluoride-stabilized (ADP·AlF(3)-stabilized) transition state complex between the DPOR components L(2) and (NB)(2) from the marine cyanobacterium Prochlorococcus marinus. Our analysis permits a thorough investigation of the dynamic interplay between L(2) and (NB)(2). Upon complex formation, substantial ATP-dependent conformational rearrangements of L(2) trigger the protein-protein interactions with (NB)(2) as well as the electron transduction via redox-active [4Fe-4S] clusters. We also present the identification of artificial "small-molecule substrates" of DPOR in correlation with those of nitrogenase. The catalytic differences and similarities between DPOR and nitrogenase have broad implications for the energy transduction mechanism of related multiprotein complexes that are involved in the reduction of chemically stable double and/or triple bonds.

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Year:  2013        PMID: 23341615      PMCID: PMC3568340          DOI: 10.1073/pnas.1218303110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

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2.  Mechanism of Molybdenum Nitrogenase.

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3.  Toward the structural genomics of complexes: crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis.

Authors:  Michael Strong; Michael R Sawaya; Shuishu Wang; Martin Phillips; Duilio Cascio; David Eisenberg
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Review 4.  Making light work of enzyme catalysis: protochlorophyllide oxidoreductase.

Authors:  Derren J Heyes; C Neil Hunter
Journal:  Trends Biochem Sci       Date:  2005-09-21       Impact factor: 13.807

5.  Structure of ADP x AIF4(-)-stabilized nitrogenase complex and its implications for signal transduction.

Authors:  H Schindelin; C Kisker; J L Schlessman; J B Howard; D C Rees
Journal:  Nature       Date:  1997-05-22       Impact factor: 49.962

6.  Protochlorophyllide reduction: a key step in the greening of plants.

Authors:  Y Fujita
Journal:  Plant Cell Physiol       Date:  1996-06       Impact factor: 4.927

7.  Integration, scaling, space-group assignment and post-refinement.

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8.  A new bioinformatics analysis tools framework at EMBL-EBI.

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9.  FeMo cofactor synthesis by a nifH mutant with altered MgATP reactivity.

Authors:  N Gavini; B K Burgess
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

10.  Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase with MgADP bound: a homologue of the nitrogenase Fe protein.

Authors:  Ranjana Sarma; Brett M Barney; Trinity L Hamilton; Alma Jones; Lance C Seefeldt; John W Peters
Journal:  Biochemistry       Date:  2008-12-09       Impact factor: 3.162

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  18 in total

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2.  ATP-dependent substrate reduction at an [Fe8S9] double-cubane cluster.

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Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

3.  Iron-sulfur cluster-dependent catalysis of chlorophyllide a oxidoreductase from Roseobacter denitrificans.

Authors:  Svenja Kiesel; Denise Wätzlich; Christiane Lange; Edward Reijerse; Markus J Bröcker; Wolfhart Rüdiger; Wolfgang Lubitz; Hugo Scheer; Jürgen Moser; Dieter Jahn
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4.  Broadened Substrate Specificity of 3-Hydroxyethyl Bacteriochlorophyllide a Dehydrogenase (BchC) Indicates a New Route for the Biosynthesis of Bacteriochlorophyll a.

Authors:  Christiane Lange; Svenja Kiesel; Sabine Peters; Simone Virus; Hugo Scheer; Dieter Jahn; Jürgen Moser
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5.  Structural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.

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Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-29       Impact factor: 12.779

6.  Substrate recognition induces sequential electron transfer across subunits in the nitrogenase-like DPOR complex.

Authors:  Elliot I Corless; Brian Bennett; Edwin Antony
Journal:  J Biol Chem       Date:  2020-07-31       Impact factor: 5.157

Review 7.  Nitrogenase and homologs.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  J Biol Inorg Chem       Date:  2014-12-10       Impact factor: 3.358

8.  Solution NMR structures provide first structural coverage of the large protein domain family PF08369 and complementary structural coverage of dark operative protochlorophyllide oxidoreductase complexes.

Authors:  Surya V S R K Pulavarti; Yunfen He; Erik A Feldmann; Alexander Eletsky; Thomas B Acton; Rong Xiao; John K Everett; Gaetano T Montelione; Michael A Kennedy; Thomas Szyperski
Journal:  J Struct Funct Genomics       Date:  2013-08-21

9.  Extracellular Vesicle-Mediated Secretion of Protochlorophyllide in the Cyanobacterium Leptolyngbya boryana.

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Journal:  Plants (Basel)       Date:  2022-03-29

Review 10.  Evolutionary Aspects and Regulation of Tetrapyrrole Biosynthesis in Cyanobacteria under Aerobic and Anaerobic Environments.

Authors:  Yuichi Fujita; Ryoma Tsujimoto; Rina Aoki
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