Literature DB >> 23340208

Double strand breaks: hurdles for RNA polymerase II transcription?

Tibor Pankotai1, Evi Soutoglou.   

Abstract

DNA lesions pose a physical obstacle to DNA-dependent cellular transactions such as replication and transcription. A great deal is known regarding RNA polymerase II (RNAP II) transcription stalling in the presence of lesions induced by UV, but recent studies have uncovered previously uncharacterized behavior of the RNAP II machinery in the presence of double strand breaks (DSBs). These new data, although contradictory, contribute to our understanding of a vital cellular mechanism that defends against the production of aberrant transcripts and protects cell viability.

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Year:  2013        PMID: 23340208      PMCID: PMC3644041          DOI: 10.4161/trns.22879

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  39 in total

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Authors:  Xianming Mo; William S Dynan
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

2.  BRCA1/BARD1 inhibition of mRNA 3' processing involves targeted degradation of RNA polymerase II.

Authors:  Frida E Kleiman; Foon Wu-Baer; Danae Fonseca; Syuzo Kaneko; Richard Baer; James L Manley
Journal:  Genes Dev       Date:  2005-05-15       Impact factor: 11.361

3.  Ring1b-mediated H2A ubiquitination associates with inactive X chromosomes and is involved in initiation of X inactivation.

Authors:  Jia Fang; Taiping Chen; Brian Chadwick; En Li; Yi Zhang
Journal:  J Biol Chem       Date:  2004-10-26       Impact factor: 5.157

Review 4.  RNA polymerase encounters with DNA damage: transcription-coupled repair or transcriptional mutagenesis?

Authors:  Tina T Saxowsky; Paul W Doetsch
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

5.  RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair.

Authors:  C P Selby; R Drapkin; D Reinberg; A Sancar
Journal:  Nucleic Acids Res       Date:  1997-02-15       Impact factor: 16.971

6.  BRCA1/BARD1 ubiquitinate phosphorylated RNA polymerase II.

Authors:  Lea M Starita; Andrew A Horwitz; Michael-Christopher Keogh; Chikashi Ishioka; Jeffrey D Parvin; Natsuko Chiba
Journal:  J Biol Chem       Date:  2005-05-10       Impact factor: 5.157

7.  The ATM repair pathway inhibits RNA polymerase I transcription in response to chromosome breaks.

Authors:  Michael Kruhlak; Elizabeth E Crouch; Marika Orlov; Carolina Montaño; Stanislaw A Gorski; André Nussenzweig; Tom Misteli; Robert D Phair; Rafael Casellas
Journal:  Nature       Date:  2007-06-07       Impact factor: 49.962

8.  RETRACTED: Cockayne syndrome A and B proteins differentially regulate recruitment of chromatin remodeling and repair factors to stalled RNA polymerase II in vivo.

Authors:  Maria Fousteri; Wim Vermeulen; Albert A van Zeeland; Leon H F Mullenders
Journal:  Mol Cell       Date:  2006-08       Impact factor: 17.970

9.  HP1alpha recruitment to DNA damage by p150CAF-1 promotes homologous recombination repair.

Authors:  Céline Baldeyron; Gaston Soria; Danièle Roche; Adam J L Cook; Geneviève Almouzni
Journal:  J Cell Biol       Date:  2011-04-04       Impact factor: 10.539

10.  Heterochromatin is refractory to gamma-H2AX modification in yeast and mammals.

Authors:  Jung-Ae Kim; Michael Kruhlak; Farokh Dotiwala; André Nussenzweig; James E Haber
Journal:  J Cell Biol       Date:  2007-07-16       Impact factor: 10.539

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  11 in total

Review 1.  Patching Broken DNA: Nucleosome Dynamics and the Repair of DNA Breaks.

Authors:  Ozge Gursoy-Yuzugullu; Nealia House; Brendan D Price
Journal:  J Mol Biol       Date:  2015-11-26       Impact factor: 5.469

2.  A critical role for topoisomerase IIb and DNA double strand breaks in transcription.

Authors:  Stuart K Calderwood
Journal:  Transcription       Date:  2016-04-21

Review 3.  The tale of a tail: histone H4 acetylation and the repair of DNA breaks.

Authors:  Surbhi Dhar; Ozge Gursoy-Yuzugullu; Ramya Parasuram; Brendan D Price
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

4.  Identification of RECQ1-regulated transcriptome uncovers a role of RECQ1 in regulation of cancer cell migration and invasion.

Authors:  Xiao Ling Li; Xing Lu; Swetha Parvathaneni; Sven Bilke; Hongen Zhang; Saravanabhavan Thangavel; Alessandro Vindigni; Toshifumi Hara; Yuelin Zhu; Paul S Meltzer; Ashish Lal; Sudha Sharma
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

5.  Human p53 interacts with the elongating RNAPII complex and is required for the release of actinomycin D induced transcription blockage.

Authors:  Barbara N Borsos; Ildikó Huliák; Hajnalka Majoros; Zsuzsanna Ujfaludi; Ákos Gyenis; Peter Pukler; Imre M Boros; Tibor Pankotai
Journal:  Sci Rep       Date:  2017-01-19       Impact factor: 4.379

6.  Proteomic identification of histone post-translational modifications and proteins enriched at a DNA double-strand break.

Authors:  Pingping Wang; Stephanie Byrum; Faith C Fowler; Sangita Pal; Alan J Tackett; Jessica K Tyler
Journal:  Nucleic Acids Res       Date:  2017-11-02       Impact factor: 16.971

7.  Splicing stimulates siRNA formation at Drosophila DNA double-strand breaks.

Authors:  Karin Merk; Marco Breinig; Romy Böttcher; Stefan Krebs; Helmut Blum; Michael Boutros; Klaus Förstemann
Journal:  PLoS Genet       Date:  2017-06-19       Impact factor: 5.917

Review 8.  Loss of Genome Fidelity: Beta HPVs and the DNA Damage Response.

Authors:  Sebastian O Wendel; Nicholas A Wallace
Journal:  Front Microbiol       Date:  2017-11-15       Impact factor: 5.640

9.  WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

Authors:  Pierre Caron; Tibor Pankotai; Wouter W Wiegant; Maxim A X Tollenaere; Audrey Furst; Celine Bonhomme; Angela Helfricht; Anton de Groot; Albert Pastink; Alfred C O Vertegaal; Martijn S Luijsterburg; Evi Soutoglou; Haico van Attikum
Journal:  Genes Dev       Date:  2019-05-02       Impact factor: 11.361

Review 10.  Non-Coding RNA: Sequence-Specific Guide for Chromatin Modification and DNA Damage Signaling.

Authors:  Sofia Francia
Journal:  Front Genet       Date:  2015-11-13       Impact factor: 4.599

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