Literature DB >> 23337534

Regulatory mechanisms of long noncoding RNAs in vertebrate central nervous system development and function.

J L Knauss1, T Sun.   

Abstract

Long noncoding RNAs (lncRNAs) have emerged as an important class of molecules that regulate gene expression at epigenetic, transcriptional, and post-transcriptional levels through a wide array of mechanisms. This regulation is of particular importance in the central nervous system (CNS), where precise modulation of gene expression is required for proper neuronal and glial production, connection and function. There are relatively few functional studies that characterize lncRNA mechanisms, but possible functions can often be inferred based on existing examples and the lncRNA's relative genomic position. In this review, we will discuss mechanisms of lncRNAs as predicted by genomic contexts and the possible impact on CNS development, function, and disease pathogenesis. There is no doubt that investigation of the mechanistic role of lncRNAs will open a new and exciting direction in studying CNS development and function.
Copyright © 2013 IBRO. Published by Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23337534      PMCID: PMC3595319          DOI: 10.1016/j.neuroscience.2013.01.022

Source DB:  PubMed          Journal:  Neuroscience        ISSN: 0306-4522            Impact factor:   3.590


  155 in total

1.  Emx2 promotes symmetric cell divisions and a multipotential fate in precursors from the cerebral cortex.

Authors:  N Heins; F Cremisi; P Malatesta; R M Gangemi; G Corte; J Price; G Goudreau; P Gruss; M Götz
Journal:  Mol Cell Neurosci       Date:  2001-11       Impact factor: 4.314

2.  The long noncoding RNA Vax2os1 controls the cell cycle progression of photoreceptor progenitors in the mouse retina.

Authors:  Nicola Meola; Mariateresa Pizzo; Giovanna Alfano; Enrico Maria Surace; Sandro Banfi
Journal:  RNA       Date:  2011-11-29       Impact factor: 4.942

Review 3.  Long noncoding RNAs in cell biology.

Authors:  Michael B Clark; John S Mattick
Journal:  Semin Cell Dev Biol       Date:  2011-01-20       Impact factor: 7.727

4.  Overexpression of the long non-coding RNA MEG3 impairs in vitro glioma cell proliferation.

Authors:  Pengjun Wang; Zhongqiao Ren; Piyun Sun
Journal:  J Cell Biochem       Date:  2012-06       Impact factor: 4.429

5.  Dynamic developmental regulation of the large non-coding RNA associated with the mouse 7C imprinted chromosomal region.

Authors:  Elodie Le Meur; Françoise Watrin; Miguel Landers; Rachel Sturny; Marc Lalande; Françoise Muscatelli
Journal:  Dev Biol       Date:  2005-08-29       Impact factor: 3.582

6.  Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation.

Authors:  Tim R Mercer; Irfan A Qureshi; Solen Gokhan; Marcel E Dinger; Guangyu Li; John S Mattick; Mark F Mehler
Journal:  BMC Neurosci       Date:  2010-02-05       Impact factor: 3.288

7.  Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase.

Authors:  Mohammad Ali Faghihi; Farzaneh Modarresi; Ahmad M Khalil; Douglas E Wood; Barbara G Sahagan; Todd E Morgan; Caleb E Finch; Georges St Laurent; Paul J Kenny; Claes Wahlestedt
Journal:  Nat Med       Date:  2008-06-29       Impact factor: 53.440

8.  On an autosomal dominant form of retinal-cerebellar degeneration: an autopsy study of five patients in one family.

Authors:  J J Martin; N Van Regemorter; L Krols; J M Brucher; T de Barsy; H Szliwowski; P Evrard; C Ceuterick; M J Tassignon; H Smet-Dieleman
Journal:  Acta Neuropathol       Date:  1994       Impact factor: 17.088

9.  The transcriptional landscape of the mammalian genome.

Authors:  P Carninci; T Kasukawa; S Katayama; J Gough; M C Frith; N Maeda; R Oyama; T Ravasi; B Lenhard; C Wells; R Kodzius; K Shimokawa; V B Bajic; S E Brenner; S Batalov; A R R Forrest; M Zavolan; M J Davis; L G Wilming; V Aidinis; J E Allen; A Ambesi-Impiombato; R Apweiler; R N Aturaliya; T L Bailey; M Bansal; L Baxter; K W Beisel; T Bersano; H Bono; A M Chalk; K P Chiu; V Choudhary; A Christoffels; D R Clutterbuck; M L Crowe; E Dalla; B P Dalrymple; B de Bono; G Della Gatta; D di Bernardo; T Down; P Engstrom; M Fagiolini; G Faulkner; C F Fletcher; T Fukushima; M Furuno; S Futaki; M Gariboldi; P Georgii-Hemming; T R Gingeras; T Gojobori; R E Green; S Gustincich; M Harbers; Y Hayashi; T K Hensch; N Hirokawa; D Hill; L Huminiecki; M Iacono; K Ikeo; A Iwama; T Ishikawa; M Jakt; A Kanapin; M Katoh; Y Kawasawa; J Kelso; H Kitamura; H Kitano; G Kollias; S P T Krishnan; A Kruger; S K Kummerfeld; I V Kurochkin; L F Lareau; D Lazarevic; L Lipovich; J Liu; S Liuni; S McWilliam; M Madan Babu; M Madera; L Marchionni; H Matsuda; S Matsuzawa; H Miki; F Mignone; S Miyake; K Morris; S Mottagui-Tabar; N Mulder; N Nakano; H Nakauchi; P Ng; R Nilsson; S Nishiguchi; S Nishikawa; F Nori; O Ohara; Y Okazaki; V Orlando; K C Pang; W J Pavan; G Pavesi; G Pesole; N Petrovsky; S Piazza; J Reed; J F Reid; B Z Ring; M Ringwald; B Rost; Y Ruan; S L Salzberg; A Sandelin; C Schneider; C Schönbach; K Sekiguchi; C A M Semple; S Seno; L Sessa; Y Sheng; Y Shibata; H Shimada; K Shimada; D Silva; B Sinclair; S Sperling; E Stupka; K Sugiura; R Sultana; Y Takenaka; K Taki; K Tammoja; S L Tan; S Tang; M S Taylor; J Tegner; S A Teichmann; H R Ueda; E van Nimwegen; R Verardo; C L Wei; K Yagi; H Yamanishi; E Zabarovsky; S Zhu; A Zimmer; W Hide; C Bult; S M Grimmond; R D Teasdale; E T Liu; V Brusic; J Quackenbush; C Wahlestedt; J S Mattick; D A Hume; C Kai; D Sasaki; Y Tomaru; S Fukuda; M Kanamori-Katayama; M Suzuki; J Aoki; T Arakawa; J Iida; K Imamura; M Itoh; T Kato; H Kawaji; N Kawagashira; T Kawashima; M Kojima; S Kondo; H Konno; K Nakano; N Ninomiya; T Nishio; M Okada; C Plessy; K Shibata; T Shiraki; S Suzuki; M Tagami; K Waki; A Watahiki; Y Okamura-Oho; H Suzuki; J Kawai; Y Hayashizaki
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

10.  DISC1 Pathway in Brain Development: Exploring Therapeutic Targets for Major Psychiatric Disorders.

Authors:  Atsushi Kamiya; Thomas W Sedlak; Mikhail V Pletnikov
Journal:  Front Psychiatry       Date:  2012-03-22       Impact factor: 4.157

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  59 in total

Review 1.  LncRNAs: emerging players in gene regulation and disease pathogenesis.

Authors:  Mina Kazemzadeh; Reza Safaralizadeh; Ayla Valinezhad Orang
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

Review 2.  Long noncoding RNA and its contribution to autism spectrum disorders.

Authors:  Jie Tang; Yizhen Yu; Wei Yang
Journal:  CNS Neurosci Ther       Date:  2017-06-20       Impact factor: 5.243

3.  Long noncoding RNA lncKdm2b: A critical player in the maintenance of group 3 innate lymphoid cells.

Authors:  Can-Jie Guo; Weici Zhang; M Eric Gershwin
Journal:  Cell Mol Immunol       Date:  2017-07-10       Impact factor: 11.530

4.  Microdeletion of pseudogene chr14.232.a affects LRFN5 expression in cells of a patient with autism spectrum disorder.

Authors:  Gerarda Cappuccio; Sergio Attanasio; Marianna Alagia; Margherita Mutarelli; Roberta Borzone; Marianthi Karali; Rita Genesio; Angela Mormile; Lucio Nitsch; Floriana Imperati; Annalisa Esposito; Sandro Banfi; Ennio Del Giudice; Nicola Brunetti-Pierri
Journal:  Eur J Hum Genet       Date:  2019-05-31       Impact factor: 4.246

5.  Identification of linc-NeD125, a novel long non coding RNA that hosts miR-125b-1 and negatively controls proliferation of human neuroblastoma cells.

Authors:  Valeria Bevilacqua; Ubaldo Gioia; Valerio Di Carlo; Anna F Tortorelli; Teresa Colombo; Irene Bozzoni; Pietro Laneve; Elisa Caffarelli
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 6.  Transcriptional regulation of long-term potentiation.

Authors:  Nicola Bliim; Iryna Leshchyns'ka; Vladimir Sytnyk; Michael Janitz
Journal:  Neurogenetics       Date:  2016-06-18       Impact factor: 2.660

7.  Identification and characterization of long noncoding RNA in Paulownia tomentosa treated with methyl methane sulfonate.

Authors:  Zhe Wang; Bingbing Li; Yongsheng Li; Xiaoqiao Zhai; Yanpeng Dong; Minjie Deng; Zhenli Zhao; Yabing Cao; Guoqiang Fan
Journal:  Physiol Mol Biol Plants       Date:  2018-02-08

8.  CASC15-S Is a Tumor Suppressor lncRNA at the 6p22 Neuroblastoma Susceptibility Locus.

Authors:  Mike R Russell; Annalise Penikis; Derek A Oldridge; Juan R Alvarez-Dominguez; Lee McDaniel; Maura Diamond; Olivia Padovan; Pichai Raman; Yimei Li; Jun S Wei; Shile Zhang; Janahan Gnanchandran; Robert Seeger; Shahab Asgharzadeh; Javed Khan; Sharon J Diskin; John M Maris; Kristina A Cole
Journal:  Cancer Res       Date:  2015-06-22       Impact factor: 12.701

9.  lncRNA expression in the auditory forebrain during postnatal development.

Authors:  Yan Guo; Pan Zhang; Quanhu Sheng; Shilin Zhao; Troy A Hackett
Journal:  Gene       Date:  2016-08-18       Impact factor: 3.688

Review 10.  Emerging epigenetic mechanisms of long non-coding RNAs.

Authors:  K Schaukowitch; T-K Kim
Journal:  Neuroscience       Date:  2013-12-14       Impact factor: 3.590

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