Literature DB >> 23333622

Metamorphic protein IscU alternates conformations in the course of its role as the scaffold protein for iron-sulfur cluster biosynthesis and delivery.

John L Markley1, Jin Hae Kim, Ziqi Dai, Jameson R Bothe, Kai Cai, Ronnie O Frederick, Marco Tonelli.   

Abstract

IscU from Escherichia coli, the scaffold protein for iron-sulfur cluster biosynthesis and delivery, populates a complex energy landscape. IscU exists as two slowly interconverting species: one (S) is largely structured with all four peptidyl-prolyl bonds trans; the other (D) is partly disordered but contains an ordered domain that stabilizes two cis peptidyl-prolyl peptide bonds. At pH 8.0, the S-state is maximally populated at 25 °C, but its population decreases at higher or lower temperatures or at lower pH. The D-state binds preferentially to the cysteine desulfurase (IscS), which generates and transfers sulfur to IscU cysteine residues to form persulfides. The S-state is stabilized by Fe-S cluster binding and interacts preferentially with the DnaJ-type co-chaperone (HscB), which targets the holo-IscU:HscB complex to the DnaK-type chaperone (HscA) in its ATP-bound from. HscA is involved in delivery of Fe-S clusters to acceptor proteins by a mechanism dependent on ATP hydrolysis. Upon conversion of ATP to ADP, HscA binds the D-state of IscU ensuring release of the cluster and HscB. These findings have led to a more complete model for cluster biosynthesis and delivery.
Copyright © 2013 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23333622      PMCID: PMC3960074          DOI: 10.1016/j.febslet.2013.01.003

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  44 in total

1.  The Fe/S assembly protein IscU behaves as a substrate for the molecular chaperone Hsc66 from Escherichia coli.

Authors:  J J Silberg; K G Hoff; T L Tapley; L E Vickery
Journal:  J Biol Chem       Date:  2000-10-26       Impact factor: 5.157

2.  Transfer of sulfur from IscS to IscU during Fe/S cluster assembly.

Authors:  H D Urbina; J J Silberg; K G Hoff; L E Vickery
Journal:  J Biol Chem       Date:  2001-09-27       Impact factor: 5.157

3.  Iron-sulfur cluster biosynthesis: characterization of Schizosaccharomyces pombe Isa1.

Authors:  Gong Wu; Sheref S Mansy; Craig Hemann; Russ Hille; Kristene K Surerus; J A Cowan
Journal:  J Biol Inorg Chem       Date:  2002-02-13       Impact factor: 3.358

Review 4.  Iron-sulfur proteins: ancient structures, still full of surprises.

Authors:  H Beinert
Journal:  J Biol Inorg Chem       Date:  2000-02       Impact factor: 3.358

5.  Crystal structure of IscS, a cysteine desulfurase from Escherichia coli.

Authors:  Jill R Cupp-Vickery; Hugo Urbina; Larry E Vickery
Journal:  J Mol Biol       Date:  2003-07-25       Impact factor: 5.469

6.  Iron-sulfur cluster biosynthesis. Kinetic analysis of [2Fe-2S] cluster transfer from holo ISU to apo Fd: role of redox chemistry and a conserved aspartate.

Authors:  Shu-Pao Wu; Gong Wu; Kristene K Surerus; J A Cowan
Journal:  Biochemistry       Date:  2002-07-16       Impact factor: 3.162

7.  Contributions of the LPPVK motif of the iron-sulfur template protein IscU to interactions with the Hsc66-Hsc20 chaperone system.

Authors:  Kevin G Hoff; Jill R Cupp-Vickery; Larry E Vickery
Journal:  J Biol Chem       Date:  2003-07-17       Impact factor: 5.157

8.  A software tool for the prediction of Xaa-Pro peptide bond conformations in proteins based on 13C chemical shift statistics.

Authors:  Mario Schubert; Dirk Labudde; Hartmut Oschkinat; Peter Schmieder
Journal:  J Biomol NMR       Date:  2002-10       Impact factor: 2.835

Review 9.  Iron-sulfur cluster biosynthesis: toward an understanding of cellular machinery and molecular mechanism.

Authors:  Sheref S Mansy; J A Cowan
Journal:  Acc Chem Res       Date:  2004-09       Impact factor: 22.384

10.  Thermotoga maritima IscU. Structural characterization and dynamics of a new class of metallochaperone.

Authors:  Ivano Bertini; J A Cowan; Cristina Del Bianco; Claudio Luchinat; Sheref S Mansy
Journal:  J Mol Biol       Date:  2003-08-22       Impact factor: 5.469

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  45 in total

1.  Atypical effect of temperature tuning on the insertion of the catalytic iron-sulfur center in a recombinant [FeFe]-hydrogenase.

Authors:  Simone Morra; Alessandro Cordara; Gianfranco Gilardi; Francesca Valetti
Journal:  Protein Sci       Date:  2015-09-24       Impact factor: 6.725

2.  Functional implications of the interaction between HscB and IscU in the biosynthesis of FeS clusters.

Authors:  Stefania Iametti; Alberto Barbiroli; Francesco Bonomi
Journal:  J Biol Inorg Chem       Date:  2015-08-06       Impact factor: 3.358

3.  Accessory NUMM (NDUFS6) subunit harbors a Zn-binding site and is essential for biogenesis of mitochondrial complex I.

Authors:  Katarzyna Kmita; Christophe Wirth; Judith Warnau; Sergio Guerrero-Castillo; Carola Hunte; Gerhard Hummer; Ville R I Kaila; Klaus Zwicker; Ulrich Brandt; Volker Zickermann
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

Review 4.  Tangled web of interactions among proteins involved in iron-sulfur cluster assembly as unraveled by NMR, SAXS, chemical crosslinking, and functional studies.

Authors:  Jin Hae Kim; Jameson R Bothe; T Reid Alderson; John L Markley
Journal:  Biochim Biophys Acta       Date:  2014-11-22

Review 5.  How Do J-Proteins Get Hsp70 to Do So Many Different Things?

Authors:  Elizabeth A Craig; Jaroslaw Marszalek
Journal:  Trends Biochem Sci       Date:  2017-03-15       Impact factor: 13.807

6.  Molecular Mechanism of ISC Iron-Sulfur Cluster Biogenesis Revealed by High-Resolution Native Mass Spectrometry.

Authors:  Cheng-Wei Lin; Jacob W McCabe; David H Russell; David P Barondeau
Journal:  J Am Chem Soc       Date:  2020-03-17       Impact factor: 15.419

7.  The IR-¹⁵N-HSQC-AP experiment: a new tool for NMR spectroscopy of paramagnetic molecules.

Authors:  Simone Ciofi-Baffoni; Angelo Gallo; Riccardo Muzzioli; Mario Piccioli
Journal:  J Biomol NMR       Date:  2014-01-11       Impact factor: 2.835

8.  Regulation of human Nfu activity in Fe-S cluster delivery-characterization of the interaction between Nfu and the HSPA9/Hsc20 chaperone complex.

Authors:  Christine Wachnowsky; Yushi Liu; Taejin Yoon; J A Cowan
Journal:  FEBS J       Date:  2017-12-29       Impact factor: 5.542

9.  Fe-S cluster biogenesis in Gram-positive bacteria: SufU is a zinc-dependent sulfur transfer protein.

Authors:  Bruna P Selbach; Alexander H Chung; Aubrey D Scott; Simon J George; Stephen P Cramer; Patricia C Dos Santos
Journal:  Biochemistry       Date:  2013-12-23       Impact factor: 3.162

10.  Frataxin-bypassing Isu1: characterization of the bypass activity in cells and mitochondria.

Authors:  Heeyong Yoon; Simon A B Knight; Alok Pandey; Jayashree Pain; Yan Zhang; Debkumar Pain; Andrew Dancis
Journal:  Biochem J       Date:  2014-04-01       Impact factor: 3.857

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