Literature DB >> 23329456

Purification of DNA/RNA in a microfluidic device.

Andy Fan1, Samantha Byrnes, Catherine Klapperich.   

Abstract

Often, modern diagnostic techniques require the isolation and purification of nucleic acids directly from patient samples such as blood or stool. Many diagnostic tests are being miniaturized onto micro-sized platforms and integrated into microfluidic devices due to the economies resulting from smaller sample and reagent volumes. Often, these devices perform sample preparation in series with the diagnostic tests. The sample preparation steps are vital in order to purify the desired genetic material from potential inhibitors that can interfere with the outcome of the test. There are various techniques used to selectively capture the nucleic acids while washing away potential contamination (proteins, enzymes, lipids, etc.). Two of the most common forms of selective capture are based on nucleic acid binding to silica surface or on the precipitation of nucleic acids with or without the presence of a carrier species. Each of these methods can be performed in liquid phase or in a solid support such as an extraction column. Here we discuss both methods and address microfluidic applications.

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Year:  2013        PMID: 23329456      PMCID: PMC4451820          DOI: 10.1007/978-1-62703-134-9_25

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

1.  Sensitive ribonuclease protection assay employing glycogen as a carrier and a single inactivation/precipitation step.

Authors:  S Harju; K R Peterson
Journal:  Biotechniques       Date:  2001-06       Impact factor: 1.993

2.  Toward a microchip-based solid-phase extraction method for isolation of nucleic acids.

Authors:  Kelley A Wolfe; Michael C Breadmore; Jerome P Ferrance; Mary E Power; John F Conroy; Pamela M Norris; James P Landers
Journal:  Electrophoresis       Date:  2002-03       Impact factor: 3.535

3.  Microchip-based purification of DNA from biological samples.

Authors:  Michael C Breadmore; Kelley A Wolfe; Imee G Arcibal; Wayne K Leung; Dana Dickson; Braden C Giordano; Mary E Power; Jerome P Ferrance; Sanford H Feldman; Pamela M Norris; James P Landers
Journal:  Anal Chem       Date:  2003-04-15       Impact factor: 6.986

4.  Chip-based solid-phase extraction pretreatment for direct electrospray mass spectrometry analysis using an array of monolithic columns in a polymeric substrate.

Authors:  Aimin Tan; Salete Benetton; Jack D Henion
Journal:  Anal Chem       Date:  2003-10-15       Impact factor: 6.986

5.  RNA isolation from mammalian cells using porous polymer monoliths: an approach for high-throughput automation.

Authors:  Anirban Chatterjee; Paul L Mirer; Elvira Zaldivar Santamaria; Catherine Klapperich; Andre Sharon; Alexis F Sauer-Budge
Journal:  Anal Chem       Date:  2010-06-01       Impact factor: 6.986

6.  Rapid and simple method for purification of nucleic acids.

Authors:  R Boom; C J Sol; M M Salimans; C L Jansen; P M Wertheim-van Dillen; J van der Noordaa
Journal:  J Clin Microbiol       Date:  1990-03       Impact factor: 5.948

7.  An automated micro-solid phase extraction device involving integrated \high-pressure microvalves for genetic sample preparation.

Authors:  Song-I Han; Ki-Ho Han; A Bruno Frazier; Jerome P Ferrance; James P Landers
Journal:  Biomed Microdevices       Date:  2009-08       Impact factor: 2.838

8.  An inexpensive and simple method for DNA purifications on silica particles.

Authors:  M J Carter; I D Milton
Journal:  Nucleic Acids Res       Date:  1993-02-25       Impact factor: 16.971

9.  The single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction: twenty-something years on.

Authors:  Piotr Chomczynski; Nicoletta Sacchi
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

10.  Thermoplastic microfluidic device for on-chip purification of nucleic acids for disposable diagnostics.

Authors:  Arpita Bhattacharyya; Catherine M Klapperich
Journal:  Anal Chem       Date:  2006-02-01       Impact factor: 6.986

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  3 in total

1.  An investigation into simplifying total RNA extraction with minimal equipment using a low volume, electrokinetically driven microfluidic protocol.

Authors:  Kiara Lee; Anubhav Tripathi
Journal:  Biomicrofluidics       Date:  2022-08-16       Impact factor: 3.258

2.  Paper-based molecular diagnostic for Chlamydia trachomatis.

Authors:  Jacqueline C Linnes; Andy Fan; Natalia M Rodriguez; Bertrand Lemieux; Huimin Kong; Catherine M Klapperich
Journal:  RSC Adv       Date:  2014-01-01       Impact factor: 3.361

3.  Allele-Specific Recombinase Polymerase Amplification to Detect Sickle Cell Disease in Low-Resource Settings.

Authors:  Mary E Natoli; Megan M Chang; Kathryn A Kundrod; Jackson B Coole; Gladstone E Airewele; Venée N Tubman; Rebecca R Richards-Kortum
Journal:  Anal Chem       Date:  2021-03-10       Impact factor: 6.986

  3 in total

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